University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Pedunculopontine tegmental nucleus mid level left


Abbreviation
PPTgmL
Color       
Superior regionsPedunculopontine tegmental nucleus

SynonymsAbbr.Language
Pedunculopontine tegmental nucleus mid levelPPTgmLEng

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG3
Tegmental areaipsiTGA3
Central tegmental fieldipsiTGAC3
Substantia nigra compact partipsiSNC1.5
Substantia nigra reticular partipsiSNR1.5
Locus coeruleusipsiLC1.5
Deep mesencephalic nucleusipsiDpMe2
Dorsal raphe nucleusipsiDR1.5
Basal forebrainipsiBAF1.5
Tuberomammillary nucleusipsiTuM1
Lateral hypothalamic areaipsiLH1.5
Intralaminar nucleiipsiILN1.5
Zona incertaipsiZI2
Caudate putamenipsiCPu1.5
Frontal association cortexipsiFrA1
Septal regionipsiSER1

Input from

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC1
Substantia nigra reticular partipsiSNR1
Locus coeruleusipsiLC1
Deep mesencephalic nucleusipsiDpMe2
Dorsal raphe nucleusipsiDR2.5
Basal forebrainipsiBAF1.5
Tuberomammillary nucleusipsiTuM1
Lateral hypothalamic areaipsiLH2
Intralaminar nucleiipsiILN0
Zona incertaipsiZI2
Caudate putamenipsiCPu0
Frontal association cortexipsiFrA2
Septal regionipsiSER1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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