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Rat connectome



Gigantocellular reticular nucleus alpha part left


Abbreviation
GiA
Color       
Superior regionsGigantocellular reticular nucleus

SynonymsAbbr.Language
Gigantocellular reticular nucleus alpha partGiAEng
N. gigantocellularis pars alpha  
Reticularis gigantocellularis pars alpha  
Alpha portion of the principal nucleus Eng
Nucleus reticularis gigantocellularis pars alpha Eng
B3 cell groupB3Eng
Nucleus reticularis gigantocellularis pars alphaRgcalphaEng

SubregionsSide
B3 group dorsal and medial to mlfleft
B3 group in pontine raphe nucleileft
B3 group in raphe magnus nucleusleft
B6 group on floor of 4Vleft
Gigantocellular reticular nucleus alpha part caudal partleft
Gigantocellular reticular nucleus alpha part medial partleft
Gigantocellular reticular nucleus alpha part rostrocaudal partleft
Gigantocellular reticular nucleus alpha part ventral partleft
Gigantocellular reticular nucleus alpha part ventromedial partleft

Output to

NameSideAbbr.WeightDetails
Dorsal part of pontine central grayipsiCGPd2
Nuclei of the lateral lemniscusipsiNLL3
Medial paralemniscal nucleusipsiMPL-0.5
Dorsal periaqueductal grayipsiDPAG-0.5
Ventral periaqueductal grayipsiVPAG-0.5
Periventricular gray matteripsiPVG-0.5
Prerubral fieldipsiPR-0.5
Inferior colliculusipsiICOL3
Superior colliculusipsiSC-0.5
Superior colliculus intermediate layersipsiSCi-0.5
Superior colliculus deep layersipsiSCd-0.5
Ventral tegmental area A10ipsiVTA-0.5
Lateral tegmental nucleusipsiLTN3
Dorsal tegmental nucleus lateral partipsiDLTN3
Rostral mesopontine tegmental anesthesia areaipsiRMTGA2
Mid-level mesopontine tegmental anesthesia areaipsiMLMTGA2
Caudal mesopontine tegmental anesthesia areaipsiCMTGA2
PonsipsiP-0.5
A5 noradrenaline cells caudal partipsiA5C3
A5 noradrenaline cells rostral partipsiA5R3
A7 noradrenaline cellsipsiA74
Locus coeruleusipsiLC2
Pontomesencephalic grayipsiPoMG-0.5
Pontomesencephalotegmental complexipsiPMTC-0.5
Pontine gray properipsiPGp-0.5
Pontine reticular nucleus ventral partipsiPnV1
Ventrolateral pontine reticular formationipsivlPRF0.5
Subcoerulear areaipsiSCoe1
Cuneiforme nucleusipsiCnF1
Parabrachial nucleus dorsal partipsiPBD1
Parabrachial nucleus ventral partipsiPBV1
Medullary reticular nucleusipsiMdD3
Medullary reticular nucleus dorsal partipsiMdDd2
Parvicellular reticular nucleusipsiPCRt2
Trapezoid bodyipsitz-0.5
Subcoeruleus nucleus dorsal partipsiSubCD2
Boetzinger complexipsiBo3
Facial nucleusipsi71
Facial nucleus medial partipsi7M-0.5
Hypoglossal nucleusipsi12S4
Hypoglossal nucleus ventral partipsi12SV-0.5
Dorsal part of the hypoglossal nucleusipsi12SD-0.5
Intertrigeminal nucleusipsiI5-0.5
Juxtatrigeminal areaipsiJx5-0.5
Supratrigeminal nucleusipsiSu5-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Mesencephalic trigeminal nucleus rostral ponsipsiMe5rp1
Pontine part of the mesencephalic trigeminal nucleusipsiMe5P2
Motor trigeminal nucleusipsiMo52
Motor trigeminal nucleus dorsolateral partipsiMo5DL1
Motor trigeminal nucleus group kipsiMo5gK1
Motor trigeminal nucleus ventromedial partipsiMo5VM3
Spinal trigeminal nucleusipsiSp5nc3
Spinal trigeminal nucleus caudal part layer 5ipsiSp5CaL5-0.5
Spinal trigeminal nucleus caudal part layer 1ipsiSp5CaL1-0.5
Trigeminal interpolaris caudalis transition zone dorsal regionipsiSp5ncicd3
