University of Rostock

Department of Anatomy

Neuroscience Group

 Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Medial preoptic nucleus left


Abbreviation
MPO
Color       
Superior regionsPreoptic nucleus

SynonymsAbbr.Language
Preoptic nucleus medial  
Nucleus preopticus medialis  
Medial preoptic nucleusMPOEng
Nucleus praeopticus medialisMPNLat

SubregionsSide
Medial preoptic nucleus central partleft
Medial preoptic nucleus dorsal partleft
Medial preoptic nucleus lateral partleft
Medial preoptic nucleus medial partleft
Medial preoptic nucleus rostral partleft
Medial preoptic nucleus caudal poleleft
Medial preoptic nucleus near the paraventricular hypothalamic nucleusleft
Medial preoptic nucleus sexuall dimorphism partleft
Medial preoptic nucleus lateroventral aspectleft
Medial preoptic nucleus periventricular regionleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Central grey periaqueductalipsiCGPAG-0.5
Central gray mesencephalic partipsiCGM3
Central gray mesencephalic part ventrolateral regionipsiCGMvL-0.5
Central gray mesencephalic part lateral borderipsiCGMLb-0.5
Anteroposterior extension of the central gray mesencephalic partipsiCGMap3
Between anterior end of dorsal raphe and posterior ventral tegmental nucleus of the central gray mesencephalic partipsiCGMdrvtg3
Fasciculus retroflexusipsifr-0.5
Nucleus of DarkschewitschipsiDk2
Oculomotor nucleusipsi32
Periaqueductal grayipsiPAG4
Dorsolateral periaqueductal grayipsiDLPAG1
Dorsomedial periaqueductal grayipsiDMPAG3
Lateral periaqueductal grayipsiLPAG3
Periaqueductal gray dorsal partipsiPAGd3
Periaqueductal gray medial partipsiPAGm-0.5
Ventral periaqueductal grayipsiVPAG3
Ventrolateral periaqueductal grayipsiVLPAG3
Ventromedial periaqueductal grayipsiVMPAG3
Periventricular gray matteripsiPVG1
Red nucleusipsiR2
Substantia nigra A9ipsiSN1
Ventral tegmental area A10ipsiVTA3
Interfascicular nucleusipsiIF-0.5
Peripeduncular nucleusipsiPP1
Laterodorsal tegmental nucleusipsiLDTg2
Ventral tegmental nucleusipsiVTg1
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg1
Interstitial nucleus of CajalipsiInC2
A5 noradrenaline cellsipsiA53
Barringtons nucleusipsiBar3
Locus coeruleusipsiLC1
Locus coeruleus ventral partipsiLCv1
Pericoerulear regionipsiPCR1
Nucleus subincertusipsiNSI3
Reticulotegmental nucleusipsiRETn1
Reticular systemipsiRF0
Deep mesencephalic nucleusipsiDpMe-0.5
Deep mesencephalic nucleus dorsal partipsiDpMeD2
Pontine reticular nucleusipsiPRN-0.5
Pontine reticular nucleus oral partipsiPnO1
Cuneiforme nucleusipsiCnF1
Lateral parabrachial nucleusipsiLPB1
Lateral parabrachial nucleus dorsal partipsiLPBD1
Lateral parabrachial nucleus lateral partipsiLPBL1
Lateral parabrachial nucleus central lateral partipsiLPBCL1
Gigantocellular reticular nucleusipsiGi0.5
Gigantocellular reticular nucleus alpha partipsiGiA0.5
Parvicellular reticular nucleusipsiPCRt1
Subcoeruleus nucleusipsiSubC1
Mesencephalic trigeminal nucleusipsiMe50.5
Mesencephalic trigeminal nucleus medial partipsiperiMe51
Vestibular nucleiipsiVnc1
Nucleus of the solitary tractipsiSol1
Dorsal motor nucleus of vagusipsi100.5
Dorsal raphe nucleusipsiDR1.5
Dorsal raphe nucleus dorsal coreipsiDRDc0.5
Dorsal raphe nucleus lateral wingipsiDRlw2.5
Dorsal raphe nucleus rostral partipsiDRr2.5
Dorsal raphe nucleus ventral partipsiDRV0.5
Dorsal raphe nucleus ventrolateral partipsiDRVL0.5
