University of Rostock

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Rat connectome



Spinal trigeminal nucleus caudal part layer 5 left


Abbreviation
Sp5CaL5
Color       
Superior regionsSpinal trigeminal nucleus caudal part deep layers

SynonymsAbbr.Language
Spinal trigeminal nucleus caudal part layer 5Sp5CaL5 
Spinal trigeminal nucleus caudal part layer 5Sp5CL5 

SubregionsSide
Spinal trigeminal nucleus caudal part superficial layer 5left

Output to

NameSideAbbr.WeightDetails
A5 noradrenaline cellsipsiA53
Parabrachial nucleusipsiPB1
Parabrachial nucleus dorsolateral partipsiPBDL3
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha partipsiGiA3
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus oral partipsiSp5O2
Spinal trigeminal nucleus rostral partipsiSp5ncR2
Raphe magnus nucleusipsiRMg3
Raphe obscurus nucleusipsiROb3
Raphe pallidus nucleusipsiRPa3
Superior salivatory nucleusipsiSuS3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Posterior thalamic nuclear groupipsiPo0.5
Lateral part of ventral posteromedial thalamic nucleusipsiVPML0.5
Medial part of ventral posteromedial thalamic nucleusipsiVPMm0.5
Ventral posteromedial thalamic nucleus intermediate partipsiVPMi0.5
Parabrachial nucleuscontraPB3
Principal sensory trigeminal nucleuscontraPr51
Spinal trigeminal nucleus interpolar partcontraSp5I1
Spinal trigeminal nucleus oral partcontraSp5O1
Posterior thalamic nuclear groupcontraPo3
Lateral part of ventral posteromedial thalamic nucleuscontraVPML1
Medial part of ventral posteromedial thalamic nucleuscontraVPMm1
Ventral posteromedial thalamic nucleus intermediate partcontraVPMi1

Input from

NameSideAbbr.WeightDetails
Gigantocellular reticular nucleusipsiGi-0.5
Gigantocellular reticular nucleus alpha partipsiGiA-0.5
Parvicellular reticular nucleus rostral portionipsipRNr3
Spinal trigeminal nucleus caudal partipsiSp5C-0.5
Trigeminal ganglionipsi5Gn3
Mandibular region of the trigeminal ganglion at the level of the entry of the mandibular nerveipsi5GnMaEm3
Caudal area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnCOM3
Rostral area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnROM3
Superficial part of the trigeminal ganglionipsi5GnS3
Raphe magnus nucleusipsiRMg-0.5
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa-0.5
Caudal pressor area of the caudal medullaipsiCPAMeObm1
Rostral part of the ventromedial medulla oblongataipsiRMeObvm-0.5
Primary somatosensory cortex barrel fieldipsiS1BF0.5
Trigeminal ganglioncontra5Gn-0.5
Primary somatosensory cortex barrel fieldcontraS1BF1
Secondary somatosensory cortex lingual nerve areacontraS2Li1
Secondary somatosensory cortex mental areacontraS2Me-0.5
Caudal part of the secondary somatosensory cortex inferior orbital areacontraS2iaC-0.5
Rostral part of the secondary somatosensory cortex inferior orbital areacontraS2iaR-0.5
Inferior alveolar nerveipsiialv-0.5
Auriculotemporal nerveipsi5V3Aute-0.5
Lingual nerveipsi5V3Li-0.5
Mental nerveipsiment-0.5
Mylohyoid nerveipsimyhy-0.5
Buccal nerveipsibucc-0.5
Lingual nervecontra5V3Li0.5
Mental nervecontrament-0.5
Inferior alveolar nervecontraialv-0.5
Lower incisoripsiOrgLoi3
Nociceptor of the intraoral cheek padipsiOrgBSicp-0.5
Fascial vibrissal follicle complexesipsiFVFC3
Straddler 2ipsiFstradL2-0.5
Straddler 3ipsiFstradL3-0.5
Straddler 4ipsiFstradL4-0.5
Straddler 5ipsiFstradL5-0.5
Supraorbital whiskersipsiSuOrW-0.5
Large supraorbital vibrissaeipsiLSuOrW1
Small supraorbital vibrissaeipsiSSuOrW1
Vibrissal follicle complexipsiVFC-0.5
Vibrissal follicle complex A1ipsiVFCA12
Vibrissal follicle complex A2ipsiVFCA22
Vibrissal follicle complex A3ipsiVFCA32
Vibrissal follicle complex A4ipsiVFCA42
Vibrissal follicle complex B1ipsiVFCB12
Vibrissal follicle complex B2ipsiVFCB22
Vibrissal follicle complex B3ipsiVFCB32
Vibrissal follicle complex B4ipsiVFCB42
Vibrissal follicle complex C1ipsiVFCC12
Vibrissal follicle complex C2ipsiVFCC22
Vibrissal follicle complex C3ipsiVFCC32
Vibrissal follicle complex C4ipsiVFCC42
Vibrissal follicle complex C5ipsiVFCC52
Vibrissal follicle complex D4ipsiVFCD4-0.5
Vibrissal follicle complex E1ipsiVFCE1-0.5
Vibrissal follicle complex slowly adapting type 2a primary afferentsipsiVFCsa2a-0.5
Mandibular auriculotemporal vibrissaipsiFVFCmat-0.5
Auriculotemporal vibrissaipsiFVFCaut-0.5
Upper lip hairipsiFVFCuLh-0.5
Eyelid hairipsiFVFCeLh1
Slowly adapting cutaneous receptors of facial skinipsiOrgBSheadsar-0.5
Guard hairipsiOrgGuH-0.5
Mystacial guard hairipsiOrgMGuH-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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