Trigeminal interpolaris caudalis transition zone ventral regionipsiSp5ncicv2
Nucleus of the solitary tractipsiSol0
Dorsal raphe nucleusipsiDR1
Ventral part of the central dorsal raphe nucleusipsiDRvcep1
Dorsal raphe nucleus dorsal partipsiDRD1
Dorsal raphe nucleus lateral wingipsiDRlw2
Dorsal raphe nucleus rostral partipsiDRr1
Dorsal raphe nucleus ventral partipsiDRV1
Linear nucleus of the rapheipsiLIR-0.5
Median raphe nucleusipsiMnR-0.5
Pontine raphe nucleusipsiPnR-0.5
Raphe magnus nucleusipsiRMg2
Raphe nuclei rostral partipsiRANR-0.5
Raphe obscurus nucleusipsiROb-0.5
Raphe obscurus nucleus ventral partipsiRObV3
Raphe pallidus nucleusipsiRPa1.5
Caudal ventrolateral medullaipsiCVLM3
Lateral most portion of the ventrolateral medullaipsiLMVL1
Lateral paragigantocellular nucleusipsiLPGi1.5
Juxtafacial paragigantocellular reticular nucleusipsiJPGi3
Choroidea innervating part of the superior salivatory nucleusipsiCSSN-0.5
Basal forebrainipsiBAF0
Substantia innominataipsiSI-0.5
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA1
HypothalamusipsiHYPO0.5
Lateral hypothalamic areaipsiLH1
Dorsal hypothalamic areaipsiDA1
Suprachiasmatic nucleusipsiSCh1
Lateral mammillary nucleusipsiLM-0.5
Supramammillar nucleusipsiSuM-0.5
A8 dopamine cells retrorubral groupipsiRRF-0.5
Anteroventral thalamic nucleusipsiAV0
Central medial thalamic nucleusipsiCM0
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleus caudal partipsiPC-c0
Paracentral thalamic nucleus rostral partipsiPC-r0
Parafascicular thalamic nucleus lateral partipsiPFL1
Parafascicular thalamic nucleus medial partipsiPFM1
Rhomboid thalamic nucleusipsiRh1
Mediodorsal thalamic nucleusipsiMD-0.5
Intermediodorsal thalamic nucleusipsiIMD0
Submedius thalamic nucleusipsiSub0
Paratenial thalamic nucleusipsiPT0
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus medial partipsiPVM0
Paraventricular thalamic nucleus posterior partipsiPVP0
Reuniens thalamic nucleusipsiRe0
Ventral posterior thalamic nucleus parvicellular partipsiVPPC0
Ventromedial thalamic nucleus caudal partipsiVMc1
Intralaminar nucleiipsiILN-0.5
Oval paracentral thalamic nucleusipsiOPC0
Reticular thalamic nucleusipsiRt-0.5
Zona incertaipsiZI-0.5
Nucleus of the fields of ForelipsiF-0.5
Anterior pretectal nucleusipsiAPT-0.5
Medial pretectal nucleusipsiMPT-0.5
Pineal glandipsiPi4
Dorsolateral funiculusipsidlft-2
Bed nucleus of the stria terminalisipsiBST1
Accumbens nucleusipsiAc-0.5
Caudate putamenipsiCPu1
Subthalamic nucleusipsiSTh0.5
Medial geniculate nucleusipsiMG-0.5
Spinal cordipsiMES3
Intermediolateral cell columnipsiIML3
Intermediolateral cell column pars principalisipsiIMLp3
Ventral funiculusipsivf-2
Ventrolateral funiculusipsivLF0.5
Spinal cord lamina 10ipsiMESL10-0.5
Spinal cord lamina 9ipsiMESL9-0.5
Spinal cord lamina 2ipsiMESL2-0.5
Cervical segmentsipsiCSeg-0.5
Prebrachial segmentsipsiPSeg0.5
Cervical segment 1ipsiCS12
Intermediolateral cell column C1ipsiIMLC11
Spinal cord layers C1ipsiSCLC12
Dorsal horn C1ipsiDHC12
Ventral horn C1ipsiVHC12
Cervical segment 2ipsiCS2-0.5
Intermediolateral cell column C2ipsiIMLC21
Spinal cord layers C2ipsiSCLC22
Dorsal horn C2ipsiDHC22
Ventral horn C2ipsiVHC22
Cervical segment 3ipsiCS3-0.5
Intermediolateral cell column C3ipsiIMLC31
Spinal cord layers C3ipsiSCLC32
Dorsal horn C3ipsiDHC32
Ventral horn C3ipsiVHC32
