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Rat connectome

Anterodorsal thalamic nucleus right

Abbreviation	AD
Color
Superior regions	Anterior group of the dorsal thalamus

Synonyms	Abbr.	Language
	ATN
Anterodorsal nucleus thalamus	AD	Eng
Anterodorsal thalamic nucleus	AD	Eng

Subregions	Side
Anterodorsal thalamic nucleus caudal part	right
Anterodorsal thalamic nucleus dorsal part	right
Anterodorsal thalamic nucleus dorsolateral part	right
Anterodorsal thalamic nucleus dorsomedial part	right
Anterodorsal thalamic nucleus medial part	right
Anterodorsal thalamic nucleus middle part	right
Anterodorsal thalamic nucleus rostral part	right
Anterodorsal thalamic nucleus rostrodorsal tip	right
Anterodorsal thalamic nucleus rostroventral tip	right
Anterodorsal thalamic nucleus ventral part	right
Anterodorsal thalamic nucleus posterior part	right

Output to

Name	Side	Abbr.	Weight
Anterior group of the dorsal thalamus	contra	ATN	3
Dorsal hippocampus	contra	HIPPd	2
Field CA1 of hippocampus	contra	CA1	1
Subiculum ventral part	contra	Sv	-0.5
Retrosplenial regions	contra	RS	-0.5
Retrosplenial cortex anterior part layer 1 superficial part	contra	RSanL1s	1
Retrosplenial cortex anterior part layer 2 superficial part	contra	RSanL2s	1
Retrosplenial cortex anterior part layer 3 superficial part	contra	RSanL3s	2
Retrosplenial cortex posterior part layer 1 superficial part	contra	RSpoL1s	1
Retrosplenial cortex posterior part layer 2 superficial part	contra	RSpoL2s	1
Retrosplenial cortex posterior part layer 3 superficial part	contra	RSpoL3s	2
Paralemniscal nucleus	ipsi	PL	0
Ventral tegmental area A10	ipsi	VTA	-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVC	0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVR	0
Lateral zone	ipsi	LHA	-3
Lateral hypothalamic area	ipsi	LH	0
Lateral hypothalamic area juxtadorsomedial region	ipsi	JDM	0
Posterior hypothalamic nucleus	ipsi	PH	0
Supramammillar nucleus	ipsi	SuM	-0.5
Dorsal thalamus	ipsi	DOR	-0.5
Anterior group of the dorsal thalamus	ipsi	ATN	-0.5
Anteroventral thalamic nucleus	ipsi	AV	-0.5
Dorsal part of posterior subdivision of anteroventral thalamic nucleus	ipsi	AVPD	2
Laterodorsal thalamic nucleus	ipsi	LD	-0.5
Reticular thalamic nucleus	ipsi	Rt	2
Reticular thalamic nucleus caudal part	ipsi	Rtc	-10
Reticular thalamic nucleus rostral part	ipsi	Rtr	3
Dorsal part of reticular thalamic nucleus rostral part	ipsi	RtrD	2
Medial forebrain bundle at the level of the anterior commissure	ipsi	mfbac	-2
Medial forebrain bundle at the level of the lateral preoptic arera	ipsi	mfbLpa	0
Medial forebrain bundle at the level of the anterior hypothalamic nucleus	ipsi	mfbahn	0
Medial forebrain bundle at the level of the lateral hypothalamus	ipsi	mfbLH	-2
Medial forebrain bundle at the level of the posterior hypothalamic nucleus	ipsi	mfbPH	0
