Department of Anatomy University of Rostock

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Rat connectome

Primary somatosensory cortex barrel field layer 2 left

Abbreviation	S1BF2
Color
Superior regions	Primary somatosensory cortex barrel field supragranular layers

Synonyms	Abbr.	Language
Primary somatosensory cortex barrel field layer 2	S1BF2

Subregions	Side
Primary somatosensory cortex barrel field layer 2 pyramidal neurons	left

Output to

Name	Side	Abbr.	Weight	Details
Medial laterodorsal thalamic nucleus rostromedial laterodorsal thalamic nucleus transition region	ipsi	LDmLDmrt	1
Reticular thalamic nucleus	ipsi	Rt	1
Anterior pretectal nucleus	ipsi	APT	1
Striatum	ipsi	STR	0
Lateral agranular prefrontal cortex	ipsi	AGl	-0.5
Whiskers motor cortex	ipsi	WMCx	1
Primary somatosensory cortex barrel field layer 5a	ipsi	S1BF5a	3
Primary somatosensory cortex barrel field layer 6	ipsi	S1BF6	2
Forelimb region of secondary somatosensory cortex	ipsi	S2FL	2
Dorsal geniculate nucleus lateral part	ipsi	DLGl	0
Striatum	contra	STR	0
Primary somatosensory cortex barrel field layer 5a	contra	S1BF5a	-0.5

Input from

Name	Side	Abbr.	Weight	Details
Ventral posterior thalamic complex	ipsi	VPT	-0.5
Ventral posterior thalamic complex medial part	ipsi	VPTm	-0.5
Mid-dorsoventral of the ventral posterolateral thalamic nucleus	ipsi	VPLmdv	1
Ventral posteromedial thalamic nucleus	ipsi	VPM	1
Posteromedial barrel subfield vibrissae row C supragranular layers	ipsi	PMBSFCsL	0.5
Primary somatosensory cortex barrel field layer 2 and layer 3 inhibitory cells of layer 6	ipsi	S1BFL2L3iL6	-0.5
Vibrissal follicle complex C3	ipsi	VFCC3	1

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong

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