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Rat connectome



Stomach left


Abbreviation
OrgsStomS
Color       
Superior regionsStomach

SynonymsAbbr.Language
StomachOrgsStomSEng
Gastric corpus  
Gaster  

SubregionsSide
Antrumleft
Cardia regionleft
Forestomachleft
Gastric fundusleft
Gastrooesophageal junctionleft
Greater curvature of the stomachleft
Lesser curvature of the stomachleft
Pylorusleft
Stomach corpusleft
Stomach myenteric ganglionleft
Stomach wallleft
Submucosal plexusleft
Gastric sling muscleleft
Gastrointestinal junctionleft
Circular sphincter muscleleft
Stomach myenteric plexusleft
Distal stomachleft
Mucosa of the stomachleft
Smoothe muscle layer of the stomachleft
Gastric corpus wall ventral partleft
Gastric corpus wall dorsal partleft
Mesenteries of the stomachleft
Peritoneal surfaces of the stomachleft
Stomach vagal intramuscular arrayleft

Output to

NameSideAbbr.WeightDetails
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract central partipsiSolCe0
Nucleus of the solitary tract commissural partipsiSolC1
Ventromedial aspect of the commissural nucleus of the solitary tractipsiSolCvm-0.5
Nucleus of the solitary tract dorsomedial partipsiSolDM-0.5
Nucleus of the solitary tract gelatinous partipsiSolG3
Nucleus of the solitary tract intermediate partipsiSolIM0
Nucleus of the solitary tract interstitial partipsiSoli0
Nucleus of the solitary tract medial partipsiSolM1
Dorsal root gangliaipsiDRG-0.5
Dorsal root ganglion T5ipsiDRGT5-0.5
Dorsal root ganglion T6ipsiDRGT6-0.5
Dorsal root ganglion T7ipsiDRGT7-0.5
Dorsal root ganglion T8ipsiDRGT8-0.5
Dorsal root ganglion T9ipsiDRGT9-0.5
Dorsal root ganglion T10ipsiDRGT10-0.5
Dorsal root ganglion T11ipsiDRGT113
Dorsal root ganglion T12ipsiDRGT12-0.5
Dorsal root ganglion T13ipsiDRGT13-0.5
Dorsal root ganglion L1ipsiDRGL1-0.5
Dorsal root ganglion L2ipsiDRGL2-0.5
Dorsal root ganglion L6ipsiDRGL6-0.5
Dorsal root ganglion S1ipsiDRGS1-0.5
Nucleus of the solitary tract commissural partcontraSolC1
Nucleus of the solitary tract gelatinous partcontraSolG3
Nucleus of the solitary tract medial partcontraSolM1
Dorsal root ganglion T5contraDRGT5-0.5
Dorsal root ganglion T6contraDRGT6-0.5
Dorsal root ganglion T7contraDRGT7-0.5
Dorsal root ganglion T8contraDRGT8-0.5
Dorsal root ganglion T9contraDRGT9-0.5
Dorsal root ganglion T10contraDRGT10-0.5
Dorsal root ganglion T11contraDRGT113
Dorsal root ganglion T12contraDRGT12-0.5
Dorsal root ganglion T13contraDRGT13-0.5
Dorsal root ganglion L1contraDRGL1-0.5
Dorsal root ganglion L2contraDRGL2-0.5
Celiac ganglionipsiAutoCel-2
Jugular ganglionipsiAutoJG1
Nodose ganglionipsiAutoNoG3
Hepatic branch of vagus nerveipsiAutoHeB-2
Nodose ganglioncontraAutoNoG-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
A5 noradrenaline cellsipsiA5-0.5
Locus coeruleusipsiLC-0.5
