University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Lateral septal nucleus rostral part left


Abbreviation
LSr
Color       
Superior regionsLateral septal nucleus

SynonymsAbbr.Language
Lateral septal nucleus rostral partLSrEng
Lateral septum rostrally  

SubregionsSide
Lateral septal nucleus rostral part dorsolateral zoneleft
Lateral septal nucleus rostral part medial zoneleft
Lateral septal nucleus rostral part ventrolateral zoneleft
Lateral septal nucleus ventrally in rostral partleft
Lateral septal nucleus very rostral tipleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal gray rostrolateral partipsiPAGRL-2
Preoptic regionipsiPREO-0.5
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA3
Medial preoptic nucleusipsiMPO2
Dorsal tenia tecta layer 4ipsiDTT41
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral hypothalamic areaipsiLH3
Subparaventricular zoneipsiSuPZ-0.5
Ventromedial hypothalamic nucleus anterior ventral partipsiVMHav-0.5
Arcuate nucleusipsiArc-0.5
Suprachiasmatic nucleus dorsal divisionipsiSChd1
Suprachiasmatic nucleus lateral divisionipsiSChl1
Perifornical nucleusipsiPeF2
Amygdaloid complexipsiAC1
Bed nucleus of the stria terminalisipsiBST-0.5
Dorsal accumbensipsiAcbD-0.5
HippocampusipsiHIPP1
Infralimbic cortexipsiIL1
Precommissural fornixipsipcf1
Interpeduncular nucleusipsiIP-0.5
Olfactory peduncleipsiOLP1
Septofimbrial nucleusipsiSFi1
Stria terminalisipsist1

Input from

NameSideAbbr.WeightDetails
Periventricular gray matteripsiPVG1
Interfascicular nucleusipsiIF-0.5
Interfascicular nucleus caudal partipsiIFc3
Dorsal tegmental nucleusipsiDTg-0.5
Dorsal tegmental nucleus lateral partipsiDLTN1
Locus coeruleusipsiLC-0.5
Nucleus incertus pars compactaipsiNIc1
Parabrachial nucleusipsiPB3
Koelliker Fuse nucleusipsiKF-0.5
Parabrachial nucleus dorsal partipsiPBD-0.5
Parabrachial nucleus ventral partipsiPBV-0.5
Lateral reticular nucleusipsiLRt-0.5
Nucleus of the solitary tractipsiSol-0.5
Dorsal motor nucleus of vagusipsi10-0.5
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus caudal partipsiDRC2
Medial raphe nucleusipsiMeR-0.5
Pontine raphe nucleusipsiPnR-0.5
Substantia innominataipsiSI-0.5
Lateral preoptic areaipsiLPO-0.5
Medial preoptic nucleusipsiMPO1
HypothalamusipsiHYPO2
Area periventricularis hypothalamica dorsalisipsiAPD-0.5
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx2
Lateral hypothalamic area ventral partipsiLHAvp-0.5
Anterior hypothalamic nucleus ventromedial partipsiAHAvm2
Anterior hypothalamic nucleusipsiAHn3
Anterior hypothalamic nucleus rostral zoneipsiAHnR2
Posterior hypothalamic areaipsiPHA1
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]ipsiPaV1
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag-0.5
Subparaventricular zone of the hypothalamus perisuprachiasmatic regionipsiSBPVps3
Suprachiasmatic nucleus dorsomedial partipsiSCnDM1
Suprachiasmatic nucleus ventrolateral partipsiSCnVL2
Supramammillary commissureipsismaco-2
Retrochiasmatic areaipsiRCh2
Anterodorsal thalamic nucleusipsiAD2
Anteroventral thalamic nucleusipsiAV2
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV3
Reuniens thalamic nucleusipsiRe1
Nucleus reuniens rostral division dorsal partipsiRERd3
Ventrobasal complexipsiVB1.5
Forel field H2ipsiFFH21
Lateral lemniscusipsill-0.5
Amygdaloid complexipsiAC-0.5
Posterior basolateral nucleusipsiBLP2
Posterior basomedial nucleusipsiBMP1
Bed nucleus of the stria terminalisipsiBST-0.5
Medial amygdaloid nucleusipsiMe1
Dorsomedial accumbens nucleusipsiAcDM-0.5
Cerebral cortexipsiCEC-0.5
HippocampusipsiHIPP3
Ammon hornipsiAmH2
Field CA1 of hippocampusipsiCA13
SubiculumipsiS-0.5
Subiculum dorsal partipsiSd2
Subiculum ventral partipsiSv3
Septohippocampal nucleusipsiSHi2
Presubiculum dorsal partipsiPrD2.5
Anterodorsal part of the temporal association area 2ipsiTe2AD-0.5
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus ventral partipsiLSV1
Locus coeruleuscontraLC-0.5
Parabrachial nucleus dorsal partcontraPBD-0.5
Parabrachial nucleus ventral partcontraPBV-0.5
Posterior hypothalamic areacontraPHA1
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]contraPaV1
Paraventricular hypothalamic nucleus magnocellular divisioncontraPaMag-0.5
Ventrobasal complexcontraVB0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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