Rostral linear nucleus of the rapheipsiRLi-0.5
Median raphe nucleusipsiMnR1
Central raphe nucleus dorsal partipsiCRNdp2.5
Central raphe nucleus ventral partipsiCRNvp2
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus caudal partipsiRMgc0.5
Raphe magnus nucleus dorsal partipsiDRMg2
Raphe magnus nucleus rostral partipsiRMgR0.5
Raphe nuclei rostral partipsiRANR-0.5
Raphe obscurus nucleusipsiROb1
Raphe pallidus nucleusipsiRPa3
Rostral ventrolateral medullaipsiRVLM3
Paragigantocellular reticular nucleusipsiPGi1
Inferior salivatory nucleusipsiIS2
Superior salivatory nucleusipsiSuS4
Ventromedial medulla oblongataipsiMeObvm2
Median eminenceipsiME3
Median eminence external layeripsiMEeL1
Diagonal band of BrocaipsiDBB1
Medial septal nucleusipsiMS3
Substantia innominataipsiSI1
Medial tuberal nucleusipsiMTuN3
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA3
Lateral preoptic nucleusipsiLPN1
Magnocellular preoptic nucleusipsiMCPO-0.5
Medial preoptic nucleusipsiMPO1
Medial preoptic nucleus lateral partipsiMPOL-2
Median preoptic nucleusipsiMnPO3
Ventrolateral preoptic nucleusipsiVLPO2
Extended ventrolateral preoptic nucleusipsieVLPO1
Core of the ventrolateral preoptic areaipsiVLPOco1
Preoptic region rostral partipsiPREOr3
Ventral tuberomammillary nucleusipsiVTM3
Vascular organ of the lamina terminalisipsiVOLT3
Dorsomedial hypothalamic nucleusipsiDMHy3
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx-0.5
Lateral hypothalamic area posterior partipsiLHAp1
Lateral hypothalamic nucleusipsiLHN1
Tuberal region of lateral hypothalamusipsiTuLH1
Lateral zone tuberal levelipsiLHt1
Tuberal nucleusipsiTU3
Mediobasal hypothalamusipsiMeHypo2
Medial division of the hypothalamusipsiMdH4
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic area posterior partipsiAHAP0.5
Anterior hypothalamic nucleusipsiAHn2
Anterior part of the anterior hypothalamic nucleusipsiAHna1
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus anterior partipsiDMA2
Dorsomedial hypothalamic nucleus ventral partipsiDMV0.5
Posterior hypothalamic areaipsiPHA2
Posterior hypothalamic nucleusipsiPH1
Tuberal area ventral to the fornixipsiTAvf1
Ventromedial hypothalamic nucleusipsiVMH4
Ventromedial hypothalamic nucleus central partipsiVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1
Ventromedial hypothalamic nucleus medial partipsiVMHM0
Ventromedial hypothalamic nucleus rostral partipsiVMHR0
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Mediobasal hypothalamus anterior partipsiMeHypoAnt3
Mediobasal hypothalamus posterior partipsiMeHypoP4
Arcuate nucleusipsiArc4
Arcuate nucleus anterior tipipsiArcAt-0.5
Arcuate nucleus lateral partipsiArcL-0.5
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR3
Paraventricular nucleus of the hypothalamus magnocellular division medial magnocellular partipsiPaAMm3
Paraventricular hypothalamic nucleus lateral magnocellular part [Periventricular zone anterior region]ipsiPaLM3
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP3
Paraventricular hypothalamic nucleus dorsal partipsiPaD1
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo0.5
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]ipsiPaV1
Paraventricular hypothalamic nucleusipsiPa4
Paraventricular hypothalamic nucleus dorsomedial capipsiPadmc3
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag3