Dorsal bank of the anterior portion of the rhinal fissure	ipsi	darf	0
Bed nucleus of the stria terminalis	ipsi	BST	-0.5
Accumbens nucleus anteromedial part	ipsi	AcAM	1
Caudate putamen	ipsi	CPu	-0.5
Cerebral cortex	ipsi	CEC	-0.5
Hippocampus	ipsi	HIPP	-0.5
Dorsal hippocampus	ipsi	HIPPd	3
Field CA1 of hippocampus	ipsi	CA1	3
Field CA3 of hippocampus	ipsi	CA3	-0.5
Subiculum	ipsi	S	3
Subiculum distal part	ipsi	Sdi	-0.5
Subiculum dorsal distal part	ipsi	Sdd	3
Caudal part of the dorsal distal subiculum	ipsi	SddC	-0.5
Subiculum septal part	ipsi	Sse	0.5
Subiculum ventral part	ipsi	Sv	-0.5
Presubiculum	ipsi	PrS	3
Presubiculum layer 1	ipsi	PrSL1	-1
Presubiculum layer 3	ipsi	PrSL3	-1
Parasubiculum	ipsi	PaS	2
Parasubiculum layer 4	ipsi	PaSL4	-0.5
Parasubiculum layer 5	ipsi	PaSL5	-0.5
Parasubiculum layer 6	ipsi	PaSL6	-0.5
Postsubiculum	ipsi	Post	3
Postsubiculum layers	ipsi	PostL	-0.5
Entorhinal cortex	ipsi	Ent	2
Lateral entorhinal cortex	ipsi	LEnt	2
Medial entorhinal cortex dorsal part	ipsi	MEntD	2
Medial entorhinal cortex layer 3	ipsi	MEntLyL3	1
Medial entorhinal cortex caudal part	ipsi	MEntCa	-0.5
Retrosplenial regions	ipsi	RS	3
Retrosplenial dorsal	ipsi	RSd	2
Retrosplenial ventral part	ipsi	RSPv	3
Retrosplenial ventral a	ipsi	RSv-a	3
Retrosplenial area ventral part zone b/c	ipsi	RSPv-bc	3
Retrosplenial cortex middle part layer 1	ipsi	RSmiL1	-0.5
Retrosplenial cortex middle part layer 2	ipsi	RSmiL2	-0.5
Retrosplenial cortex middle part layer 3	ipsi	RSmiL3	-0.5
Retrosplenial cortex middle part layer 4	ipsi	RSmiL4	-0.5
Retrosplenial cortex middle part layer 5	ipsi	RSmiL5	-0.5
Retrosplenial cortex middle part layer 6	ipsi	RSmiL6	-0.5
Retrosplenial dysgranular cortex layer 1	ipsi	RSdysL1	0.5
Retrosplenial dysgranular cortex layer 3	ipsi	RSdysL3	0.5
Retrosplenial dysgranular cortex layer 4	ipsi	RSdysL4	0.5
Midrostrocaudal part of the retrosplenial dysgranular cortex	ipsi	RSdysmrc	1
Lateral part of the retrosplenial dysgranular cortex	ipsi	RSdysLa	3
Retrosplenial granular cortex	ipsi	RSGra	-0.5
Retrosplenial granular cortex subdivisions	ipsi	RSGsu	3
Retrosplenial granular cortex a region	ipsi	RSGa	3
Retrosplenial granular a cortex layer 1	ipsi	RSGa1	-0.5
Retrosplenial granular a cortex layer 3	ipsi	RSGa3	-0.5
Retrosplenial granular a cortex layer 4	ipsi	RSGa4	-0.5
Retrosplenial granular a cortex ventral part	ipsi	RSGaV	-0.5
Retrosplenial granular cortex b region	ipsi	RSGb	3
Retrosplenial granular b cortex layer 4	ipsi	RSGb4	1
Retrosplenial granular b cortex layer 1	ipsi	RSGb1	1
Retrosplenial granular b cortex layer 2	ipsi	RSGb2	1
Area 29	ipsi	A29	-0.5
Retrosplenial granular cortex c region	ipsi	RSGc	2
Deep layers of retrosplenial granular cortex	ipsi	DRSG	2
Retrosplenial granular cortex layer 1	ipsi	RSGL1	2
Retrosplenial granular cortex layer 1a	ipsi	RSGL1a	-1
