University of Rostock

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Rat connectome



Subiculum stratum radiatum right


Abbreviation
Surad
Color       
Superior regionsSubiculum layers

SynonymsAbbr.Language
Subiculum stratum radiatumSurad 
Subiculum layer 3SuL3 
Subiculum stratum radiatum  
Subiculum stratum radiatumSLsr 
Subiculum stratum layer 2 Eng

Output to

NameSideAbbr.WeightDetails
Medial mammillary nucleus lateral partipsiML2
Lateral prefrontal cortexipsilPFC0.5
Ventral medial prefrontal cortexipsivmPFC0.5

Input from

NameSideAbbr.WeightDetails
Posterior basolateral nucleusipsiBLP3
Posterior basomedial nucleusipsiBMP3
Amygdalopiriform transition areaipsiAPir2
Medial amygdaloid nucleus anterodorsal partipsiMeAD2
Field CA1 of hippocampusipsiCA1-0.5
Field CA1 of hippocampus layer stratum pyramidal cellsipsiCA1L3spc-0.5
Field CA1 of hippocampus septal partipsiCA1sep-0.5
Medial entorhinal cortex layer 2 stellate neuronsipsiMEntLyL2st3
Medial entorhinal cortex layer 2 pyramidal like cellsipsiMEntLyL2pyL3
Medial entorhinal cortex layer 2 multipolar cellsipsiMEntLyL2mpc3
Medial entorhinal cortex layer 3 pyramidal neurons type 1ipsiMEntLyL3pyT14
Medial entorhinal cortex layer 3 pyramidal neurons type 2ipsiMEntLyL3pyT24
Medial entorhinal cortex layer 3 multipolar cellsipsiMEntLyL3mpc4
Medial entorhinal cortex layer 4 multipolar cellsipsiMEntLyL4mpc3
Medial entorhinal cortex layer 4 deep layer pyramid cellsipsiMEntLyL4pyc3
Medial entorhinal cortex layer 4 inverted pyramid cellsipsiMEntLyL4ipy3
Medial entorhinal cortex layer 4 vertical bipolar cellsipsiMEntLyL4vbc3
Medial entorhinal cortex layer 5 multipolar cellsipsiMEntLyL5mpc3
Medial entorhinal cortex layer 5 deep layer pyramid cellsipsiMEntLyL5pyc3
Medial entorhinal cortex layer 5 inverted pyramid cellsipsiMEntLyL5ipc3
Medial entorhinal cortex layer 5 vertical bipolar cellsipsiMEntLyL5vbc3
Medial entorhinal cortex layer 6 deep layer pyramidal cellsipsiMEntLyL6pyc2
Medial entorhinal cortex layer 6 vertical bipolar cellsipsiMEntLyL6vbc2
Medial entorhinal cortex layer 6 multipolar cellsipsiMEntLyL6mpc2
Medial entorhinal cortex layer 6 inverted pyramid cellsipsiMEntLyL6ipc2
Perirhinal cortexipsiA351

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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