Cervical segment 4ipsiCS4-0.5
Intermediolateral cell column C4ipsiIMLC41
Spinal cord layers C4ipsiSCLC42
Dorsal horn C4ipsiDHC42
Ventral horn C4ipsiVHC42
Cervical segment 5ipsiCS53
Intermediolateral cell column C5ipsiIMLC51
Spinal cord layers C5ipsiSCLC52
Dorsal horn C5ipsiDHC52
Spinal cord layer 3 C5ipsiSCL3C5-0.5
Spinal cord layer 1 C5ipsiSCL1C5-0.5
Spinal cord layer 2 C5ipsiSCL2C5-0.5
Ventral horn C5ipsiVHC54
Cervical segment 6ipsiCS6-0.5
Intermediolateral cell column C6ipsiIMLC61
Spinal cord layers C6ipsiSCLC62
Dorsal horn C6ipsiDHC64
Ventral horn C6ipsiVHC64
Cervical segment 7ipsiCS73
Intermediolateral cell column C7ipsiIMLC71
Spinal cord layers C7ipsiSCLC72
Dorsal horn C7ipsiDHC72
Ventral horn C7ipsiVHC72
Cervical segment 8ipsiCS8-0.5
Intermediolateral cell column C8ipsiIMLC81
Spinal cord layers C8ipsiSCLC82
Dorsal horn C8ipsiDHC82
Ventral horn C8ipsiVHC82
Cervical ventral hornipsiCSegV-0.5
Thoracal segmentsipsiTSeg-0.5
Thoracal segment 1ipsiT12
Intermediolateral cell column T1ipsiIMLT11
Ventral horn T1ipsiVHT11
Thoracal segment 2ipsiT22
Intermediolateral cell column T2ipsiIMLT21
Intermediolateral cell column pars spinalis T2ipsiIMLST23
Ventral horn T2ipsiVHT21
Spinal cord layer 9 T2ipsiSCL9T22
Thoracal segment 3ipsiT32
Intermediolateral cell column T3ipsiIMLT31
Ventral horn T3ipsiVHT31
Spinal cord layer 9 T3ipsiSCL9T32
Intermediolateral cell column T4ipsiIMLT41
Ventral horn T4ipsiVHT41
Intermediolateral cell column T5ipsiIMLT51
Ventral horn T5ipsiVHT51
Intermediolateral cell column T6ipsiIMLT61
Ventral horn T6ipsiVHT61
Intermediolateral cell column T7ipsiIMLT71
Ventral horn T7ipsiVHT71
Intermediolateral cell column T8ipsiIMLT81
Ventral horn T8ipsiVHT81
Intermediolateral cell column T9ipsiIMLT91
Ventral horn T9ipsiVHT91
Intermediolateral cell column T10ipsiIMLT101
Ventral horn T10ipsiVHT101
Intermediolateral cell column T11ipsiIMLT111
Ventral horn T11ipsiVHT111
Intermediolateral cell column T12ipsiIMLT121
Ventral horn T12ipsiVHT121
Intermediolateral cell column T13ipsiIMLT131
Ventral horn T13ipsiVHT131
Thoracic intermediolateral cell columnipsiTSegiL-0.5
Lumbosacral spinal cordipsiLSSC-0.5
Lumbar segmentsipsiLSeg3
Lumbar segment 1ipsiL1-0.5
Intermediolateral cell column L1ipsiIMLL11
Spinal cord layers L1ipsiSCLL12
Dorsal horn L1ipsiDHL11
Ventral horn L1ipsiVHL11
Lumbar segment 2ipsiL23
Intermediolateral cell column L2ipsiIMLL21
Spinal cord layers L2ipsiSCLL22
Dorsal horn L2ipsiDHL21
Ventral horn L2ipsiVHL24
Lumbar segment 3ipsiL3-0.5
Dorsal root ganglion L3ipsiDRGL3-0.5
Intermediolateral cell column L3ipsiIMLL31
Spinal cord layers L3ipsiSCLL32
Dorsal horn L3ipsiDHL31
Spinal cord border between layer 10 and layer 7 L3ipsiSCLb10L7L32
Ventral horn L3ipsiVHL31
Lumbar segment 4ipsiL4-0.5
Dorsal root ganglion L4ipsiDRGL4-0.5
Intermediolateral cell column L4ipsiIMLL41
Spinal cord layers L4ipsiSCLL42
Dorsal horn L4ipsiDHL43
Spinal cord border between layer 10 and layer 7 L4ipsiSCLb10L7L42
Ventral horn L4ipsiVHL43
Lumbar segment 5ipsiL53
Dorsal root ganglion L5ipsiDRGL5-0.5
Intermediolateral cell column L5ipsiIMLL51
Spinal cord layers L5ipsiSCLL52
Dorsal horn L5ipsiDHL53
Ventral horn L5ipsiVHL53
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL53
Lumbar segment 6ipsiL6-0.5
Dorsal root ganglion L6ipsiDRGL6-0.5
Intermediolateral cell column L6ipsiIMLL61
Spinal cord layers L6ipsiSCLL62
