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Rat connectome



Caudal forelimb motor area right


Abbreviation
CFMA
Color       
Superior regionsForelimb motor cortex

SynonymsAbbr.Language
Caudal forelimb motor areaCFMAEng
Caudal part of the granular cortex of the forelimb motor regions Eng

SubregionsSide
Elbow motor arearight
Shoulder motor arearight

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschcontraDk1
Red nucleus parvicellular partcontraROC1
Pontine nucleicontraPn-0.5
Pontine nucleus medial partcontraBPNm1
Reticular systemcontraRF3
Dorsolateral reticular formationcontraDLRF3
Cuneiforme nucleus ventral partcontraCnFV1
Medullary reticular nucleuscontraMdD1
Parvicellular reticular nucleuscontraPCRt3
Spinal trigeminal nucleus interpolar partcontraSp5I3
Trigeminal subnucleus caudaliscontra5SSC2
Nucleus of the solitary tract rostral partcontraSolro1
Cuneate nucleuscontraCu2
Cuneate nucleus rostral partcontraCuRo3
Cuneate nucleus ventral partcontraCuV3
GracilecontraGra2
Medulla oblongata rostral partcontraMeObR1
Spinomedullary junctioncontraSMJ3
Central medial thalamic nucleuscontraCM2
Paracentral thalamic nucleuscontraPC2
Posterior thalamic nuclear groupcontraPo2
Corpus callosumcontracc-2
Corticospinal tract in the dorsal funiculuscontracsdfu-2
Caudate putamencontraCPu2
Dorsolateral striatumcontraCPudl3
Rostral striatumcontraCPur1
Rostrolateral striatumcontraCPurl-0.5
Dorsal horn of spinal cordcontraDHMES1.5
Ventral gray of spinal cordcontraVGMES3
Intermediate zone of spinal cordcontraIzMES3
Cervical segment 7contraCS73
Cervical segment 8contraCS83
Nucleus of DarkschewitschipsiDk3
Lateral periaqueductal grayipsiLPAG1
Red nucleusipsiR2
Pararubral nucleusipsiPaR-0.5
Prerubral fieldipsiPR-0.5
Red nucleus magnocellular partipsiRMC-0.5
Red nucleus medial partipsiRmed-0.5
Rostral medial aspect of the red nucleusipsiRrmed1
Red nucleus parvicellular partipsiROC3
Red nucleus ventral partipsiRV-2
TectumipsiTEC2
Inferior colliculusipsiICOL0
Superior colliculus deep layersipsiSCd1
Substantia nigra A9ipsiSN2
Pons caudal partipsiPca3
Pontine grayipsiPG2
Pontine gray rostral partipsiPGro3
Pontine nucleiipsiPn2
Caudal pole region of the pontine nucleiipsiBPNcP0
Rostral one-third of the pontine nucleiipsiBPNrot3
Reticular systemipsiRF-2
Medial reticular formationipsiRFm1
Caudalmost mesencephalic reticular formationipsicmMRF-2
Parabrachial nucleus medialipsiPBnMe1
Medullary reticular nucleusipsiMdD1
Trapezoid bodyipsitz-2
Pons ventral to the cerebral peduncleipsiPcepe-2
Pons ventrolateral to the cerebral peduncleipsiPvLcepe3
Pons medial to the cerebral peduncleipsiPmcepe3
Pons dorsal to the cerebral peduncleipsiPdcepe3
Medulla oblongataipsiMeOb-2
Nucleus of the solitary tract rostral partipsiSolro1
Cuneate nucleusipsiCu2
Inferior oliveipsiIO2
Inferior olive dorsal nucleus medial partipsiIODm3
Inferior olive dorsal nucleus rostral partipsiIODR3
Caudal half of the inferior olive medial nucleusipsiIOMch3
Inferior olive principal nucleus lateral bendipsiIOPrLb3
Central medial thalamic nucleusipsiCM2
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleusipsiPC2
Posterior thalamic nuclear groupipsiPo2
Ventrolateral thalamic nucleusipsiVL2
Ventrobasal complexipsiVB2
Ventrobasal complex lateral partipsiVBL0
Ventromedial thalamic nucleusipsiVM2
Reticular thalamic nucleusipsiRt2
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT1
Cerebral peduncle basal partipsicp-2
Midportion of the cerebral peduncleipsimpcp-2
Corpus callosumipsicc-2
Corticospinal tract in the dorsal funiculusipsicsdfu-2
Basal gangliaipsiBG2
Caudate putamenipsiCPu2
Medial part of the dorsal striatumipsiCPumed-2
Dorsolateral striatumipsiCPudl3
Most lateral part of the dorsolateral striatumipsiCPudlmL3
Rostrolateral striatumipsiCPurl-0.5
Subthalamic nucleusipsiSTh2
Anterior cingulate cortexipsiACC2
Insular cortexipsiICX2
Perirhinal cortexipsiA352
Rostral forelimb motor areaipsiRFMA2
Hindlimb motor cortex caudal partipsiHMCxC-0.5
Medial agranular prefrontal cortexipsiAGm2
Primary somatosensory cortexipsiS12
Secondary somatosensory cortexipsiS22
Spinal cordipsiMES1
Ventral gray of spinal cordipsiVGMES1
Intermediate zone of spinal cordipsiIzMES1
Pyramidal tractipsipy-2
Ventral funiculusipsivf-2
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS70.5
Cervical segment 8ipsiCS80.5
Ventral to the intermediate spinal gray matteripsiVimsgm1.5

