University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Spinal cord layer 8 T9 left


Abbreviation
SCL8T9
Color       
Superior regionsIntermediate zone T9

SynonymsAbbr.Language
Spinal cord layer 8 T9SCL8T9Eng

Output to

NameSideAbbr.WeightDetails
Lateral periaqueductal grayipsiLPAG1
Ventrolateral periaqueductal grayipsiVLPAG2
Posterior lobe of the cerebellumipsiCERCPL1
Ansiform lobule crus 1ipsiCrus10.5
Simple lobuleipsiSim0.5
Anterior lobeipsiAnL3
Paravermal region of anterior lobeipsiPVAnL0.5
Reticular systemipsiRF-0.5
Medial pontomedullary reticular formationipsiMPomRF-0.5
Pontine reticular nucleus oral partipsiPnO1
Parabrachial nucleusipsiPB-0.5
Lateral parabrachial nucleus lateral partipsiLPBL1
Parabrachial nucleus central lateral partipsiPBCeL0
Parabrachial nucleus dorsolateral partipsiPBDL0
Parabrachial nucleus superior lateralipsiPBSL0
Gigantocellular reticular nucleusipsiGi1
Lateral reticular nucleusipsiLRt1
Subnucleus reticularis ventralis medullae oblongataeipsiSRV-0.5
Medullary reticular nucleus dorsal partipsiMdDd-0.5
Spinal vestibular nucleusipsiSpVe-0.5
Vestibular nucleiipsiVnc1
Nucleus of the solitary tractipsiSol-0.5
Raphe pallidus nucleusipsiRPa1
Inferior olive dorsal nucleusipsiIOD1
Paragigantocellular reticular nucleusipsiPGi1
Lateral paragigantocellular nucleusipsiLPGi-0.5
HypothalamusipsiHYPO1
Lateral hypothalamic areaipsiLH-0.5
Posterior hypothalamic areaipsiPHA-0.5
Ventrobasal complexipsiVB-0.5
Ventral posterolateral thalamic nucleusipsiVPL-0.5
Ventral posteromedial thalamic nucleusipsiVPM-0.5
Central amygdaloid nucleus anterior partipsiCeAn-0.5
Cervical segment 1ipsiCS12
Cervical segment 2ipsiCS22
Cervical segment 3ipsiCS32
Cervical segment 4ipsiCS42
Cervical segment 5ipsiCS52
Cervical segment 6ipsiCS62
Cervical segment 7ipsiCS72
Spinal cord layer 9 C7ipsiSCL9C7-0.5
Cervical segment 8ipsiCS82
Thoracal segment 1ipsiT12
Thoracal segment 2ipsiT22
Thoracal segment 3ipsiT32
Thoracal segment 4ipsiT42
Area X T4ipsiSCL10T4-0.5
Spinal cord layer 5 T4ipsiSCL5T4-0.5
Spinal cord layer 6 T4ipsiSCL6T4-0.5
Spinal cord layer 3 T4ipsiSCL3T4-0.5
Spinal cord layer 4 T4ipsiSCL4T4-0.5
Spinal cord layer 7 T4ipsiSCL7T4-0.5
Spinal cord layer 8 T4ipsiSCL8T4-0.5
Spinal cord layer 9 T4ipsiSCL9T4-0.5
Thoracal segment 5ipsiT52
Area X T5ipsiSCL10T5-0.5
Spinal cord layer 5 T5ipsiSCL5T5-0.5
Spinal cord layer 6 T5ipsiSCL6T5-0.5
Spinal cord layer 3 T5ipsiSCL3T5-0.5
Spinal cord layer 4 T5ipsiSCL4T5-0.5
Spinal cord layer 7 T5ipsiSCL7T5-0.5
Spinal cord layer 8 T5ipsiSCL8T5-0.5
Spinal cord layer 9 T5ipsiSCL9T5-0.5
Thoracal segment 6ipsiT62
Area X T6ipsiSCL10T6-0.5
Spinal cord layer 5 T6ipsiSCL5T6-0.5
Spinal cord layer 6 T6ipsiSCL6T6-0.5
Spinal cord layer 3 T6ipsiSCL3T6-0.5
Spinal cord layer 4 T6ipsiSCL4T6-0.5
Spinal cord layer 7 T6ipsiSCL7T6-0.5
Spinal cord layer 8 T6ipsiSCL8T6-0.5