Dorsal horn L6ipsiDHL63
Ventral horn L6ipsiVHL63
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL63
Lumbar segments dorsal hornipsiLSegDH-0.5
Intermediolateral cell column S1ipsiIMLS11
Ventral horn S1ipsiVHSa11
Intermediolateral cell column S2ipsiIMLS21
Ventral horn S2ipsiVHSa21
Intermediolateral cell column S3ipsiIMLS31
Ventral horn S3ipsiVHSa31
Intermediolateral cell column S4ipsiIMLS41
Spinal cord layers S4ipsiSCLS40.5
Ventral horn S4ipsiVHSa41
Intermediolateral cell column Co1ipsiIMLCo11
Ventral horn Co1ipsiVHCo11
Intermediolateral cell column Co2ipsiIMLCo21
Ventral horn Co2ipsiVHCo21
Intermediolateral cell column Co3ipsiIMLCo31
Ventral horn Co3ipsiVHCo31
Spinal gray matteripsiSGM2
Ventral horn of spinal cordipsiVHMES-0.5
Tracheal parasympathetic preganglionic neuronsipsiTPPN2
Prerubral fieldcontraPR-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Superior colliculus deep layerscontraSCd-0.5
Ventral tegmental area A10contraVTA-0.5
Dorsal tegmental nucleus lateral partcontraDLTN-0.5
Rostral mesopontine tegmental anesthesia areacontraRMTGA1
Mid-level mesopontine tegmental anesthesia areacontraMLMTGA1
Caudal mesopontine tegmental anesthesia areacontraCMTGA1
A5 noradrenaline cells caudal partcontraA5C2
A5 noradrenaline cells rostral partcontraA5R2
A7 noradrenaline cellscontraA72
Locus coeruleuscontraLC0.5
Pontomesencephalic graycontraPoMG-0.5
Rostroventrolateral reticular nucleuscontraRVL1.5
Ventrolateral pontine reticular formationcontravlPRF0
Gigantocellular reticular nucleuscontraGi3
Gigantocellular reticular nucleus ventral partcontraGiV3
Medullary reticular nucleuscontraMdD0.5
Medullary reticular nucleus dorsal partcontraMdDd2
Parvicellular reticular nucleuscontraPCRt1
Subcoeruleus nucleus dorsal partcontraSubCD1
Facial nucleuscontra70.5
Hypoglossal nucleuscontra12S3
Intertrigeminal nucleuscontraI5-0.5
Juxtatrigeminal areacontraJx5-0.5
Supratrigeminal nucleuscontraSu5-0.5
Mesencephalic trigeminal nucleus rostral ponscontraMe5rp1
Pontine part of the mesencephalic trigeminal nucleuscontraMe5P1
Motor trigeminal nucleuscontraMo50
Motor trigeminal nucleus ventromedial partcontraMo5VM1
Spinal trigeminal nucleuscontraSp5nc-0.5
Medial vestibular nucleuscontraMVe3
Dorsal raphe nucleus lateral wingcontraDRlw2
Linear nucleus of the raphecontraLIR-0.5
Raphe magnus nucleuscontraRMg1.5
Raphe obscurus nucleus ventral partcontraRObV3
Raphe pallidus nucleuscontraRPa1.5
Lateral most portion of the ventrolateral medullacontraLMVL1
Lateral paragigantocellular nucleuscontraLPGi1
Lateral paragigantocellular nucleus medial partcontraLPGiM3
Juxtafacial paragigantocellular reticular nucleuscontraJPGi3
Substantia innominatacontraSI-0.5
HypothalamuscontraHYPO0.5
Subthalamic nucleuscontraSTh0.5
Spinal cordcontraMES2
Intermediolateral cell columncontraIML-0.5
Intermediolateral cell column pars principaliscontraIMLp1
Ventrolateral funiculuscontravLF-2
Spinal cord lamina 9contraMESL9-0.5
Spinal cord lamina 10contraMESL10-0.5
Spinal cord lamina 2contraMESL2-0.5
Prebrachial segmentscontraPSeg0.5
Cervical segment 1contraCS13
Intermediolateral cell column C1contraIMLC10.5
Dorsal horn C1contraDHC10.5
Ventral horn C1contraVHC10.5
Cervical segment 2contraCS23
Intermediolateral cell column C2contraIMLC20.5
Dorsal horn C2contraDHC20.5
Ventral horn C2contraVHC20.5
Cervical segment 3contraCS33