Input from

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschcontraDk1
Pontine nucleus medial partcontraBPNm1
Reticular systemcontraRF3
Dorsolateral reticular formationcontraDLRF3
Cuneiforme nucleus ventral partcontraCnFV1
Medullary reticular nucleuscontraMdD1
Parvicellular reticular nucleuscontraPCRt3
Spinal trigeminal nucleus interpolar partcontraSp5I3
Trigeminal subnucleus caudaliscontra5SSC2
Nucleus of the solitary tract rostral partcontraSolro1
Cuneate nucleuscontraCu2
Cuneate nucleus rostral partcontraCuRo3
Cuneate nucleus ventral partcontraCuV3
GracilecontraGra2
Medulla oblongata rostral partcontraMeObR1
Spinomedullary junctioncontraSMJ3
Central medial thalamic nucleuscontraCM2
Paracentral thalamic nucleuscontraPC2
Posterior thalamic nuclear groupcontraPo2
Corticospinal tract in the dorsal funiculuscontracsdfu-2
Caudate putamencontraCPu2
Dorsolateral striatumcontraCPudl-0.5
Rostrolateral striatumcontraCPurl-0.5
Dorsal horn of spinal cordcontraDHMES1.5
Ventral gray of spinal cordcontraVGMES3
Intermediate zone of spinal cordcontraIzMES3
Nucleus of DarkschewitschipsiDk3
Lateral periaqueductal grayipsiLPAG1
Red nucleusipsiR2
Rostral medial aspect of the red nucleusipsiRrmed1
Red nucleus ventral partipsiRV-2
TectumipsiTEC2
Inferior colliculusipsiICOL0
Superior colliculus deep layersipsiSCd1
Substantia nigra A9ipsiSN2
Pons caudal partipsiPca3
Pontine grayipsiPG2
Pontine gray rostral partipsiPGro3
Caudal pole region of the pontine nucleiipsiBPNcP0
Rostral one-third of the pontine nucleiipsiBPNrot3
Reticular systemipsiRF-2
Medial reticular formationipsiRFm1
Caudalmost mesencephalic reticular formationipsicmMRF-2
Parabrachial nucleus medialipsiPBnMe1
Medullary reticular nucleusipsiMdD1
Trapezoid bodyipsitz-2
Pons ventral to the cerebral peduncleipsiPcepe-2
Pons ventrolateral to the cerebral peduncleipsiPvLcepe3
Pons medial to the cerebral peduncleipsiPmcepe3
Pons dorsal to the cerebral peduncleipsiPdcepe3
Medulla oblongataipsiMeOb-2
Nucleus of the solitary tract rostral partipsiSolro1
Cuneate nucleusipsiCu2
Inferior oliveipsiIO2
Inferior olive dorsal nucleus medial partipsiIODm3
Inferior olive dorsal nucleus rostral partipsiIODR3
Caudal half of the inferior olive medial nucleusipsiIOMch3
Inferior olive principal nucleus lateral bendipsiIOPrLb3
DiencephalonipsiDEC3
ThalamusipsiT-0.5
Anteroventral thalamic nucleusipsiAV3
Anteroventral thalamic nucleus caudodorsal partipsiAVcd3
Central medial thalamic nucleusipsiCM2
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC2
Parafascicular thalamic nucleusipsiPF3
Posterior thalamic nuclear groupipsiPo3
Mediodorsal thalamic nucleusipsiMD1.5
Ventrolateral thalamic nucleusipsiVL4
Ventrolateral thalamic nucleus caudodorsal partipsiVLcd3
Ventral posterolateral thalamic nucleusipsiVPL3
Ventral posterolateral thalamic nucleus medial partipsiVPLM-0.5
Ventral posterolateral thalamic nucleus rostral partipsiVPLro-0.5
Ventral posteromedial thalamic nucleusipsiVPM0
Ventrobasal complex lateral partipsiVBL0
Ventrobasal thalamic complex ventromedial partipsiVBvm3
Ventromedial thalamic nucleusipsiVM3
Laterodorsal thalamic nucleusipsiLD0
Posterior groupipsiPTG3
Posterior group caudal partipsiPTGC3
Posteromedial thalamic nucleusipsiPMTN3
Dorsal part of the posterior groupipsiDPTG2
Ventral medial nucleus of the thalamusipsiVMT3
Zona incertaipsiZI3
Pretectal regionipsiPRT3
Anterior pretectal nucleusipsiAPT1
Cerebral peduncle basal partipsicp-2
Midportion of the cerebral peduncleipsimpcp-2
Corpus callosumipsicc-2
Corticospinal tract in the dorsal funiculusipsicsdfu-2
Caudate putamenipsiCPu2
Dorsolateral striatumipsiCPudl-0.5
Rostrolateral striatumipsiCPurl-0.5
Subthalamic nucleusipsiSTh2
Parietal rhinal cortexipsiPaRH1
Anterior cingulate cortexipsiACC2
Parietal cortex ventral areaipsiParV3
Insular cortexipsiICX2
Perirhinal cortexipsiA352
Rostral forelimb motor areaipsiRFMA2
Medial agranular prefrontal cortexipsiAGm2
Primary somatosensory cortexipsiS12
Primary somatosensory cortex barrel fieldipsiS1BF-0.5
Secondary somatosensory cortexipsiS22
Spinal cordipsiMES1
Ventral gray of spinal cordipsiVGMES1
Intermediate zone of spinal cordipsiIzMES1
Pyramidal tractipsipy-2
Ventral funiculusipsivf-2
Ventral to the intermediate spinal gray matteripsiVimsgm1.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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