Spinal cord layer 9 T6ipsiSCL9T6-0.5
Thoracal segment 7ipsiT72
Area X T7ipsiSCL10T7-0.5
Spinal cord layer 5 T7ipsiSCL5T7-0.5
Spinal cord layer 6 T7ipsiSCL6T7-0.5
Spinal cord layer 3 T7ipsiSCL3T7-0.5
Spinal cord layer 4 T7ipsiSCL4T7-0.5
Spinal cord layer 7 T7ipsiSCL7T7-0.5
Spinal cord layer 8 T7ipsiSCL8T7-0.5
Spinal cord layer 9 T7ipsiSCL9T7-0.5
Thoracal segment 8ipsiT82
Area X T8ipsiSCL10T8-0.5
Spinal cord layer 5 T8ipsiSCL5T8-0.5
Spinal cord layer 6 T8ipsiSCL6T8-0.5
Spinal cord layer 3 T8ipsiSCL3T8-0.5
Spinal cord layer 4 T8ipsiSCL4T8-0.5
Spinal cord layer 7 T8ipsiSCL7T8-0.5
Spinal cord layer 8 T8ipsiSCL8T8-0.5
Spinal cord layer 9 T8ipsiSCL9T8-0.5
Thoracal segment 9ipsiT92
Thoracal segment 10ipsiT102
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 5 T10ipsiSCL5T10-0.5
Spinal cord layer 6 T10ipsiSCL6T10-0.5
Spinal cord layer 3 T10ipsiSCL3T10-0.5
Spinal cord layer 4 T10ipsiSCL4T10-0.5
Spinal cord layer 7 T10ipsiSCL7T10-0.5
Spinal cord layer 8 T10ipsiSCL8T10-0.5
Spinal cord layer 9 T10ipsiSCL9T10-0.5
Thoracal segment 11ipsiT112
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 5 T11ipsiSCL5T11-0.5
Spinal cord layer 6 T11ipsiSCL6T11-0.5
Spinal cord layer 3 T11ipsiSCL3T11-0.5
Spinal cord layer 4 T11ipsiSCL4T11-0.5
Spinal cord layer 7 T11ipsiSCL7T11-0.5
Spinal cord layer 8 T11ipsiSCL8T11-0.5
Spinal cord layer 9 T11ipsiSCL9T11-0.5
Thoracal segment 12ipsiT122
Area X T12ipsiSCL10T12-0.5
Spinal cord layer 5 T12ipsiSCL5T12-0.5
Spinal cord layer 6 T12ipsiSCL6T12-0.5
Spinal cord layer 3 T12ipsiSCL3T12-0.5
Spinal cord layer 4 T12ipsiSCL4T12-0.5
Spinal cord layer 7 T12ipsiSCL7T12-0.5
Spinal cord layer 8 T12ipsiSCL8T12-0.5
Spinal cord layer 9 T12ipsiSCL9T12-0.5
Thoracal segment 13ipsiT132
Area X T13ipsiSCL10T13-0.5
Spinal cord layer 5 T13ipsiSCL5T13-0.5
Spinal cord layer 6 T13ipsiSCL6T13-0.5
Spinal cord layer 3 T13ipsiSCL3T13-0.5
Spinal cord layer 4 T13ipsiSCL4T13-0.5
Spinal cord layer 7 T13ipsiSCL7T13-0.5
Spinal cord layer 8 T13ipsiSCL8T13-0.5
Spinal cord layer 9 T13ipsiSCL9T13-0.5
Lumbar segment 1ipsiL12
Area X L1ipsiSCL10L1-0.5
Spinal cord layer 5 L1ipsiSCL5L1-0.5
Spinal cord layer 6 L1ipsiSCL6L1-0.5
Spinal cord layer 3 L1ipsiSCL3L1-0.5
Spinal cord layer 4 L1ipsiSCL4L1-0.5
Spinal cord layer 7 L1ipsiSCL7L1-0.5
Spinal cord layer 8 L1ipsiSCL8L1-0.5
Spinal cord layer 9 L1ipsiSCL9L1-0.5
Lumbar segment 2ipsiL22
Lumbar segment 3ipsiL32
Lumbar segment 4ipsiL42
Area X L4ipsiSCL10L41
Spinal cord layer 8 L4ipsiSCL8L41
Lumbar segment 5ipsiL52
Lumbar segment 6ipsiL62
Sacral segment 1ipsiSa12
Sacral segment 2ipsiSa22
Sacral segment 3ipsiSa32
Sacral segment 4ipsiSa42
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Ventrolateral periaqueductal graycontraVLPAG3
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Superior colliculus deep layerscontraSCd-0.5