Intermediolateral cell column C3contraIMLC30.5
Dorsal horn C3contraDHC30.5
Ventral horn C3contraVHC30.5
Cervical segment 4contraCS43
Intermediolateral cell column C4contraIMLC40.5
Spinal cord layers C4contraSCLC42
Dorsal horn C4contraDHC40.5
Ventral horn C4contraVHC40.5
Cervical segment 5contraCS53
Intermediolateral cell column C5contraIMLC50.5
Dorsal horn C5contraDHC50.5
Spinal cord layer 3 C5contraSCL3C5-0.5
Spinal cord layer 4 C5contraSCL4C50.5
Spinal cord layer 1 C5contraSCL1C5-0.5
Spinal cord layer 2 C5contraSCL2C5-0.5
Ventral horn C5contraVHC53
Cervical segment 6contraCS63
Intermediolateral cell column C6contraIMLC60.5
Dorsal horn C6contraDHC64
Ventral horn C6contraVHC64
Cervical segment 7contraCS73
Intermediolateral cell column C7contraIMLC70.5
Dorsal horn C7contraDHC70.5
Ventral horn C7contraVHC70.5
Cervical segment 8contraCS83
Intermediolateral cell column C8contraIMLC80.5
Dorsal horn C8contraDHC80.5
Ventral horn C8contraVHC80.5
Intermediolateral cell column T1contraIMLT10.5
Ventral horn T1contraVHT10.5
Intermediolateral cell column T2contraIMLT20.5
Ventral horn T2contraVHT20.5
Spinal cord layer 9 T2contraSCL9T21
Intermediolateral cell column T3contraIMLT30.5
Ventral horn T3contraVHT30.5
Spinal cord layer 9 T3contraSCL9T31
Intermediolateral cell column T4contraIMLT40.5
Ventral horn T4contraVHT40.5
Intermediolateral cell column T5contraIMLT50.5
Ventral horn T5contraVHT50.5
Intermediolateral cell column T6contraIMLT60.5
Ventral horn T6contraVHT60.5
Intermediolateral cell column T7contraIMLT70.5
Ventral horn T7contraVHT70.5
Intermediolateral cell column T8contraIMLT80.5
Ventral horn T8contraVHT80.5
Intermediolateral cell column T9contraIMLT90.5
Ventral horn T9contraVHT90.5
Intermediolateral cell column T10contraIMLT100.5
Ventral horn T10contraVHT100.5
Intermediolateral cell column T11contraIMLT110.5
Ventral horn T11contraVHT110.5
Intermediolateral cell column T12contraIMLT120.5
Ventral horn T12contraVHT120.5
Intermediolateral cell column T13contraIMLT130.5
Ventral horn T13contraVHT130.5
Thoracic intermediolateral cell columncontraTSegiL-0.5
Lumbar segment 1contraL1-0.5
Intermediolateral cell column L1contraIMLL10.5
Spinal cord layer 6 L1contraSCL6L13
Ventral horn L1contraVHL10.5
Spinal cord layer 7 L1contraSCL7L13
Spinal cord layer 8 L1contraSCL8L13
Lumbar segment 2contraL22
Intermediolateral cell column L2contraIMLL20.5
Spinal cord layer 6 L2contraSCL6L23
Spinal cord layer 4 L2contraSCL4L20.5
Ventral horn L2contraVHL23
Spinal cord layer 7 L2contraSCL7L23
Spinal cord layer 8 L2contraSCL8L23
Lumbar segment 3contraL3-0.5
Dorsal root ganglion L3contraDRGL3-0.5
Intermediolateral cell column L3contraIMLL30.5
Spinal cord layer 6 L3contraSCL6L33
Ventral horn L3contraVHL30.5
Spinal cord layer 7 L3contraSCL7L33
Spinal cord layer 8 L3contraSCL8L33
Lumbar segment 4contraL4-0.5
Dorsal root ganglion L4contraDRGL4-0.5
Intermediolateral cell column L4contraIMLL40.5
Dorsal horn L4contraDHL41
Spinal cord layer 6 L4contraSCL6L43
Ventral horn L4contraVHL41
Spinal cord layer 7 L4contraSCL7L43
Spinal cord layer 8 L4contraSCL8L43
Lumbar segment 5contraL53
Dorsal root ganglion L5contraDRGL5-0.5
Intermediolateral cell column L5contraIMLL50.5
Dorsal horn L5contraDHL51
Spinal cord layer 6 L5contraSCL6L53
Ventral horn L5contraVHL51
Spinal cord layer 7 L5contraSCL7L53
Spinal cord layer 8 L5contraSCL8L53