Retrosplenial granular cortex layer 2	ipsi	RSGL2	2
Retrosplenial granular cortex layer 3	ipsi	RSGL3	2
Cingulate cortex	ipsi	Cg	3
Anterior cingulate cortex	ipsi	ACC	3
Anterior cingulate cortex anterior part	ipsi	ACCa	0.5
Anterior cingulate cortex caudal part layer 1	ipsi	ACCcL1	-0.5
Anterior cingulate cortex layer 5	ipsi	ACCL5	0
Anterior cingulate cortex posterior part	ipsi	ACCp	2
Dorsal anterior cingulate cortex	ipsi	DACC	1
Ventral anterior cingulate cortex	ipsi	VACC	0
Ventral anterior cingulate cortex layer 3	ipsi	VACCL3	3
Middle cingulate cortex	ipsi	MCC	-0.5
Posterior cingulate cortex	ipsi	PCC	-0.5
Posterior cingulate cortex anterior part	ipsi	PCCa	2.5
Posterior cingulate cortex posterior part	ipsi	PCCp	1.5
Prelimbic cortex	ipsi	PrL	3
Prelimbic cortex ventral part layer 3	ipsi	PrLvL3	3
Infralimbic area	ipsi	iLA	0
Infralimbic cortex	ipsi	IL	-3
Frontal association cortex	ipsi	FrA	-0.5
Most ventral part of the pregenual part of the anteromedial cortex	ipsi	Fr2mvpg	0
Frontal cortex area 2 ventral part layer 3	ipsi	Fr2vL3	2
Parietal association cortex	ipsi	PtA	0
Ventral temporal association cortex	ipsi	Tev	-1
Frontal polar cortex	ipsi	FP	2
Agranular insular cortex dorsal part layer 3	ipsi	AIDL3	-0.5
Perirhinal cortex	ipsi	A35	2
Ectorhinal cortex	ipsi	A36	2
Prefrontal cortex supragenual part	ipsi	sgPFC	0
Dorsal part of the pregenual sector of the prefrontal cortex	ipsi	dpgPFC	0
Somatomotoric regions	ipsi	SMR	1
Lateral agranular prefrontal cortex	ipsi	AGl	2
Elbow flexion motor cortex	ipsi	EFMCx	0
Ankle dorsiflexion motor cortex	ipsi	ADFMCx	1
Ankle plantar flexion motor cortex	ipsi	APFMCx	1
Hip flexion motor cortex	ipsi	HFMCx	1
Medial prefrontal cortex	ipsi	mPFC	0
Medial prefrontal cortex layer 5	ipsi	mPFCL5	0
Medial prefrontal cortex layer 3	ipsi	mPFCL3	0
Medial prefrontal cortex layer 4	ipsi	mPFCL4	0
Medial prefrontal cortex posterior part	ipsi	mPFCp	0
Primary somatosensory cortex	ipsi	S1	0
Visual regions	ipsi	VR	-0.5
Secondary visual cortex	ipsi	V2	3
Secondary visual cortex medial area	ipsi	V2M	-1
Medial extrastriate cortex	ipsi	VISM	0
Lateral orbital cortex	ipsi	LO	3
Medial orbital cortex layer 3	ipsi	MOcxL3	2
Ventral orbital cortex	ipsi	VO	3
Ventrolateral orbital area layer 3	ipsi	VLOL3	-0.5
Lateral septal nucleus	ipsi	LS	-0.5
Lateral septal nucleus rostral part	ipsi	LSr	2

Input from

Name	Side	Abbr.	Weight
Central gray pons part	contra	CGP	-0.5
Ventral periaqueductal gray	contra	VPAG	-0.5
Ventral tegmental area A10 lateral nuclei	contra	VTALN	1
Ventral tegmental area posterior part	contra	VTAP	1
Laterodorsal tegmental nucleus	contra	LDTg	0.5
Dorsal tegmental nucleus	contra	DTg	1
Dorsal tegmental nucleus lateral part	contra	DLTN	2
Pedunculopontine tegmental nucleus	contra	PPTg	2
Pedunculopontine tegmental nucleus pars compacta	contra	PPNC	0.5
Reticulotegmental nucleus of the pons	contra	RtTg	0.5