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Ansiform lobule crus 1contraCrus10.5
Simple lobulecontraSim0.5
Anterior lobecontraAnL1
Paravermal region of anterior lobecontraPVAnL0.5
Pontine reticular nucleus oral partcontraPnO3
Lateral parabrachial nucleus lateral partcontraLPBL1
Parabrachial nucleus central lateral partcontraPBCeL1
Parabrachial nucleus dorsolateral partcontraPBDL1
Parabrachial nucleus superior lateralcontraPBSL1
Gigantocellular reticular nucleuscontraGi3
Gigantocellular reticular nucleus lateral partcontraGirL3
Lateral reticular nucleuscontraLRt3
Subnucleus reticularis ventralis medullae oblongataecontraSRV-0.5
Spinal vestibular nucleuscontraSpVe-0.5
Vestibular nucleicontraVnc3
Raphe pallidus nucleuscontraRPa1
Inferior olive dorsal nucleuscontraIOD3
Paragigantocellular reticular nucleuscontraPGi3
Lateral paragigantocellular nucleuscontraLPGi-0.5
Paragigantocellular reticular nucleus medial partcontraPGiM-0.5
HypothalamuscontraHYPO3
Ventrobasal complexcontraVB-0.5
Ventral posterolateral thalamic nucleuscontraVPL-0.5
Ventral posteromedial thalamic nucleuscontraVPM-0.5
Pretectal regioncontraPRT-0.5
Lateral funiculuscontralf-2
Cervical segment 1contraCS11.5
Cervical segment 2contraCS21.5
Cervical segment 3contraCS31.5
Cervical segment 4contraCS41.5
Cervical segment 5contraCS51.5
Cervical segment 6contraCS61.5
Cervical segment 7contraCS71.5
Spinal cord layer 9 C7contraSCL9C7-0.5
Cervical segment 8contraCS81.5
Thoracal segment 1contraT11.5
Thoracal segment 2contraT21.5
Thoracal segment 3contraT31.5
Thoracal segment 4contraT41.5
Thoracal segment 5contraT51.5
Thoracal segment 6contraT61.5
Thoracal segment 7contraT71.5
Thoracal segment 8contraT81.5
Thoracal segment 9contraT91.5
Thoracal segment 10contraT101.5
Thoracal segment 11contraT111.5
Thoracal segment 12contraT121.5
Thoracal segment 13contraT131.5
Lumbar segment 1contraL11.5
Lumbar segment 2contraL21.5
Lumbar segment 3contraL31.5
Lumbar segment 4contraL41.5
Area X L4contraSCL10L41
Spinal cord layer 8 L4contraSCL8L41
Lumbar segment 5contraL51.5
Lumbar segment 6contraL61.5
Sacral segment 1contraSa11.5
Sacral segment 2contraSa21.5
Sacral segment 3contraSa31.5
Sacral segment 4contraSa41.5
StomachipsiOrgsStomS-1
Femoral bone marrowipsiOrgSkFemM-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
A5 noradrenaline cellsipsiA52
Locus coeruleusipsiLC3
Caudal part of ventral locus coeruleusipsiLCveca3
Medial reticular formationipsiRFm-0.5
Ventrolateral reticular formationipsiVLRF-0.5
Mesencephalic reticular formationipsiMRF-0.5
Pontine reticular nucleusipsiPRN3
Dorsolateral pontine reticular formationipsiPRNDL1
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus caudal partipsiPNC3
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus medial partipsiGiM-0.5
Gigantocellular reticular nucleus rostral partipsiGiRo-0.5
Subcoeruleus nucleusipsiSubC3