Caudoventrolateral reticular nucleusipsiCVLR-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Gigantocellular reticular nucleusipsiGi-0.5
Medullary reticular nucleusipsiMdD-10
Medulla oblongataipsiMeOb2
C1 adrenaline cellsipsiC1-0.5
Ambiguus nucleusipsiAmb1
Ambiguus nucleus compact partipsiAmbC-0.5
Periambigual areaipsiPeriAmb2
Area postremaipsiAP-0.5
Vestibular nucleiipsiVnc-0.5
Nucleus of the solitary tractipsiSol1.5
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract gelatinous partipsiSolG-0.5
Nucleus of the solitary tract medial partipsiSolM-0.5
Nucleus of the solitary tract ventral partipsiSolV0.5
Dorsal motor nucleus of vagusipsi103
Dorsal motor nucleus of vagus caudal partipsi10C3
Dorsal motor nucleus of vagus medial partipsi10M3
Dorsal motor nucleus of vagus rostral partipsi10R3
Dorsal motor nucleus of vagus mediolateral partipsi10MeLa-0.5
Dorsal motor nucleus of vagus rostrocaudal partipsi10RoCa-0.5
Gastric motoneurons of the dorsal motor nucleus of vagusipsi10GaMo-0.5
Intermediate dorsal motor nucleus of vagusipsiim10-0.5
Subpostremal dorsal vagal complexipsi10sp4
Intermediate dorsal vagal complexipsi10id3
Dorsal motor nucleus of vagus boundariesipsi10b3
Raphe magnus nucleusipsiRMg-0.5
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa-0.5
Ventral lateral medulla oblongataipsiMVL1
A1 noradrenergic cellsipsiA1-0.5
Caudoventral reticular nucleusipsiCVL-0.5
Ventromedial medulla oblongataipsiMeObvm-10
Lateral hypothalamic areaipsiLH-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Retrochiasmatic areaipsiRCh-0.5
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Spinal cord lamina 10ipsiMESL10-0.5
Spinal cord lamina 4ipsiMESL4-0.5
Spinal cord lamina 5ipsiMESL5-0.5
Spinal cord lamina 7ipsiMESL7-0.5
Ventral horn C8ipsiVHC8-0.5
Area X T1ipsiSCL10T1-1
Spinal cord layer 5 T1ipsiSCL5T1-1
Spinal cord layer 6 T1ipsiSCL6T1-1
Spinal cord layer 3 T1ipsiSCL3T1-1
Spinal cord layer 4 T1ipsiSCL4T1-1
Spinal cord layer 1 T1ipsiSCL1T1-1
Spinal cord layer 2 T1ipsiSCL2T1-1
Ventral horn T1ipsiVHT1-0.5
Spinal cord layer 7 T1ipsiSCL7T1-1
Spinal cord layer 8 T1ipsiSCL8T1-1
Spinal cord layer 9 T1ipsiSCL9T1-1
Area X T2ipsiSCL10T2-1
Spinal cord layer 5 T2ipsiSCL5T2-1
Spinal cord layer 6 T2ipsiSCL6T2-1
Spinal cord layer 3 T2ipsiSCL3T2-1
Spinal cord layer 4 T2ipsiSCL4T2-1
Spinal cord layer 1 T2ipsiSCL1T2-1
Spinal cord layer 2 T2ipsiSCL2T2-1
Ventral horn T2ipsiVHT2-0.5
Spinal cord layer 7 T2ipsiSCL7T2-1
Spinal cord layer 8 T2ipsiSCL8T2-1
Spinal cord layer 9 T2ipsiSCL9T2-1
Area X T3ipsiSCL10T3-1
Spinal cord layer 5 T3ipsiSCL5T3-1
Spinal cord layer 6 T3ipsiSCL6T3-1
Spinal cord layer 3 T3ipsiSCL3T3-1
Spinal cord layer 4 T3ipsiSCL4T3-1
Spinal cord layer 1 T3ipsiSCL1T3-1
Spinal cord layer 2 T3ipsiSCL2T3-1
Ventral horn T3ipsiVHT3-0.5
Spinal cord layer 7 T3ipsiSCL7T3-1
Spinal cord layer 8 T3ipsiSCL8T3-1
Spinal cord layer 9 T3ipsiSCL9T3-1