Spinal nucleus of the bulbocavernosus lumbal segment 5contraBCL53
Lumbar segment 6contraL6-0.5
Dorsal root ganglion L6contraDRGL6-0.5
Intermediolateral cell column L6contraIMLL60.5
Spinal cord layers L6contraSCLL61.5
Dorsal horn L6contraDHL61
Spinal cord layer 6 L6contraSCL6L63
Ventral horn L6contraVHL61
Spinal cord layer 7 L6contraSCL7L63
Spinal cord layer 8 L6contraSCL8L63
Spinal nucleus of the bulbocavernosus lumbal segment 6contraBCL63
Intermediolateral cell column S1contraIMLS10.5
Ventral horn S1contraVHSa10.5
Intermediolateral cell column S2contraIMLS20.5
Ventral horn S2contraVHSa20.5
Intermediolateral cell column S3contraIMLS30.5
Ventral horn S3contraVHSa30.5
Intermediolateral cell column S4contraIMLS40.5
Spinal cord layers S4contraSCLS40
Ventral horn S4contraVHSa40.5
Intermediolateral cell column Co1contraIMLCo10.5
Ventral horn Co1contraVHCo10.5
Intermediolateral cell column Co2contraIMLCo20.5
Ventral horn Co2contraVHCo20.5
Intermediolateral cell column Co3contraIMLCo30.5
Ventral horn Co3contraVHCo30.5
Spinal gray mattercontraSGM2
Ventral horn of spinal cordcontraVHMES-0.5
Pterygopalatine ganglionipsiAutoPpG-0.5
Sciatic nerveipsisci4
Sciatic nervecontrasci3
Intercapsular brown adipose tissueipsiOrgBATi-10
Adrenal glandipsiADRE3
Submandibular glandipsiOrgsSubg-10
Choroid blood vessels of the eyeipsiOrgChorBV-10
Gastrocnemius muscleipsiMuscGC3
Lumbar epaxial musclesipsiMuscLep-0.5
Tail muscleipsiMuscTail-10
Musculus abductor caudae dorsalisipsiMuscAbdCaDo-10
ClitorisipsiOrgCLi-0.5
KidneyipsiOrgsKid-0.5
SpleenipsiOrgSPL4
Submandibular glandcontraOrgsSubg-10
KidneycontraOrgsKid-0.5
SpleencontraOrgSPL-0.5
Pancreas sideipsiOrgsPancs2
Extrathoracic tracheaipsiOrgsTrasEx-10
Trachea wallipsiOrgsTrasW-0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Dorsal periaqueductal grayipsiDPAG3
Dorsal periaqueductal gray caudal partipsiDPAGC0.5
Dorsolateral periaqueductal grayipsiDLPAG3
Dorsolateral periaqueductal gray caudal partipsiPAGdlc3
Dorsolateral periaqueductal gray rostral partipsiPAGdlr3
Lateral periaqueductal grayipsiLPAG3
Middle level of the periaqueductal grayipsiPAGmi3
Periaqueductal gray caudal partipsiPAGc1
Periaqueductal gray dorsal partipsiPAGd3
Periaqueductal gray medial partipsiPAGm0.5
Ventral part of medial periaqueductal grayipsiPAGmv3
Periaqueductal gray rostral partipsiPAGR3
Ventrolateral periaqueductal grayipsiVLPAG4
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
Ventrolateral periaqueductal gray rostral partipsiPAGvlr1
Ventromedial periaqueductal grayipsiVMPAG1
Superior colliculus superficial layersipsiSCs0
Superior colliculus intermediate layersipsiSCi4
Superior colliculus deep layersipsiSCd1
Retrorubral nucleusipsiRR1
Lateral tegmental nucleusipsiLTN-0.5
Laterodorsal tegmental nucleusipsiLDTg0.5
Pedunculopontine tegmental nucleusipsiPPTg3
Rostral mesopontine tegmental anesthesia areaipsiRMTGA3
Dorsal mesopontine tegmental anesthesia areaipsiDMTGA3
Mid-level mesopontine tegmental anesthesia areaipsiMLMTGA3
Ventral mesopontine tegmental anesthesia areaipsiVeMTGA2
Caudal mesopontine tegmental anesthesia areaipsiCMTGA3
Locus coeruleusipsiLC1
Medial parapyramidal nucleusipsiPPym2
Lateral parapyramidal nucleusipsiPPyL0
Mesencephalic reticular formationipsiMRF1
Deep mesencephalic nucleusipsiDpMe3
Pontine reticular nucleusipsiPRN3
Pontine reticular nucleus oral partipsiPnO2
