University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Mediolateral striatum left


Abbreviation
CPuml
Color       
Superior regionsCaudate putamen

SynonymsAbbr.Language
Mediolateral striatumCPuml 

SubregionsSide
Mediolateral striatum chemoarchitectonic compartmentsleft

Input from

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC-0.5
Substantia nigra compact part medial tieripsiSNCM-0.5
Substantia nigra compact part rostrocaudal partipsiSNCrc-0.5
Substantia nigra reticular part mediolateral partipsiSNRmL-0.5
Intralaminar nuclei of the dorsal thalamusipsiILM-0.5
Central medial thalamic nucleusipsiCM1
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF1
Midline group of the dorsal thalamusipsiMTN2
Ventro anterior thalamic nucleusipsiVA1
Ventrolateral thalamic nucleusipsiVL1
Ventromedial thalamic nucleusipsiVM1
Intralaminar nucleiipsiILN2
Ventral medial nucleus of the thalamusipsiVMT-0.5
Posterior dygranular zone between whisker and trunk representation layer 5ipsiS1pdyL5-0.5
Posterior dygranular zone between whisker and trunk representation layer 6ipsiS1pdyL6-0.5
Posterior dygranular zone between whisker and trunk representation layer 5contraS1pdyL5-0.5
Posterior dygranular zone between whisker and trunk representation layer 6contraS1pdyL6-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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