Area X T4ipsiSCL10T4-1
Spinal cord layer 5 T4ipsiSCL5T4-1
Spinal cord layer 6 T4ipsiSCL6T4-1
Spinal cord layer 3 T4ipsiSCL3T4-1
Spinal cord layer 4 T4ipsiSCL4T4-1
Spinal cord layer 1 T4ipsiSCL1T4-1
Spinal cord layer 2 T4ipsiSCL2T4-1
Ventral horn T4ipsiVHT4-0.5
Spinal cord layer 7 T4ipsiSCL7T4-1
Spinal cord layer 8 T4ipsiSCL8T4-1
Spinal cord layer 9 T4ipsiSCL9T4-1
Area X T5ipsiSCL10T5-1
Spinal cord layer 5 T5ipsiSCL5T5-1
Spinal cord layer 6 T5ipsiSCL6T5-1
Spinal cord layer 3 T5ipsiSCL3T5-1
Spinal cord layer 4 T5ipsiSCL4T5-1
Spinal cord layer 1 T5ipsiSCL1T5-1
Spinal cord layer 2 T5ipsiSCL2T5-1
Ventral horn T5ipsiVHT5-0.5
Spinal cord layer 7 T5ipsiSCL7T5-1
Spinal cord layer 8 T5ipsiSCL8T5-1
Spinal cord layer 9 T5ipsiSCL9T5-1
Area X T6ipsiSCL10T6-1
Spinal cord layer 5 T6ipsiSCL5T6-1
Spinal cord layer 6 T6ipsiSCL6T6-1
Spinal cord layer 3 T6ipsiSCL3T6-1
Spinal cord layer 4 T6ipsiSCL4T6-1
Spinal cord layer 1 T6ipsiSCL1T6-1
Spinal cord layer 2 T6ipsiSCL2T6-1
Ventral horn T6ipsiVHT6-0.5
Spinal cord layer 7 T6ipsiSCL7T6-1
Spinal cord layer 8 T6ipsiSCL8T6-1
Spinal cord layer 9 T6ipsiSCL9T6-1
Area X T7ipsiSCL10T7-1
Spinal cord layer 5 T7ipsiSCL5T7-1
Spinal cord layer 6 T7ipsiSCL6T7-1
Spinal cord layer 3 T7ipsiSCL3T7-1
Spinal cord layer 4 T7ipsiSCL4T7-1
Spinal cord layer 1 T7ipsiSCL1T7-1
Spinal cord layer 2 T7ipsiSCL2T7-1
Ventral horn T7ipsiVHT7-0.5
Spinal cord layer 7 T7ipsiSCL7T7-1
Spinal cord layer 8 T7ipsiSCL8T7-1
Spinal cord layer 9 T7ipsiSCL9T7-1
Area X T8ipsiSCL10T8-1
Spinal cord layer 5 T8ipsiSCL5T8-1
Spinal cord layer 6 T8ipsiSCL6T8-1
Spinal cord layer 3 T8ipsiSCL3T8-1
Spinal cord layer 4 T8ipsiSCL4T8-1
Spinal cord layer 1 T8ipsiSCL1T8-1
Spinal cord layer 2 T8ipsiSCL2T8-1
Ventral horn T8ipsiVHT8-0.5
Spinal cord layer 7 T8ipsiSCL7T8-1
Spinal cord layer 8 T8ipsiSCL8T8-1
Spinal cord layer 9 T8ipsiSCL9T8-1
Area X T9ipsiSCL10T9-1
Spinal cord layer 5 T9ipsiSCL5T9-1
Spinal cord layer 6 T9ipsiSCL6T9-1
Spinal cord layer 3 T9ipsiSCL3T9-1
Spinal cord layer 4 T9ipsiSCL4T9-1
Spinal cord layer 1 T9ipsiSCL1T9-1
Spinal cord layer 2 T9ipsiSCL2T9-1
Ventral horn T9ipsiVHT9-0.5
Spinal cord layer 7 T9ipsiSCL7T9-1
Spinal cord layer 8 T9ipsiSCL8T9-1
Spinal cord layer 9 T9ipsiSCL9T9-1
Dorsal root ganglion T10ipsiDRGT10-0.5
Area X T10ipsiSCL10T10-1
Spinal cord layer 5 T10ipsiSCL5T10-1
Spinal cord layer 6 T10ipsiSCL6T10-1
Spinal cord layer 3 T10ipsiSCL3T10-1
Spinal cord layer 4 T10ipsiSCL4T10-1
Spinal cord layer 1 T10ipsiSCL1T10-1
Spinal cord layer 2 T10ipsiSCL2T10-1
Ventral horn T10ipsiVHT10-0.5
Spinal cord layer 7 T10ipsiSCL7T10-1
Spinal cord layer 8 T10ipsiSCL8T10-1
Spinal cord layer 9 T10ipsiSCL9T10-1
Dorsal root ganglion T11ipsiDRGT11-0.5
Area X T11ipsiSCL10T11-1
Spinal cord layer 5 T11ipsiSCL5T11-1
Spinal cord layer 6 T11ipsiSCL6T11-1
Spinal cord layer 3 T11ipsiSCL3T11-1
Spinal cord layer 4 T11ipsiSCL4T11-1