Dorsal raphe nucleus	contra	DR	2
Mammillary body	contra	CMAM	3
Lateral mammillary nucleus	contra	LM	3
Medial mammillary nucleus	contra	MMn	3
Medial mammillary nucleus lateral part	contra	ML	2
Ventral part of reticular thalamic nucleus rostral part	contra	RtrVe	1
Retina	contra	RET	1
Subiculum dorsal part	contra	Sd	3
Subiculum ventral part	contra	Sv	2
Presubiculum	contra	PrS	1
Parasubiculum layer 6	contra	PaSL6	-0.5
Postsubiculum	contra	Post	-0.5
Retrosplenial regions	contra	RS	-0.5
Retrosplenial granular a cortex middle part layer 2	contra	RSGaMiL2	1
Retrosplenial granular a cortex middle part layer 3	contra	RSGaMiL3	1
Retrosplenial granular a cortex middle part layer 4	contra	RSGaMiL4	1
Retrosplenial granular a cortex middle part layer 5	contra	RSGaMiL5	1
Retrosplenial granular a cortex middle part layer 6	contra	RSGaMiL6	1
Area 29a layer 6 deep part	contra	A29aL6d	0.5
Area 29b layer 6 deep part	contra	A29bL6d	0.5
Area 29d caudal part layer 6 deep part	contra	A29dCL6d	0.5
Retrosplenial granular cortex caudal part layer 6 deep part	contra	RSGc6d	0.5
Retrosplenial granular cortex caudal part caudal part	contra	RSGcc	1
Retrosplenial granular cortex layer 5	contra	RSGL5	1
Retrosplenial granular cortex layer 6	contra	RSGL6	1
Anterior cingulate cortex layer 6	contra	ACCL6	0.5
Dorsal anterior cingulate cortex	contra	DACC	1
Medial agranular prefrontal cortex layer 6	contra	AGmL6	0.5
Central gray pons part	ipsi	CGP	-0.5
Ventral periaqueductal gray	ipsi	VPAG	-0.5
Periventricular gray matter	ipsi	PVG	1
Ventral tegmental area A10	ipsi	VTA	-0.5
Ventral tegmental area A10 lateral nuclei	ipsi	VTALN	1
Ventral tegmental area A10 medial nuclei	ipsi	VTAmn	0
Ventral tegmental area posterior part	ipsi	VTAP	1
Laterodorsal tegmental nucleus	ipsi	LDTg	3
Ventral tegmental nucleus	ipsi	VTg	-0.5
Dorsal tegmental nucleus	ipsi	DTg	3
Dorsal tegmental nucleus dorsal part	ipsi	DTgD	0
Dorsal tegmental nucleus lateral part	ipsi	DLTN	2
Ventromedial part of the ventral aprt of the dorsal tegmental nucleus	ipsi	DTgVVM	0
Pedunculopontine tegmental nucleus	ipsi	PPTg	2
Pedunculopontine tegmental nucleus pars compacta	ipsi	PPNC	3
Locus coeruleus	ipsi	LC	1
Reticulotegmental nucleus of the pons	ipsi	RtTg	1
Gigantocellular reticular nucleus	ipsi	Gi	0
Anterior part of spinal trigeminal nucleus oral part	ipsi	Sp5OA	2
Raphe nuclei	ipsi	RAN	-0.5
Dorsal raphe nucleus	ipsi	DR	2
Median raphe nucleus	ipsi	MnR	1
Pontine raphe nucleus	ipsi	PnR	0
Raphe magnus nucleus	ipsi	RMg	0
Hypothalamus	ipsi	HYPO	-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVC	0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVR	0
Lateral hypothalamic area	ipsi	LH	1
Lateral hypothalamic area juxtadorsomedial region	ipsi	JDM	0
Lateral hypothalamic area perifornical part	ipsi	PFx	1
Dorsomedial hypothalamic nucleus [Medial zone]	ipsi	DM	1