Paraventricular hypothalamic nucleus magnocellular division between PaLM and PaAMmipsiPaMagb2.5
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo2
Paraventricular hypothalamic nucleus anterior parvicellular subdivisionipsiaPavPo2
Paraventricular hypothalamic nucleus parvocellular division posterior partipsiPavPoP3
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
Paraventricular nucleus anterior partipsiPaan2
Paraventricular nucleus dorsal edgeipsiPaDoE0.5
Paraventricular nucleus dorsal most portionipsiPaDom2
Paraventricular nucleus medial part at mid paraventricular hypothalamic nucleus levelipsiPamemi0.5
Paraventricular nucleus medial part at posterior paraventricular hypothalamic nucleus levelipsiPamepo0.5
Peri-paraventricular hypothalamic nucleusipsiPPa2
Ventral perinuclear paraventricular hypothalamic areaipsiPPaV3
Periventricular hypothalamic nucleusipsiPe1
Posterior periventricular nucleusipsiPeP3
Suprachiasmatic nucleusipsiSCh3
Supraoptic nucleus [Supraoptic region]ipsiSO2
Supraoptic nucleus anterior divisionipsiSOA2
Supraoptic nucleus posterior partipsiSOP2
Ventral hypothalamic regionipsiVHR3
Lateral mammillary nucleusipsiLM1
Mammillotegmental tractipsimtg-0.5
Medial mammillary nucleusipsiMMn0
Premammillary nucleus dorsal partipsiPMD0.5
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleusipsiSuM3
A8 dopamine cells retrorubral groupipsiRRF3
Retrochiasmatic area caudal partipsiRChC-0.5
Dorsochiasmatic areaipsiDRCh3
Central medial thalamic nucleusipsiCM-0.5
Mediodorsal thalamic nucleusipsiMD1
Intermediodorsal thalamic nucleusipsiIMD-0.5
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV2
Reuniens thalamic nucleusipsiRe2
Reuniens thalamic nucleus caudomedial divisionipsiRecm2
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl3
Subfornical organipsiSFO-0.5
Intralaminar nucleiipsiILN1
Posterior groupipsiPTG1
Subparafascicular thalamic nucleus parvicellular partipsiSPFp2
Zona incertaipsiZI3
Zona incerta medial tipipsiZImt2
Lateral habenular nucleusipsiLHb1
Pretectal regionipsiPRT1
Pineal glandipsiPi2
Pituitary glandipsiPIT-0.5
Intermediate lobe of pituitaryipsiIPit1
Posterior lobe of pituitaryipsiPPit1
Superior cerebral peduncleipsisucp-0.5
Medial forebrain bundle at the level of the lateral preoptic areraipsimfbLpa-2
Medial forebrain bundle at the level of the anterior hypothalamic nucleusipsimfbahn0
Medial forebrain bundle at the level of the lateral hypothalamusipsimfbLH-2
Medial forebrain bundle at the level of the posterior hypothalamic nucleusipsimfbPH-2
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV-0.5
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV1
Bed nucleus of the stria terminalis medial division posterior partipsiBSTMP2
Bed nucleus of the stria terminalis medial division posterointermediate partipsiBSTMPI-0.5
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr3
Central extended amygdala groupipsiCEXA-0.5
Medial division of the sublenticular extended amygdalaipsiSLEAm-0.5
Medial amygdaloid nucleusipsiMe2
Medial amygdaloid nucleus caudal partipsiMeC3
Medial amygdaloid nucleus posterodorsal partipsiMePD2
Amygdalohippocampal areaipsiAHi1
Ventral pallidumipsiVP1
Accumbens nucleusipsiAc1
Caudate putamenipsiCPu1
Subthalamic nucleusipsiSTh1
HippocampusipsiHIPP1
Dentate gyrusipsiDG2
Field CA1 of hippocampusipsiCA12
Field CA3 of hippocampusipsiCA32
SubiculumipsiS1
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL1