Spinal cord layer 1 T11ipsiSCL1T11-1
Spinal cord layer 2 T11ipsiSCL2T11-1
Ventral horn T11ipsiVHT11-0.5
Spinal cord layer 7 T11ipsiSCL7T11-1
Spinal cord layer 8 T11ipsiSCL8T11-1
Spinal cord layer 9 T11ipsiSCL9T11-1
Dorsal root ganglion T12ipsiDRGT12-0.5
Area X T12ipsiSCL10T12-1
Spinal cord layer 5 T12ipsiSCL5T12-1
Spinal cord layer 6 T12ipsiSCL6T12-1
Spinal cord layer 3 T12ipsiSCL3T12-1
Spinal cord layer 4 T12ipsiSCL4T12-1
Spinal cord layer 1 T12ipsiSCL1T12-1
Spinal cord layer 2 T12ipsiSCL2T12-1
Ventral horn T12ipsiVHT12-0.5
Spinal cord layer 7 T12ipsiSCL7T12-1
Spinal cord layer 8 T12ipsiSCL8T12-1
Spinal cord layer 9 T12ipsiSCL9T12-1
Area X T13ipsiSCL10T13-1
Spinal cord layer 5 T13ipsiSCL5T13-1
Spinal cord layer 6 T13ipsiSCL6T13-1
Spinal cord layer 3 T13ipsiSCL3T13-1
Spinal cord layer 4 T13ipsiSCL4T13-1
Spinal cord layer 1 T13ipsiSCL1T13-1
Spinal cord layer 2 T13ipsiSCL2T13-1
Ventral horn T13ipsiVHT13-0.5
Spinal cord layer 7 T13ipsiSCL7T13-1
Spinal cord layer 8 T13ipsiSCL8T13-1
Spinal cord layer 9 T13ipsiSCL9T13-1
Area X L1ipsiSCL10L1-1
Spinal cord layer 5 L1ipsiSCL5L1-1
Spinal cord layer 6 L1ipsiSCL6L1-1
Spinal cord layer 3 L1ipsiSCL3L1-1
Spinal cord layer 4 L1ipsiSCL4L1-1
Spinal cord layer 1 L1ipsiSCL1L1-1
Spinal cord layer 2 L1ipsiSCL2L1-1
Ventral horn L1ipsiVHL1-0.5
Spinal cord layer 7 L1ipsiSCL7L1-1
Spinal cord layer 8 L1ipsiSCL8L1-1
Spinal cord layer 9 L1ipsiSCL9L1-1
Area X L2ipsiSCL10L2-1
Spinal cord layer 5 L2ipsiSCL5L2-1
Spinal cord layer 6 L2ipsiSCL6L2-1
Spinal cord layer 3 L2ipsiSCL3L2-1
Spinal cord layer 4 L2ipsiSCL4L2-1
Spinal cord layer 1 L2ipsiSCL1L2-1
Spinal cord layer 2 L2ipsiSCL2L2-1
Ventral horn L2ipsiVHL2-0.5
Spinal cord layer 7 L2ipsiSCL7L2-1
Spinal cord layer 8 L2ipsiSCL8L2-1
Spinal cord layer 9 L2ipsiSCL9L2-1
Area X L3ipsiSCL10L3-1
Spinal cord layer 5 L3ipsiSCL5L3-1
Spinal cord layer 6 L3ipsiSCL6L3-1
Spinal cord layer 3 L3ipsiSCL3L3-1
Spinal cord layer 4 L3ipsiSCL4L3-1
Spinal cord layer 1 L3ipsiSCL1L3-1
Spinal cord layer 2 L3ipsiSCL2L3-1
Ventral horn L3ipsiVHL3-0.5
Spinal cord layer 7 L3ipsiSCL7L3-1
Spinal cord layer 8 L3ipsiSCL8L3-1
Spinal cord layer 9 L3ipsiSCL9L3-1
Area X L4ipsiSCL10L4-1
Spinal cord layer 5 L4ipsiSCL5L4-1
Spinal cord layer 6 L4ipsiSCL6L4-1
Spinal cord layer 3 L4ipsiSCL3L4-1
Spinal cord layer 4 L4ipsiSCL4L4-1
Spinal cord layer 1 L4ipsiSCL1L4-1
Spinal cord layer 2 L4ipsiSCL2L4-1
Spinal cord layer 7 L4ipsiSCL7L4-1
Spinal cord layer 8 L4ipsiSCL8L4-1
Spinal cord layer 9 L4ipsiSCL9L4-1
Area X L5ipsiSCL10L5-1
Spinal cord layer 5 L5ipsiSCL5L5-1
Spinal cord layer 6 L5ipsiSCL6L5-1
Spinal cord layer 3 L5ipsiSCL3L5-1
Spinal cord layer 4 L5ipsiSCL4L5-1
Spinal cord layer 1 L5ipsiSCL1L5-1
Spinal cord layer 2 L5ipsiSCL2L5-1
Spinal cord layer 7 L5ipsiSCL7L5-1
Spinal cord layer 8 L5ipsiSCL8L5-1
Spinal cord layer 9 L5ipsiSCL9L5-1
Area X L6ipsiSCL10L6-1