Dorsomedial hypothalamic nucleus dorsomedial part	ipsi	DMDM	1
Posterior hypothalamic area	ipsi	PHA	1
Midlateral posterior hypothalamic area	ipsi	PHAmL	-0.5
Posterior hypothalamic nucleus caudal part	ipsi	PHCa	0
Posterior hypothalamic nucleus rostral part	ipsi	PHRo	0
Mammillary body	ipsi	CMAM	3
Lateral mammillary nucleus	ipsi	LM	3
Medial mammillary nucleus	ipsi	MMn	0
Medial mammillary nucleus lateral part	ipsi	ML	2
Medial mammillary nucleus medial part	ipsi	MM	3
Medial mammillary nucleus median part	ipsi	MMnm	3
Medial mammillary nucleus posterior part	ipsi	MMNp	3
Posterior mammillay nucleus	ipsi	PMAM	2
Premammillary nucleus dorsal part	ipsi	PMD	1
Supramammillar nucleus	ipsi	SuM	1
Supramammillar nucleus lateral part lateral subpart	ipsi	SuMLL	0
Supramammillar nucleus lateral part medial subpart	ipsi	SuMLM	1
Supramammillar nucleus medial part	ipsi	SuMM	1
Thalamus	ipsi	T	-0.5
Anteroventral thalamic nucleus	ipsi	AV	-0.5
Reticular thalamic nucleus	ipsi	Rt	2
Reticular thalamic nucleus anterodorsal part	ipsi	RtAD	2
Reticular thalamic nucleus dorsal part	ipsi	RtD	2
Reticular thalamic nucleus medial part	ipsi	Rtm	1
Reticular thalamic nucleus rostral medial part	ipsi	Rtrm	2
Reticular thalamic nucleus rostral part	ipsi	Rtr	2
Dorsal part of reticular thalamic nucleus rostral part	ipsi	RtrD	3
Dorsolateral part of reticular thalamic nucleus rostral part	ipsi	RtrDL	1
Dorsomedial part of reticular thalamic nucleus rostral part	ipsi	RtrDM	1.5
Reticular thalamic nucleus rostrocaudal part	ipsi	Rtrc	3
Reticular thalamic nucleus rostroventral part	ipsi	Rtrv	2
Subparafascicular thalamic nucleus	ipsi	SPF	2
Subparafascicular thalamic nucleus rostral part	ipsi	SPFr	0
Medial pretectal nucleus	ipsi	MPT	2
Retina	ipsi	RET	1
Central part of ventronasal crescent of retina	ipsi	CVNcRET	2
Bed nucleus of the stria terminalis anterior division dorsomedial nucleus	ipsi	BSTdm	1
Bed nucleus of the stria terminalis posterior division	ipsi	BSTP	1
Hippocampus	ipsi	HIPP	-0.5
Indusium griseum anterior hippocampal continuation	ipsi	AHCCig	-0.5
Deep half of the deep pyramidal zone of the indusium griseum anterior hippocampal continuation	ipsi	AHCCigdhdp	-0.5
Hilus of the dentate gyrus	ipsi	Hil	0
Field CA1 of hippocampus	ipsi	CA1	0
Field CA1 of hippocampus adjacent to the dorsal subiculum	ipsi	CA1ads	-0.5
Field CA2 of hippocampus	ipsi	CA2	0
Field CA3 of hippocampus	ipsi	CA3	0
Intermediate subiculum	ipsi	InSu	2
Subiculum distal part	ipsi	Sdi	1
Subiculum dorsal part	ipsi	Sd	3
Subiculum dorsal distal part	ipsi	Sdd	3
Subiculum dorsal half	ipsi	Sdh	3
Subiculum dorsal part stratum radiatum deeper part	ipsi	SdLrde	2
Subiculum ventral part	ipsi	Sv	2
Subiculum ventral half	ipsi	Svh	0.5
Subiculum ventral part stratum radiatum	ipsi	SvSR	2
Parahippocampal region	ipsi	PHR	-0.5
Presubiculum	ipsi	PrS	3