Ventrolateral pontine reticular formationipsivlPRF3
Pontine reticular nucleus caudal partipsiPNC2.5
Pontine reticular nucleus caudal part ventral partipsiPNCcv1.5
Cuneiforme nucleusipsiCnF3
Parabrachial nucleusipsiPB1
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB-0.5
Gigantocellular reticular nucleusipsiGi3
Gigantocellular reticular nucleus alpha part caudal partipsiGiAc3
Gigantocellular reticular nucleus alpha part medial partipsiGiAm2
Gigantocellular reticular nucleus alpha part ventral partipsiGiAv3
Gigantocellular reticular nucleus ventral partipsiGiV2
Gigantocellular reticular nucleus ventral part ventral subpartipsiGiVv3
Medial subnucleus reticularis ventralisipsiMSRV3
Medullary reticular nucleus dorsal partipsiMdDd3
Parvicellular reticular nucleusipsiPCRt0.5
Subcoeruleus nucleusipsiSubC1
Spinal trigeminal nucleus caudal part layer 4ipsiSp5CaL41
Spinal trigeminal nucleus caudal part layer 5ipsiSp5CaL53
Spinal trigeminal nucleus caudal part layer 3ipsiSp5CaL31
Spinal trigeminal nucleus caudal part layer 1ipsiSp5CaL10.5
Spinal trigeminal nucleus caudal part layer 2ipsiSp5CaL20.5
Trigeminal interpolaris caudalis transition zone dorsal regionipsiSp5ncicd2
Trigeminal interpolaris caudalis transition zone ventral regionipsiSp5ncicv2
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus rostral partipsiDRr2
Median raphe nucleusipsiMnR1
Paramedian raphe nucleusipsiPMnR1
Raphe magnus nucleusipsiRMg-0.5
Raphe magnus nucleus caudal partipsiRMgc2
Raphe obscurus nucleus rostroventral partipsiRObrv2
B9 serotonin cellsipsiB90.5
Caudal ventrolateral medullaipsiCVLM3
Rostral ventrolateral medullaipsiRVLM-0.5
Inferior oliveipsiIO3
Lateral paragigantocellular nucleusipsiLPGi1
Retrotrapezoid nucleusipsiRTN2
Diagonal band of BrocaipsiDBB0.5
Substantia innominataipsiSI0.5
Lateral preoptic areaipsiLPO0.5
Medial preoptic areaipsiMPA0.5
Medial preoptic nucleusipsiMPO0.5
Median preoptic nucleusipsiMnPO0.5
Dorsomedial hypothalamic nucleusipsiDMHy0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR1
Lateral zoneipsiLHA-0.5
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area dorsal partipsiLHd0.5
Lateral hypothalamic area perifornical partipsiPFx3
Lateral hypothalamic area ventral partipsiLHAvp2
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc-0.5
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Posterior hypothalamic areaipsiPHA-0.5
Posterior hypothalamic nucleus caudal partipsiPHCa1.5
Posterior hypothalamic nucleus rostral partipsiPHRo1
Periventricular zoneipsiPVZ0.5
Arcuate nucleusipsiArc1
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR0.5
Anterior hypothalamic area [Regio rostralis]ipsiAHARR1
Medial part of the caudal perifornical areaipsiPeFCM1
Lateral part of the caudal perifornical areaipsiPeFCL1
Nucleus of the fields of ForelipsiF1
Zona incerta ventral part medial partipsiZIvm1
Tuber cinereum areaipsiTC-0.5
Lateral habenular nucleusipsiLHb0.5
Anterior pretectal nucleusipsiAPT1
Anterior pretectal nucleus caudal partipsiAPTca2
Anterior pretectal nucleus rostral partipsiAPTro2
Rostrodorsal anterior pretectal nucleusipsiRDAPT2
Rostroventral anterior pretectal nucleusipsiRVAPT3
Caudoventral anterior pretectal nucleusipsiCVAPT3
Bed nucleus of the stria terminalis medial divisionipsiBSTM0.5
Central amygdaloid nucleusipsiCe0.5
Central amygdaloid nucleus lateral divisionipsiCeL0.5