Infralimbic cortex deep layersipsiILDL3
Lateral agranular prefrontal cortexipsiAGl0.5
Medial prefrontal cortexipsimPFC0.5
Precommissural nucleusipsiPrC1
Interpeduncular nucleusipsiIP1
Interpeduncular nucleus rostral subnucleus central partipsiIPRce1
Lateral septal nucleusipsiLS2
Lateral septal nucleus dorsal partipsiLSD3
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus rostral partipsiLSr1
Lateral septal nucleus ventral partipsiLSV4
Septohypothalamic nucleusipsiSHy4
Lumbar segment 6ipsiL62
Sacral segment 1ipsiSa12
Central gray mesencephalic partcontraCGM-0.5
Anteroposterior extension of the central gray mesencephalic partcontraCGMap-0.5
Between anterior end of dorsal raphe and posterior ventral tegmental nucleus of the central gray mesencephalic partcontraCGMdrvtg-0.5
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Periaqueductal graycontraPAG1
Dorsolateral periaqueductal graycontraDLPAG1
Dorsomedial periaqueductal graycontraDMPAG1
Lateral periaqueductal graycontraLPAG1
Periaqueductal gray dorsal partcontraPAGd1
Ventral periaqueductal graycontraVPAG1
Ventrolateral periaqueductal graycontraVLPAG2
Ventromedial periaqueductal graycontraVMPAG1
Periventricular gray mattercontraPVG-0.5
Red nucleuscontraR-0.5
Substantia nigra A9contraSN-0.5
Peripeduncular nucleuscontraPP-0.5
A5 noradrenaline cellscontraA52
Deep mesencephalic nucleus dorsal partcontraDpMeD1
Lateral parabrachial nucleus dorsal partcontraLPBD-0.5
Lateral parabrachial nucleus lateral partcontraLPBL-0.5
Lateral parabrachial nucleus central lateral partcontraLPBCL-0.5
Inferior salivatory nucleuscontraIS1
Superior salivatory nucleuscontraSuS2
Lateral preoptic areacontraLPO-0.5
Medial preoptic nucleuscontraMPO-0.5
Ventromedial preoptic nucleuscontraVMPO-0.5
Preoptic region rostral partcontraPREOr-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Anterior hypothalamic nucleuscontraAHn-0.5
Dorsomedial hypothalamic nucleus anterior partcontraDMA-0.5
Dorsomedial hypothalamic nucleus ventral partcontraDMV-0.5
Posterior hypothalamic nucleuscontraPH-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleuscontraPa1
Paraventricular hypothalamic nucleus parvocellular divisioncontraPavPo-0.5
Paraventricular nucleus medial partcontraPame0.5
Periventricular hypothalamic nucleuscontraPe-0.5
Lateral mammillary nucleuscontraLM-0.5
Premammillary nucleus ventral partcontraPMV-0.5
A8 dopamine cells retrorubral groupcontraRRF-0.5
Dorsochiasmatic areacontraDRCh2
Parafascicular thalamic nucleuscontraPF-0.5
Paratenial thalamic nucleuscontraPT-0.5
Paraventricular thalamic nucleuscontraPV-0.5
Posterior groupcontraPTG-0.5
Lateral habenular nucleuscontraLHb-0.5
Bed nucleus of the stria terminaliscontraBST-0.5
Accumbens nucleuscontraAc-0.5
Caudate putamencontraCPu-0.5
Subthalamic nucleuscontraSTh-0.5
Infralimbic cortexcontraIL1
Lateral septal nucleuscontraLS-0.5
Septohypothalamic nucleuscontraSHy-0.5
Stellate ganglionipsiAutoSteG3
Ventral stomach wallipsiOrgsStomVWS-0.5
Distal colonipsiOrgsColonDi-10
Ventral surface of the colon descendingipsiOrgsColonDV-10
Lateral surface of the colon descendingipsiOrgsColonDL-10
Genioglossus muscleipsiMuscGenioG-0.5
Lumbar epaxial musclesipsiMuscLep-0.5
Inferior pharyngeal constrictor muscleipsiMusciPC-0.5
Posterior cricoarytenoid muscleipsiMuscPCA-0.5
Musculus abductor caudae dorsalisipsiMuscAbdCaDo-10
