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Rat connectome



Prelimbic cortex layer 5 right


Abbreviation
PrLL5
Color       
Superior regionsPrelimbic cortex deep layers

SynonymsAbbr.Language
Prelimbic cortex layer 5PrLL5 

SubregionsSide
Prelimbic cortex layer 5 aright

Output to

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal graycontraDLPAG-0.5
Ventral tegmental area A10 middle thirdcontraVTAmit-0.5
Nucleus of the solitary tractcontraSol0.5
Dorsal motor nucleus of vaguscontra101
Dorsal raphe nucleuscontraDR3
Medulla oblongata dorsomedial partcontraMeObDM-0.5
Mediodorsal thalamic nucleuscontraMD2
Mediodorsal thalamic nucleus central partcontraMDC1
Mediodorsal thalamic nucleus lateral partcontraMDL2
Mediodorsal thalamic nucleus medial partcontraMDM1
Submedius thalamic nucleuscontraSub1
Amygdaloid complexcontraAC-0.5
Basolateral amygdaloid nucleuscontraBL-0.5
Basomedial amygdaloid nucleuscontraBM-0.5
Lateral amygdaloid nucleuscontraLA-0.5
Central amygdaloid nucleuscontraCe-0.5
Interstitial nucleus of the posterior limb of the anterior commissure medial partcontraIPACM2
Anterior accumbenscontraAcbA0.5
Prelimbic cortexcontraPrL1
Medial longitudinal fasciculusipsimlf-2
Dorsolateral periaqueductal grayipsiDLPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG3
Lateral wing of ventrolateral periaqueductal grayipsiVLPAGLW1
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventrolateral periaqueductal gray middle levelipsiVLPAGmL3
Ventrolateral periaqueductal gray rostral partipsiPAGvlr1
Ventral tegmental area A10ipsiVTA-0.5
Ventral tegmental area A10 middle thirdipsiVTAmit-0.5
Nucleus of the solitary tractipsiSol1
Dorsal motor nucleus of vagusipsi103
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus midrostrocaudal partipsiDRmrc3
Dorsal raphe nucleus rostrocaudal partipsiDRrc3
Caudal wing of rostrocaudal dorsal raphe nucleusipsiDRrcCW1
Dorsal raphe nucleus rostrocaudal part middle levelipsiDRrcm3
Lateral wing of rostrocaudal dorsal raphe nucleusipsiDRrcLW1
Rostral wing of rostrocaudal dorsal raphe nucleusipsiDRrcRW1
Neuropil of dorsal raphe nucleusipsiDRnp3
Medial part of the gracile nucleusipsiGraMe-0.5
Medulla oblongata dorsomedial partipsiMeObDM-0.5
Tenia tectaipsiTT-0.5
Lateral hypothalamic areaipsiLH3
Anteromedial thalamic nucleusipsiAM1
Anteroventral thalamic nucleusipsiAV0.5
Mediodorsal thalamic nucleusipsiMD2
Mediodorsal thalamic nucleus central partipsiMDC1
Mediodorsal thalamic nucleus lateral partipsiMDL1
Mediodorsal thalamic nucleus medial partipsiMDM1
Submedius thalamic nucleusipsiSub2
Paraventricular thalamic nucleusipsiPV-0.5
Ventral medial nucleus of the thalamusipsiVMT3
Amygdaloid complexipsiAC-0.5
Basolateral amygdaloid nucleusipsiBL3
Basomedial amygdaloid nucleusipsiBM3
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV-0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv3
Central amygdaloid nucleus rostroventral partipsiCeRV1
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM2
Accumbens nucleusipsiAc3
Accumbens nucleus coreipsiAcbC3
Accumbens nucleus shellipsiAcbSh-0.5
Anterior accumbensipsiAcbA1
Medial accumbensipsiAcbM3
Dorsal striatumipsiCPud3
Ventral striatumipsiCPuv3
Entorhinal cortexipsiEnt3
Retrosplenial dorsal layer 1ipsiRSdL10.5
Retrosplenial dorsal layer 5ipsiRSdL50.5
Retrosplenial ventral part layer 1ipsiRSPvL10.5
Retrosplenial ventral part layer 5ipsiRSPvL50.5
Retrosplenial ventral part layer 6ipsiRSPvL60.5
Dorsal anterior cingulate cortex layer 3ipsiDACCL30.5
Dorsal anterior cingulate cortex layer 5ipsiDACCL52
Dorsal anterior cingulate cortex layer 6ipsiDACCL62
Dorsal anterior cingulate cortex layer 1ipsiDACCL12
Dorsal anterior cingulate cortex layer 2ipsiDACCL20.5
Ventral anterior cingulate cortex layer 1ipsiVACCL12
Ventral anterior cingulate cortex layer 2ipsiVACCL20.5
Ventral anterior cingulate cortex layer 3ipsiVACCL30.5
Ventral anterior cingulate cortex layer 5ipsiVACCL52
Ventral anterior cingulate cortex layer 6ipsiVACCL62
Prelimbic cortexipsiPrL3
Prelimbic cortex layer 1ipsiPrLL12
Prelimbic cortex layer 2ipsiPrLL20.5
Prelimbic cortex layer 3ipsiPrLL31
Prelimbic cortex layer 4ipsiPrLL41
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL62
Infralimbic cortexipsiIL-0.5
Infralimbic cortex layer 5ipsiILL52
Infralimbic cortex layer 6ipsiILL62
Insular cortexipsiICX3
Perirhinal cortexipsiA352
Ectorhinal cortexipsiA361
Postrhinal cortexipsiPOR0.5
Area between retrosplenial cortex and secondary visual cortex medial areaipsiRSCbV2m3
Precommissural nucleusipsiPrC-0.5
AqueductipsiAq-2
Intermediolateral cell column T8ipsiIMLT8-0.5
Intermediolateral cell column T9ipsiIMLT9-0.5
Intermediolateral cell column T10ipsiIMLT10-0.5
Intermediolateral cell column T11ipsiIMLT11-0.5
Intermediolateral cell column T12ipsiIMLT12-0.5

