University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Caudal one third of the substantia nigra left


Abbreviation
SNcot
Color       
Superior regionsSubstantia nigra caudal part

SynonymsAbbr.Language
Caudal one third of the substantia nigraSNcotEng
Caudal third of the substantia nigra Eng

Output to

NameSideAbbr.WeightDetails
Paralemniscal nucleusipsiPL1.5
Pedunculopontine tegmental nucleusipsiPPTg1.5
Pontine reticular nucleus oral partipsiPnO1.5
Pontine reticular nucleus oral part central partipsiPnOC1.5
Cuneiforme nucleus caudal partipsiCnFc1.5

Input from

NameSideAbbr.WeightDetails
Central caudal striatumipsiCPucc1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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