Mesencephalic trigeminal nucleusipsiMe5-0.5
Spinal vestibular nucleusipsiSpVe-0.5
Medial vestibular nucleusipsiMVe-0.5
Lateral vestibular nucleusipsiLVe-0.5
Raphe magnus nucleusipsiRMg-0.5
Rostral part of the ventromedial medulla oblongataipsiRMeObvm2
Lateral hypothalamic areaipsiLH1
Paraventricular hypothalamic nucleusipsiPa0.5
Zona incerta rostromedial partipsiZIrm0
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm1
Primary somatosensory cortexipsiS11
Secondary somatosensory cortexipsiS21
Area X T4ipsiSCL10T4-0.5
Spinal cord layer 5 T4ipsiSCL5T4-0.5
Spinal cord layer 6 T4ipsiSCL6T4-0.5
Spinal cord layer 3 T4ipsiSCL3T4-0.5
Spinal cord layer 4 T4ipsiSCL4T4-0.5
Spinal cord layer 1 T4ipsiSCL1T4-0.5
Spinal cord layer 2 T4ipsiSCL2T4-0.5
Spinal cord layer 7 T4ipsiSCL7T4-0.5
Spinal cord layer 8 T4ipsiSCL8T4-0.5
Area X T5ipsiSCL10T5-0.5
Spinal cord layer 5 T5ipsiSCL5T5-0.5
Spinal cord layer 6 T5ipsiSCL6T5-0.5
Spinal cord layer 3 T5ipsiSCL3T5-0.5
Spinal cord layer 4 T5ipsiSCL4T5-0.5
Spinal cord layer 1 T5ipsiSCL1T5-0.5
Spinal cord layer 2 T5ipsiSCL2T5-0.5
Spinal cord layer 7 T5ipsiSCL7T5-0.5
Spinal cord layer 8 T5ipsiSCL8T5-0.5
Area X T6ipsiSCL10T6-0.5
Spinal cord layer 5 T6ipsiSCL5T6-0.5
Spinal cord layer 6 T6ipsiSCL6T6-0.5
Spinal cord layer 3 T6ipsiSCL3T6-0.5
Spinal cord layer 4 T6ipsiSCL4T6-0.5
Spinal cord layer 1 T6ipsiSCL1T6-0.5
Spinal cord layer 2 T6ipsiSCL2T6-0.5
Spinal cord layer 7 T6ipsiSCL7T6-0.5
Spinal cord layer 8 T6ipsiSCL8T6-0.5
Area X T7ipsiSCL10T7-0.5
Spinal cord layer 5 T7ipsiSCL5T7-0.5
Spinal cord layer 6 T7ipsiSCL6T7-0.5
Spinal cord layer 3 T7ipsiSCL3T7-0.5
Spinal cord layer 4 T7ipsiSCL4T7-0.5
Spinal cord layer 1 T7ipsiSCL1T7-0.5
Spinal cord layer 2 T7ipsiSCL2T7-0.5
Spinal cord layer 7 T7ipsiSCL7T7-0.5
Spinal cord layer 8 T7ipsiSCL8T7-0.5
Area X T8ipsiSCL10T8-0.5
Spinal cord layer 5 T8ipsiSCL5T8-0.5
Spinal cord layer 6 T8ipsiSCL6T8-0.5
Spinal cord layer 3 T8ipsiSCL3T8-0.5
Spinal cord layer 4 T8ipsiSCL4T8-0.5
Spinal cord layer 1 T8ipsiSCL1T8-0.5
Spinal cord layer 2 T8ipsiSCL2T8-0.5
Spinal cord layer 7 T8ipsiSCL7T8-0.5
Spinal cord layer 8 T8ipsiSCL8T8-0.5
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 5 T10ipsiSCL5T10-0.5
Spinal cord layer 6 T10ipsiSCL6T10-0.5
Spinal cord layer 3 T10ipsiSCL3T10-0.5
Spinal cord layer 4 T10ipsiSCL4T10-0.5
Spinal cord layer 1 T10ipsiSCL1T10-0.5
Spinal cord layer 2 T10ipsiSCL2T10-0.5
Spinal cord layer 7 T10ipsiSCL7T103
Spinal cord layer 8 T10ipsiSCL8T103
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 5 T11ipsiSCL5T11-0.5
Spinal cord layer 6 T11ipsiSCL6T11-0.5
Spinal cord layer 3 T11ipsiSCL3T11-0.5
Spinal cord layer 4 T11ipsiSCL4T11-0.5
Spinal cord layer 1 T11ipsiSCL1T11-0.5
Spinal cord layer 2 T11ipsiSCL2T11-0.5
Spinal cord layer 7 T11ipsiSCL7T113
Spinal cord layer 8 T11ipsiSCL8T113
Area X T12ipsiSCL10T12-0.5
Spinal cord layer 5 T12ipsiSCL5T12-0.5