Spinal cord layer 5 L6ipsiSCL5L6-1
Spinal cord layer 6 L6ipsiSCL6L6-1
Spinal cord layer 3 L6ipsiSCL3L6-1
Spinal cord layer 4 L6ipsiSCL4L6-1
Spinal cord layer 1 L6ipsiSCL1L6-1
Spinal cord layer 2 L6ipsiSCL2L6-1
Spinal cord layer 7 L6ipsiSCL7L6-1
Spinal cord layer 8 L6ipsiSCL8L6-1
Spinal cord layer 9 L6ipsiSCL9L6-1
Area X S1ipsiSCL10S1-1
Spinal cord layer 5 S1ipsiSCL5S1-1
Spinal cord layer 6 S1ipsiSCL6S1-1
Spinal cord layer 3 S1ipsiSCL3S1-1
Spinal cord layer 4 S1ipsiSCL4S1-1
Spinal cord layer 1 S1ipsiSCL1S1-1
Spinal cord layer 2 S1ipsiSCL2S1-1
Spinal cord layer 7 S1ipsiSCL7S1-1
Spinal cord layer 8 S1ipsiSCL8S1-1
Spinal cord layer 9 S1ipsiSCL9S1-1
Area X S2ipsiSCL10S2-1
Spinal cord layer 5 S2ipsiSCL5S2-1
Spinal cord layer 6 S2ipsiSCL6S2-1
Spinal cord layer 3 S2ipsiSCL3S2-1
Spinal cord layer 4 S2ipsiSCL4S2-1
Spinal cord layer 1 S2ipsiSCL1S2-1
Spinal cord layer 2 S2ipsiSCL2S2-1
Spinal cord layer 7 S2ipsiSCL7S2-1
Spinal cord layer 8 S2ipsiSCL8S2-1
Spinal cord layer 9 S2ipsiSCL9S2-1
Area X S3ipsiSCL10S3-1
Spinal cord layer 5 S3ipsiSCL5S3-1
Spinal cord layer 6 S3ipsiSCL6S3-1
Spinal cord layer 3 S3ipsiSCL3S3-1
Spinal cord layer 4 S3ipsiSCL4S3-1
Spinal cord layer 1 S3ipsiSCL1S3-1
Spinal cord layer 2 S3ipsiSCL2S3-1
Spinal cord layer 7 S3ipsiSCL7S3-1
Spinal cord layer 8 S3ipsiSCL8S3-1
Spinal cord layer 9 S3ipsiSCL9S3-1
Area X S4ipsiSCL10S4-1
Spinal cord layer 5 S4ipsiSCL5S4-1
Spinal cord layer 6 S4ipsiSCL6S4-1
Spinal cord layer 3 S4ipsiSCL3S4-1
Spinal cord layer 4 S4ipsiSCL4S4-1
Spinal cord layer 1 S4ipsiSCL1S4-1
Spinal cord layer 2 S4ipsiSCL2S4-1
Spinal cord layer 7 S4ipsiSCL7S4-1
Spinal cord layer 8 S4ipsiSCL8S4-1
Spinal cord layer 9 S4ipsiSCL9S4-1
Medulla oblongatacontraMeOb2
Ambiguus nucleus compact partcontraAmbC-0.5
Periambigual areacontraPeriAmb0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract commissural partcontraSolC-0.5
Nucleus of the solitary tract gelatinous partcontraSolG-0.5
Nucleus of the solitary tract medial partcontraSolM-0.5
Dorsal motor nucleus of vaguscontra103
Dorsal motor nucleus of vagus caudal partcontra10C3
Dorsal motor nucleus of vagus medial partcontra10M3
Dorsal motor nucleus of vagus rostral partcontra10R1
Dorsal motor nucleus of vagus mediolateral partcontra10MeLa-0.5
Dorsal motor nucleus of vagus rostrocaudal partcontra10RoCa-0.5
Gastric motoneurons of the dorsal motor nucleus of vaguscontra10GaMo-0.5
Dorsal motor nucleus of vagus boundariescontra10b3
Ventral lateral medulla oblongatacontraMVL1
Paravertebral sympathetic gangliaipsiAutoPaGTSym1
Celiac ganglionipsiAutoCel3
Superior mesenteric ganglionipsiAutoSmes0.5
Inter-renal ganglionipsiAutoParGIR0
Splanchnic gangliaipsiAutoSPLAG1
Nodose ganglionipsiAutoNoG3
Gastric branch of the vagus nerveipsiAutoVgb3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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