Central amygdaloid nucleus medial division rostral partipsiCeMR1
Accumbens nucleusipsiAc0.5
Insular cortexipsiICX0.5
Middle part of the caudal one-third of the dysgranular insular cortexipsiDIvCotMi3
Caudal part of the caudal one-third of the dysgranular insular cortexipsiDIvCotC3
Rostral two-thirds of the dysgranular insular cortexipsiRDIrtt1
Caudal part of the caudal one-third of the granular insular cortexipsiGICotC3
Middle part of the caudal one-third of the granular insular cortexipsiGICotM3
Rostral two-thirds of the granular insular cortexipsiRttGI1
Perirhinal cortexipsiA350.5
Prefrontal cortexipsiPFC0.5
Medial prefrontal cortexipsimPFC3
Cervical segment 6ipsiCS60.5
Cervical segment 7ipsiCS70.5
Cervical segment 8ipsiCS80.5
Dorsal horn L1ipsiDHL1-0.5
Dorsal horn L2ipsiDHL2-0.5
Dorsal root ganglion L3ipsiDRGL3-10
Dorsal horn L3ipsiDHL3-0.5
Dorsal root ganglion L4ipsiDRGL4-10
Dorsal horn L4ipsiDHL4-0.5
Dorsal root ganglion L5ipsiDRGL5-10
Dorsal horn L5ipsiDHL5-0.5
Lumbar segment 6ipsiL60.5
Dorsal root ganglion L6ipsiDRGL6-10
Dorsal horn L6ipsiDHL6-0.5
Sacral segment 1ipsiSa10.5
Sacral segment 2ipsiSa20.5
Periaqueductal graycontraPAG1
Dorsal periaqueductal graycontraDPAG3
Dorsal periaqueductal gray caudal partcontraDPAGC0.5
Dorsolateral periaqueductal gray caudal partcontraPAGdlc1
Dorsolateral periaqueductal gray rostral partcontraPAGdlr1
Lateral periaqueductal graycontraLPAG3
Ventrolateral periaqueductal graycontraVLPAG3
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0.5
Superior colliculus superficial layerscontraSCs0
Superior colliculus intermediate layerscontraSCi2
Superior colliculus deep layerscontraSCd1
Lateral tegmental nucleuscontraLTN-0.5
Pedunculopontine tegmental nucleuscontraPPTg3
Medial aspect of the rostroventrolateral reticular nucleuscontraRVLm-0.5
Mesencephalic reticular formationcontraMRF0.5
Pontine reticular nucleuscontraPRN3
Ventrolateral pontine reticular formationcontravlPRF1
Pontine reticular nucleus caudal partcontraPNC2.5
Gigantocellular reticular nucleuscontraGi2
Medullary reticular nucleus dorsal partcontraMdDd3
Paramedian raphe nucleuscontraPMnR1
Dorsomedial hypothalamic nucleuscontraDMHy0
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic areacontraLH-0.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]contraDMrhc-0.5
Dorsal hypothalamic areacontraDA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Posterior hypothalamic areacontraPHA-0.5
Posterior hypothalamic nucleus caudal partcontraPHCa0.5
Posterior hypothalamic nucleus rostral partcontraPHRo0.5
Periventricular zonecontraPVZ-0.5
Anterior hypothalamic area [Regio rostralis]contraAHARR-0.5
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Tuber cinereum areacontraTC-0.5
Rostral two-thirds of the dysgranular insular cortexcontraRDIrtt3
Rostral two-thirds of the granular insular cortexcontraRttGI3
Medial prefrontal cortexcontramPFC3
Cervical segment 6contraCS60.5
Cervical segment 7contraCS70.5
Dorsal root ganglion L3contraDRGL3-10
Dorsal root ganglion L4contraDRGL4-10
Dorsal root ganglion L5contraDRGL5-10
Lumbar segment 6contraL60.5
Dorsal root ganglion L6contraDRGL6-10
Sacral segment 1contraSa10.5
Sacral segment 2contraSa20.5
TongueipsiOrgOCT-10
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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