Input from

NameSideAbbr.WeightDetails
Basolateral amygdaloid nucleuscontraBL1
Anterior basolateral nucleuscontraBLA1
Area 29b caudalmost partcontraA29bcm0.5
Prelimbic cortexcontraPrL1.5
Superficial layers of the posterior part of the agranular insular cortexcontraAIPsL0.5
Agranular insular cortex posterior part layer 5contraAIPL50.5
Agranular insular cortex posterior part layer 6contraAIPL60.5
Perirhinal cortexcontraA351.5
Secondary visual cortex medial area medial part layer 2contraV2MMeL21
Secondary visual cortex medial area medial part layer 3contraV2MMeL31
Secondary visual cortex medial area medial part layer 4contraV2MMeL41
Secondary visual cortex medial area medial part layer 5contraV2MMeL51
Secondary visual cortex medial area medial part layer 6contraV2MMeL61
Secondary visual cortex lateral part of the medial area layer 3contraV2MLaL31
Secondary visual cortex lateral part of the medial area layer 4contraV2MLaL41
Secondary visual cortex lateral part of the medial area layer 5contraV2MLaL51
Secondary visual cortex lateral part of the medial area layer 6contraV2MLaL61
Secondary visual cortex lateral part of the medial area layer 2contraV2MLaL21
Ventral tegmental area A10ipsiVTA3
Dorsal raphe nucleus rostrocaudal partipsiDRrc0.5
Rhomboid thalamic nucleusipsiRh2
Intermediodorsal thalamic nucleusipsiIMD2
Paraventricular thalamic nucleusipsiPV1
Reuniens thalamic nucleusipsiRe2
Basolateral amygdaloid nucleusipsiBL3
Anterior basolateral nucleusipsiBLA3
Posterior basolateral nucleusipsiBLP-0.5
Posterior basomedial nucleusipsiBMP0.5
Lateral nucleus caudal two-thirdsipsiLActt-0.5
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM1
Field CA1 of hippocampusipsiCA13
Mid-rostral level of dorsolateral entorhinal cortex layer 4ipsiDLEntMrL42
Mid-rostral level of dorsolateral entorhinal cortex layer 5ipsiDLEntMrL52
Mid-rostral level of dorsolateral entorhinal cortex layer 6ipsiDLEntMrL62
Lateral entorhinal cortexipsiLEnt2
Retrosplenial granular cortex b region rostrocaudal middle layersipsiRSGbrcmL1
Area 29d rostral partipsiA29dR0.5
Anterior cingulate cortexipsiACC2
Dorsal anterior cingulate cortex layer 5ipsiDACCL52
Dorsal anterior cingulate cortex layer 6ipsiDACCL62
Ventral anterior cingulate cortex layer 2ipsiVACCL20.5
Ventral anterior cingulate cortex layer 3ipsiVACCL30.5
Ventral anterior cingulate cortex layer 5ipsiVACCL52
Ventral anterior cingulate cortex layer 6ipsiVACCL62
Prelimbic cortexipsiPrL3
Prelimbic cortex layer 2ipsiPrLL20.5
Prelimbic cortex layer 3ipsiPrLL30.5
Prelimbic cortex layer 5ipsiPrLL52
Prelimbic cortex layer 6ipsiPrLL62
Infralimbic cortexipsiIL2
Infralimbic cortex layer 1ipsiILL12
Infralimbic cortex layer 2ipsiILL22
Infralimbic cortex layer 5ipsiILL52
Infralimbic cortex layer 6ipsiILL62
Infralimbic cortex layer 3ipsiILL32
Infralimbic cortex layer 4ipsiILL42
Frontal association cortexipsiFrA2
Agranular insular cortex dorsal partipsiAID2
Superficial layers of the posterior part of the agranular insular cortexipsiAIPsL0.5
Agranular insular cortex posterior part layer 5ipsiAIPL51
Agranular insular cortex posterior part layer 6ipsiAIPL60.5
Perirhinal cortexipsiA354
Perirhinal cortex midportion layer 4ipsiPRhMiL42
Perirhinal cortex midportion layer 5ipsiPRhMiL52
Perirhinal cortex midportion layer 6ipsiPRhMiL62
Perirhinal cortex rostral part layer 4ipsiPRroL42
Perirhinal cortex rostral part layer 5ipsiPRroL52
Perirhinal cortex rostral part layer 6ipsiPRroL62
Ectorhinal cortexipsiA364
Postrhinal cortexipsiPOR1
Lateral agranular prefrontal cortexipsiAGl2
Medial agranular prefrontal cortexipsiAGm2
Secondary visual cortex medial area medial part layer 2ipsiV2MMeL22
Secondary visual cortex medial area medial part layer 3ipsiV2MMeL32
Secondary visual cortex medial area medial part layer 4ipsiV2MMeL42
Secondary visual cortex medial area medial part layer 5ipsiV2MMeL52
Secondary visual cortex medial area medial part layer 6ipsiV2MMeL62
Secondary visual cortex lateral part of the medial area layer 3ipsiV2MLaL32
Secondary visual cortex lateral part of the medial area layer 4ipsiV2MLaL42
Secondary visual cortex lateral part of the medial area layer 5ipsiV2MLaL52
Secondary visual cortex lateral part of the medial area layer 6ipsiV2MLaL62
Secondary visual cortex lateral part of the medial area layer 2ipsiV2MLaL22

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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