Lamina principalis externa of the presubiculum	ipsi	PrSLpe	1
Lamina principalis interna of the presubiculum	ipsi	PrSLpi	3
Dorsal one half of the lamina principalis interna of the presubiculum	ipsi	PrSdhLpi	0.5
Presubiculum layer 2	ipsi	PrSL2	-0.5
Presubiculum layer 3	ipsi	PrSL3	-0.5
Presubiculum deep layers	ipsi	PrSDL	3
Presubiculum mid-septotemporal part	ipsi	PrSmst	1
Parasubiculum	ipsi	PaS	3
Parasubiculum layer 5	ipsi	PaSL5	2
Parasubiculum layer 6	ipsi	PaSL6	2
Ventral parasubiculum	ipsi	PaSV	1
Postsubiculum	ipsi	Post	3
Postsubiculum layer 4	ipsi	PostL4	1
Postsubiculum deep layers	ipsi	PostLd	-0.5
Postsubiculum layer 6	ipsi	PostL6	3
Postsubiculum boder of layer 3a and 4	ipsi	PostL3a4	-0.5
Entorhinal cortex	ipsi	Ent	0
Lateral entorhinal cortex layer 2	ipsi	LEntL2	1
Lateral entorhinal cortex layer 3	ipsi	LEntL3	1
Medial entorhinal cortex layer 2	ipsi	MEntLyL2	1
Medial entorhinal cortex layer 3	ipsi	MEntLyL3	1
Entorhinal cortex layer 4	ipsi	EntL4	-2
Retrosplenial regions	ipsi	RS	2
Retrosplenial ventral a	ipsi	RSv-a	1
Retrosplenial cortex	ipsi	RSCx	2
Retrosplenial dysgranular cortex	ipsi	RSdys	1
Retrosplenial granular cortex subdivisions	ipsi	RSGsu	2
Retrosplenial granular a cortex layer 5	ipsi	RSGa5	2
Retrosplenial granular a cortex layer 6	ipsi	RSGa6	2
Retrosplenial granular b cortex layer 5	ipsi	RSGb5	2
Retrosplenial granular b cortex layer 6	ipsi	RSGb6	2
Retrosplenial granular cortex b region rostrocaudal middle layers	ipsi	RSGbrcmL	2
Area 29a	ipsi	A29a	1
Area 29a layer 6 deep part	ipsi	A29aL6d	1
Area 29b layer 6 deep part	ipsi	A29bL6d	1
Area 29d caudal part layer 6 deep part	ipsi	A29dCL6d	1
Retrosplenial granular cortex c region	ipsi	RSGc	1
Retrosplenial granular cortex caudal part layer 6 deep part	ipsi	RSGc6d	1
Retrosplenial granular cortex caudal part caudal part	ipsi	RSGcc	1
Retrosplenial granular cortex layer 5	ipsi	RSGL5	3
Retrosplenial granular cortex layer 6	ipsi	RSGL6	3
Retrosplenial granular cortex rostral part	ipsi	RSGr	2.5
Cerebral cortex layer 1	ipsi	CCL1	0
Cingulate cortex	ipsi	Cg	-0.5
Anterior cingulate cortex	ipsi	ACC	2
Anterior cingulate cortex layer 6	ipsi	ACCL6	1
Dorsal anterior cingulate cortex	ipsi	DACC	2
Ventral anterior cingulate cortex	ipsi	VACC	1
Cingulate cortex layer 6	ipsi	CgL6	-0.5
Posterior cingulate cortex	ipsi	PCC	3
Prelimbic cortex	ipsi	PrL	0
Infralimbic area	ipsi	iLA	0
Infralimbic cortex	ipsi	IL	-3
Frontal cortex area 2	ipsi	Fr2	2.5
Motoric regions	ipsi	M	2
Medial agranular prefrontal cortex	ipsi	AGm	0
Medial agranular prefrontal cortex layer 6	ipsi	AGmL6	1
Secondary visual cortex medial area	ipsi	V2M	0
Septal region	ipsi	SER	-0.5
Lateral septal nucleus ventral part	ipsi	LSV	3
Caudoventral septal region	ipsi	CVSER	-2
Gray matter of the floor of the 4th ventricle	ipsi	GMF4V	0

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong