University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Substantia nigra compact part rostral tier left


Abbreviation
SNCr
Color       
Superior regionsSubstantia nigra compact part

SynonymsAbbr.Language
Substantia nigra compact part rostral tierSNCrEng

SubregionsSide
Substantia nigra compact part rostral tier dorsolateral regionleft
Substantia nigra compact part rostral thirdleft

Output to

NameSideAbbr.WeightDetails
Caudate putamenipsiCPu3
Caudate putamen basolateral partipsiCPuBL-0.5
Dorsal striatumipsiCPud3
Dorsally in the medial part of the dorsal striatumipsiCPudmd3
Rostral striatumipsiCPur3
Caudate putamen rostrobasal partipsiCPurb-0.5
Rostrocaudal region of the caudate putamenipsiRCCPu-0.5
Piriform cortexipsiPir-0.5
Olfactory tubercleipsiTuO-0.5

Input from

NameSideAbbr.WeightDetails
Ventral tegmental area rostral ventrolateral partipsiVTARVL1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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