Spinal cord layer 6 T12ipsiSCL6T12-0.5
Spinal cord layer 3 T12ipsiSCL3T12-0.5
Spinal cord layer 4 T12ipsiSCL4T12-0.5
Spinal cord layer 1 T12ipsiSCL1T12-0.5
Spinal cord layer 2 T12ipsiSCL2T12-0.5
Spinal cord layer 7 T12ipsiSCL7T123
Spinal cord layer 8 T12ipsiSCL8T123
Area X T13ipsiSCL10T13-0.5
Spinal cord layer 5 T13ipsiSCL5T13-0.5
Spinal cord layer 6 T13ipsiSCL6T13-0.5
Spinal cord layer 3 T13ipsiSCL3T13-0.5
Spinal cord layer 4 T13ipsiSCL4T13-0.5
Spinal cord layer 1 T13ipsiSCL1T13-0.5
Spinal cord layer 2 T13ipsiSCL2T13-0.5
Spinal cord layer 7 T13ipsiSCL7T133
Spinal cord layer 8 T13ipsiSCL8T133
Dorsal root ganglion L1ipsiDRGL10
Spinal cord layer 7 L1ipsiSCL7L13
Spinal cord layer 8 L1ipsiSCL8L13
Dorsal root ganglion L2ipsiDRGL20
Spinal cord layer 7 L2ipsiSCL7L23
Spinal cord layer 8 L2ipsiSCL8L23
Dorsal root ganglion L3ipsiDRGL30
Spinal cord layer 7 L3ipsiSCL7L33
Spinal cord layer 8 L3ipsiSCL8L33
Dorsal root ganglion L4ipsiDRGL40
Spinal cord layer 7 L4ipsiSCL7L43
Spinal cord layer 8 L4ipsiSCL8L43
Dorsal root ganglion L5ipsiDRGL50
Spinal cord layer 7 L5ipsiSCL7L53
Spinal cord layer 8 L5ipsiSCL8L53
Dorsal root ganglion L6ipsiDRGL60
Spinal cord layer 7 L6ipsiSCL7L63
Spinal cord layer 8 L6ipsiSCL8L63
Spinal cord layer 7 S1ipsiSCL7S13
Spinal cord layer 8 S1ipsiSCL8S13
Spinal cord layer 7 S2ipsiSCL7S23
Spinal cord layer 8 S2ipsiSCL8S23
Intermediate gray layer of the superior colliculuscontraInG-0.5
Locus coeruleuscontraLC1
Caudal part of ventral locus coeruleuscontraLCveca0.5
Medial reticular formationcontraRFm-0.5
Mesencephalic reticular formationcontraMRF-0.5
Deep mesencephalic nucleuscontraDpMe-0.5
Pontine reticular nucleus oral partcontraPnO0.5
Pontine reticular nucleus caudal partcontraPNC1
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus medial partcontraGiM-0.5
Spinal vestibular nucleuscontraSpVe-0.5
Medial vestibular nucleuscontraMVe-0.5
Spinal cord layer 7 T10contraSCL7T103
Spinal cord layer 8 T10contraSCL8T103
Spinal cord layer 7 T11contraSCL7T113
Spinal cord layer 8 T11contraSCL8T113
Spinal cord layer 7 T12contraSCL7T123
Spinal cord layer 8 T12contraSCL8T123
Spinal cord layer 7 T13contraSCL7T133
Spinal cord layer 8 T13contraSCL8T133
Spinal cord layer 7 L1contraSCL7L13
Spinal cord layer 8 L1contraSCL8L13
Spinal cord layer 7 L2contraSCL7L23
Spinal cord layer 8 L2contraSCL8L23
Spinal cord layer 7 L3contraSCL7L33
Spinal cord layer 8 L3contraSCL8L33
Spinal cord layer 7 L4contraSCL7L43
Spinal cord layer 8 L4contraSCL8L43
Spinal cord layer 7 L5contraSCL7L53
Spinal cord layer 8 L5contraSCL8L53
Spinal cord layer 7 L6contraSCL7L63
Spinal cord layer 8 L6contraSCL8L63
Spinal cord layer 7 S1contraSCL7S13
Spinal cord layer 8 S1contraSCL8S13
Spinal cord layer 7 S2contraSCL7S23
Spinal cord layer 8 S2contraSCL8S23

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications