University of Rostock

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Rat connectome



Bulbospongiosus muscle left


Abbreviation
Muscbsp
Color       
Superior regionsPelvic

SynonymsAbbr.Language
Bulbospongiosus muscleMuscbsp 

SubregionsSide
Ventral bulbospongiosus muscleleft
Dorsal bulbospongiosus muscleleft

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
Red nucleusipsiR3
Lateral part of the red nucleus magnocellular partipsiRMCL-0.5
Red nucleus magnocellular part caudal regionipsiRMCC3
Red nucleus magnocellular part ventral partipsiRMCV-0.5
Red nucleus ventrolateral partipsiRveL-0.5
Red nucleus hindlimb regionipsiRhLr0.5
Lateral portion of the intermediate white layer of the superior colliculusipsiInWhL1
Substantia nigra lateral partipsiSNL1
Ventral tegmental area A10ipsiVTA1
Ventrolateral tegmental areaipsiVLTg1
Purkinje cells of the vermisipsiVERMPJ1
Purkinje cells of the medial cerebellar cortexipsiCERCMPj1
Dorsolateral humpipsiCERcndl1
Interposed cerebellar nuclei medial partipsiICNM1
Dorsal part of lateral cerebellar nucleusipsiCERLD1
Medial cerebellar nucleus middle subdivisionipsiMMCM1
Medial cerebellar nucleus medial divisionipsiMedme1
A5 noradrenaline cellsipsiA53
Barringtons nucleusipsiBar3
Locus coeruleusipsiLC2
Parapyramidal nucleusipsiPPy3
Reticular systemipsiRF2
Caudoventrolateral reticular nucleusipsiCVLR-0.5
Magnocellular reticular nucleus caudal partipsiNRMCC-0.5
Magnocellular reticular nucleus lateral partipsiNRMCL1
Magnocellular reticular nucleus rostrocaudal extentipsiNRMCrce3
Medial reticular formation dorsal partipsiRFmD-0.5
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus oral part lateral partipsiPnOL1
Subcoerulear areaipsiSCoe2
Pontine reticular nucleus caudal partipsiPNC1
Lateral part of pontine reticular nucleus caudal partipsiPNCL1
Cuneiforme nucleus caudal partipsiCnFc-0.5
Koelliker Fuse nucleusipsiKF1
Gigantocellular reticular nucleusipsiGi3
Lateral reticular nucleusipsiLRt1
Lateral reticular nucleus magnocellular partipsiLRtMC-0.5
Dorsal medial medullary reticular nucleusipsiMMdDD-0.5
Parvicellular reticular nucleusipsiPCRt1
Subcoeruleus nucleusipsiSubC0.5
Facial nucleusipsi71
Hypoglossal nucleus rostral partipsi12Sr1
Spinal vestibular nucleusipsiSpVe1
Spinal vestibular nucleus caudal partipsiSpVeC1
Vestibular nucleiipsiVnc-0.5
Medial vestibular nucleus caudal partipsiMVeP1
Lateral vestibular nucleusipsiLVe3
Nucleus of the solitary tractipsiSol1
Caudal raphe nucleiipsiRANc-0.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa1
Ventral lateral medulla oblongataipsiMVL3
Reticular formation of the caudal ventrolateral medullaipsiRFCVLM3
Paragigantocellular reticular nucleusipsiPGi1
Dorsal paragigantocellular nucleusipsiDPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi3
Lateral paragigantocellular nucleus rostrocaudal extentipsiLPGirce3
Retroambiguus nucleusipsiRAmb3
Ventromedial medulla oblongataipsiMeObvm-10
Substantia innominataipsiSI1
Lateral preoptic areaipsiLPO0
Medial preoptic areaipsiMPA2
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx1
Anterior hypothalamic areaipsiAHA1
Posterior hypothalamic areaipsiPHA2
Paraventricular hypothalamic nucleusipsiPa2
ThalamusipsiT1
Zona incertaipsiZI1
Bed nucleus of the stria terminalisipsiBST1
Bed nucleus of the stria terminalis ventral partipsiBNSTv1
Central amygdaloid nucleusipsiCe1
Globus pallidusipsiGP1
Medial globus pallidusipsiMGP1
Caudate putamenipsiCPu1
Cerebral cortexipsiCEC1
Cingulate cortex area 1ipsiCg11
Cingulate cortex area 3ipsiCg31
Frontal cortex area 1ipsiFr13
Frontal cortex area 1 caudal partipsiFr1c3
Frontal cortex area 2ipsiFr21
Frontal cortex area 2 rostral partipsiFr2R1
Parietal association cortexipsiPtA3
Parietal cortex area 1ipsiPar11
Parietal cortex area 2ipsiPar21
Insular cortexipsiICX1
Lamina 1 of dorsal horn of spinal cordipsisDHMESL1-0.5
Lamina 2 of dorsal horn of spinal cordipsisDHMESL2-0.5
Spinal cord layer 7 C3ipsiSCL7C31
Spinal cord layer 8 C3ipsiSCL8C31
Spinal cord layer 7 C4ipsiSCL7C41
Spinal cord layer 8 C4ipsiSCL8C41
Spinal cord layer 7 C5ipsiSCL7C51
Spinal cord layer 8 C5ipsiSCL8C51
Spinal cord layer 7 C6ipsiSCL7C61
Spinal cord layer 8 C6ipsiSCL8C61
Spinal cord layer 7 C7ipsiSCL7C71
Spinal cord layer 8 C7ipsiSCL8C71
Spinal cord layer 7 C8ipsiSCL7C81
Spinal cord layer 8 C8ipsiSCL8C81
Intermediolateral cell column T1ipsiIMLT1-0.5
Spinal cord layer 7 T1ipsiSCL7T11
Spinal cord layer 8 T1ipsiSCL8T11
Intermediolateral cell column T2ipsiIMLT2-0.5
Intermediolateral cell column T3ipsiIMLT3-0.5
Intermediolateral cell column T4ipsiIMLT4-0.5
Intermediolateral cell column T5ipsiIMLT5-0.5
Intermediolateral cell column T6ipsiIMLT6-0.5
Intermediolateral cell column T7ipsiIMLT7-0.5
Intermediolateral cell column T8ipsiIMLT8-0.5
Intermediolateral cell column T9ipsiIMLT9-0.5
Intermediolateral cell column T10ipsiIMLT10-0.5
Intermediolateral cell column T11ipsiIMLT11-0.5
Intermediolateral cell column T12ipsiIMLT12-0.5
Intercalated nucleus T13ipsiIClT130.5
Intermediolateral cell column T13ipsiIMLT13-0.5
Central autonomic nucleus of lumbar segment 1ipsiCAAL10.5
Intermediolateral cell column L1ipsiIMLL1-10
Intermediomedial cell column L1ipsiIMML1-0.5
Area X L1ipsiSCL10L1-10
Dorsal horn L1ipsiDHL1-10
Dorsal gray commissure at thel level of L1ipsiL1dgc-10
Central autonomic nucleus of lumbar segment 2ipsiCAAL20.5
Intermediolateral cell column L2ipsiIMLL2-10
Intermediomedial cell column L2ipsiIMML2-0.5
Area X L2ipsiSCL10L2-10
Dorsal horn L2ipsiDHL2-10
Dorsal gray commissure at the level of L2ipsiL2dgc-10
Central autonomic nucleus of lumbar segment 3ipsiCAAL30.5
Dorsal root ganglion L3ipsiDRGL31
Intermediomedial cell column L3ipsiIMML3-0.5
Area X L3ipsiSCL10L3-10
Dorsal horn L3ipsiDHL3-10
Spinal cord layer 5 L3ipsiSCL5L32
Spinal cord layer 6 L3ipsiSCL6L32
Spinal cord layer 4 L3ipsiSCL4L31
Intermediate portion of spinal cord layer 4 L3ipsiSCL4L3im-10
Spinal cord layer 7 L3ipsiSCL7L32
Spinal cord layer 8 L3ipsiSCL8L31
Dorsal gray commissure at thel level of L3ipsiL3dgc-10
Dorsal root ganglion L4ipsiDRGL41
Intermediomedial cell column L4ipsiIMML4-0.5
Area X L4ipsiSCL10L4-10
Dorsal horn L4ipsiDHL4-10
Spinal cord layer 5 L4ipsiSCL5L42
Spinal cord layer 5 medial part L4ipsiSCL5mpL4-0.5
Spinal cord layer 6 L4ipsiSCL6L42
Spinal cord layer 6 medial part L4ipsiSCL6mpL4-0.5
Spinal cord layer 4 L4ipsiSCL4L41
Intermediate portion of spinal cord layer 4 L4ipsiSCL4L4im-10
Spinal cord layer 7 L4ipsiSCL7L42
Spinal cord layer 8 L4ipsiSCL8L41
Dorsal gray commissure at thel level of L4ipsiL4dgc-10
Dorsolateral nucleus lumbal segment 5ipsiDLNL5-0.5
Medial division of dorsolateral nucleus lumbal segment 5ipsiMDLNL5-0.5
Dorsomedial nucleus lumbal segment 5ipsiDMNL5-0.5
Dorsal root ganglion L5ipsiDRGL51
Intermediomedial cell column L5ipsiIMML5-0.5
Intermediomedial cell column L5 Onufs nucleus dorsolateral partipsiIMML5onudL-0.5
Intermediomedial cell column L5 Onufs nucleus dorsolateral part lateral partipsiIMML5onudLL-0.5
Intermediomedial cell column L5 Onufs nucleus dorsomedial partipsiIMML5onudM-0.5
Lateral part of the dorsomedial nucleus Onuf at L5ipsiIMML5onuL-10
Lumbar dorsal commissural nucleus L5ipsiLDComL5-10
Area X L5ipsiSCL10L5-10
Dorsal horn L5ipsiDHL5-10
Spinal cord layer 5 L5ipsiSCL5L52
Spinal cord layer 5 medial part L5ipsiSCL5mpL5-0.5
Spinal cord layer 6 L5ipsiSCL6L52
Spinal cord layer 6 medial part L5ipsiSCL6mpL5-0.5
Spinal cord layer 4 L5ipsiSCL4L51
Spinal cord layer 1 L5ipsiSCL1L51
Spinal cord layer 2 L5ipsiSCL2L51
Spinal cord layer 7 L5ipsiSCL7L52
Spinal cord layer 8 L5ipsiSCL8L51
Interneuron groups of layer 9 L5ipsiiGL9L5-10
Spinal cord layer 9 L5ipsiSCL9L53
Sacral parasympathetic nucleus at the lumbar segment 5ipsiL5spsy-10
Dorsolateral nucleus lumbal segment 6ipsiDLNL6-0.5
Medial part of the dorsolateral nucleus lumbal segment 6ipsiMDLNL6-0.5
Dorsomedial nucleus lumbal segment 6ipsiDMNL6-0.5
Dorsal root ganglion L6ipsiDRGL61
Intermediomedial cell column L6ipsiIMML6-0.5
Intermediomedial cell column L6 Onufs nucleus dorsolateral partipsiIMML6onudL-0.5
Intermediomedial cell column L6 Onufs nucleus dorsolateral part lateral partipsiIMML6onudLL-0.5
Lateral part of the dorsomedial nucleus Onuf at L6ipsiIMML6onudLa-10
Intermediomedial cell column L6 Onufs nucleus dorsomedial partipsiIMML6onudM-0.5
Area X L6ipsiSCL10L6-0.5
Dorsal horn L6ipsiDHL6-10
Spinal cord layer 5 L6ipsiSCL5L62
Spinal cord layer 5 medial part L6ipsiSCL5mpL6-0.5
Spinal cord layer 6 L6ipsiSCL6L62
Spinal cord layer 4 L6ipsiSCL4L61
Spinal cord layer 1 L6ipsiSCL1L61
Spinal cord layer 2 L6ipsiSCL2L61
Spinal cord layer 7 L6ipsiSCL7L62
Spinal cord layer 8 L6ipsiSCL8L61
Interneuron groups of layer 9 L6ipsiiGL9L6-10
Spinal cord layer 9 L6ipsiSCL9L63
Sacral parasympathetic nucleus at the lumbar segment 6ipsiL6spsy-10
Dorsal gray commissure at thel level of L6ipsiL6dgc-10
Dorsal root ganglion S1ipsiDRGS11
Sacral parasympathetic nucleus S1ipsiSPSyS1-10
Area X S1ipsiSCL10S1-0.5
Dorsal horn S1ipsiDHS1-10
Spinal cord layer 5 S1ipsiSCL5S12
Spinal cord layer 6 S1ipsiSCL6S12
Spinal cord layer 4 S1ipsiSCL4S11
Spinal cord layer 7 S1ipsiSCL7S12
Spinal cord layer 8 S1ipsiSCL8S11
Dorsal gray commissure at thel level of S1ipsiS1dgc-10
Dorsomedial nucleus of sacral segment 1ipsiSa1dm-10
Central graycontraCG-0.5
Red nucleuscontraR3
Superior colliculus intermediate white layercontraSAI1
Substantia nigra lateral partcontraSNL1
Purkinje cells of the vermiscontraVERMPJ1
Purkinje cells of the medial cerebellar cortexcontraCERCMPj1
Dorsolateral humpcontraCERcndl1
Interposed cerebellar nuclei medial partcontraICNM1
Dorsal part of lateral cerebellar nucleuscontraCERLD1
Medial cerebellar nucleus middle subdivisioncontraMMCM-0.5
Medial cerebellar nucleus medial divisioncontraMedme1
A5 noradrenaline cellscontraA50.5
Barringtons nucleuscontraBar-0.5
Caudoventrolateral reticular nucleuscontraCVLR-0.5
Magnocellular reticular nucleus caudal partcontraNRMCC-0.5
Magnocellular reticular nucleus lateral partcontraNRMCL-0.5
Cuneiforme nucleus caudal partcontraCnFc-0.5
Gigantocellular reticular nucleuscontraGi3
Facial nucleuscontra7-0.5
Hypoglossal nucleus rostral partcontra12Sr-0.5
Lateral vestibular nucleuscontraLVe3
Nucleus of the solitary tractcontraSol1
Reticular formation of the caudal ventrolateral medullacontraRFCVLM3
Paragigantocellular reticular nucleuscontraPGi-0.5
Lateral paragigantocellular nucleuscontraLPGi3
Retroambiguus nucleuscontraRAmb3
Medial preoptic areacontraMPA2
Lateral hypothalamic areacontraLH1
Lateral hypothalamic area perifornical partcontraPFx1
Posterior hypothalamic areacontraPHA2
Paraventricular hypothalamic nucleuscontraPa2
ThalamuscontraT1
Central amygdaloid nucleuscontraCe1
Globus palliduscontraGP1
Medial globus palliduscontraMGP1
Caudate putamencontraCPu1
Cingulate cortex area 1contraCg1-0.5
Cingulate cortex area 3contraCg3-0.5
Frontal cortex area 1contraFr13
Frontal cortex area 1 caudal partcontraFr1c-0.5
Frontal cortex area 2 rostral partcontraFr2R-0.5
Parietal association cortexcontraPtA3
Parietal cortex area 1contraPar1-0.5
Parietal cortex area 2contraPar2-0.5
Insular cortexcontraICX-0.5
Spinal cord layer 5 L3contraSCL5L31
Spinal cord layer 6 L3contraSCL6L31
Spinal cord layer 4 L3contraSCL4L31
Intermediate portion of spinal cord layer 4 L3contraSCL4L3im-10
Spinal cord layer 7 L3contraSCL7L31
Spinal cord layer 8 L3contraSCL8L31
Spinal cord layer 5 L4contraSCL5L41
Spinal cord layer 6 L4contraSCL6L41
Spinal cord layer 4 L4contraSCL4L41
Intermediate portion of spinal cord layer 4 L4contraSCL4L4im-10
Spinal cord layer 7 L4contraSCL7L41
Spinal cord layer 8 L4contraSCL8L41
Dorsolateral nucleus lumbal segment 5contraDLNL5-10
Dorsomedial nucleus lumbal segment 5contraDMNL5-0.5
Spinal cord layer 5 L5contraSCL5L51
Spinal cord layer 6 L5contraSCL6L51
Spinal cord layer 4 L5contraSCL4L51
Spinal cord layer 7 L5contraSCL7L51
Spinal cord layer 8 L5contraSCL8L51
Interneuron groups of layer 9 L5contraiGL9L5-10
Dorsolateral nucleus lumbal segment 6contraDLNL6-10
Dorsomedial nucleus lumbal segment 6contraDMNL6-0.5
Spinal cord layer 5 L6contraSCL5L61
Spinal cord layer 6 L6contraSCL6L61
Spinal cord layer 4 L6contraSCL4L61
Spinal cord layer 7 L6contraSCL7L61
Spinal cord layer 8 L6contraSCL8L61
Interneuron groups of layer 9 L6contraiGL9L6-10
Spinal cord layer 5 S1contraSCL5S11
Spinal cord layer 6 S1contraSCL6S11
Spinal cord layer 4 S1contraSCL4S11
Spinal cord layer 7 S1contraSCL7S11
Spinal cord layer 8 S1contraSCL8S11
Lumbar sympathetic ganglia level L 1ipsiAutoLSGL1-0.5
Lumbar sympathetic ganglia level L 2ipsiAutoLSGL2-0.5
Thoracic sympathetic ganglion at level T 10ipsiAutoTSG10-0.5
Thoracic sympathetic ganglion at level T 11ipsiAutoPaGTsym11-0.5
Thoracic sympathetic ganglion at level T 12ipsiAutoPaGTsym12-0.5
Thoracic sympathetic ganglion at level T 13ipsiAutoPaGTsym13-0.5
Thoracic sympathetic ganglion at level T 9ipsiAutoTSG9-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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