Femoral bone marrowipsiOrgSkFemM2
Intraperitoneal cavityipsiOrgiPTC1
ClitorisipsiOrgCLi-10
VaginaipsiOrgVag-10
ProstateipsiOrgProst-0.5

Input from

NameSideAbbr.WeightDetails
Central gray dorsal partipsiCGD-0.5
Central gray lateral partipsiCGL-0.5
Central gray ventral areaipsiCGva-0.5
Central gray mesencephalic partipsiCGM0
Central gray pons partipsiCGP0.5
Medial longitudinal fasciculusipsimlf0
Medial paralemniscal nucleusipsiMPL0
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi30.5
Periaqueductal grayipsiPAG2.5
Dorsal periaqueductal grayipsiDPAG0.5
Dorsal periaqueductal gray caudal partipsiDPAGC0.5
Dorsolateral periaqueductal grayipsiDLPAG0.5
Dorsomedial periaqueductal grayipsiDMPAG2.5
Lateral periaqueductal grayipsiLPAG2.5
Periaqueductal gray dorsal partipsiPAGd2.5
Periaqueductal gray rostrocaudal extentipsiPAGroe1
Ventrolateral periaqueductal grayipsiVLPAG2.5
Ventral peripeduncular periaqueductal grayipsiVPPAG-0.5
Periventricular gray matteripsiPVG2
Red nucleusipsiR0
Central tegmental fieldipsiTGAC-0.5
Substantia nigra A9ipsiSN0
Ventral tegmental area A10ipsiVTA-0.5
Caudal linear nucleus of the rapheipsiCLi0.5
Peripeduncular nucleusipsiPP2
Laterodorsal tegmental nucleusipsiLDTg-0.5
Laterodorsal tegmental nucleus ventral partipsiLDTgV1
Laterodorsal tegmental nucleus rostral partipsiLDTgR1
Ventral tegmental nucleusipsiVTg0
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg1
Edinger Westphal nucleusipsiEW-0.5
Interstitial nucleus of CajalipsiInC0
CerebellumipsiCERE1
Superior cerebellar peduncleipsisucep-2
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC0.5
Locus coeruleus rostral partipsiLCRo1
Locus coeruleus ventral partipsiLCv1
Nucleus incertus pars compactaipsiNIc1
Reticulotegmental nucleusipsiRETn0
Cuneiforme nucleusipsiCnF1
Parabrachial nucleusipsiPB2
Lateral parabrachial nucleusipsiLPB2
Lateral parabrachial nucleus central partipsiLPBC0.5
Lateral parabrachial nucleus dorsal partipsiLPBD3
Lateral parabrachial nucleus lateral partipsiLPBL3
Lateral parabrachial nucleus superior partipsiLPBS0.5
Rostral parts of the lateral parabrachial nucleus ventral partipsiLPBVR1.5
Parabrachial nucleus dorsal partipsiPBD-0.5
Parabrachial nucleus medialipsiPBnMe0
Parabrachial nucleus rostral partipsiPBro-0.5
Gigantocellular reticular nucleusipsiGi1
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus dorsal partipsiMdDd2
C3 adrenaline cellsipsiC3-10
Vestibular nucleiipsiVnc0
Nucleus of the solitary tractipsiSol1
11 beta hydroxysteroiddehydrogenase type-2 cellsipsiSolHSD20
Nucleus of the solitary tract caudal partipsiSolca1
Caudal nucleus of the solitary tract medial partipsiSolcame1
Nucleus of the solitary tract medial partipsiSolM0.5
Nucleus of the solitary tract rostrolateral partipsiSolRL-0.5
Caudal medioventral nucleus of the solitary tractipsiCMVSol-0.5
Dorsal motor nucleus of vagusipsi100
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC0.5
Dorsal raphe nucleus rostral partipsiDRr1
Dorsal raphe nucleus ventral partipsiDRV1
Median raphe nucleusipsiMnR3
Pontine raphe nucleusipsiPnR-0.5
Raphe magnus nucleusipsiRMg3
Raphe magnus nucleus lateral partipsiRMgL-0.5
Raphe obscurus nucleusipsiROb3
Raphe pallidus nucleusipsiRPa0.5
B9 serotonin cellsipsiB93
Ventral lateral medulla oblongataipsiMVL0.5
A1 noradrenergic cellsipsiA1-0.5
Diagonal band of BrocaipsiDBB0
Medial septal nucleusipsiMS1
Substantia innominataipsiSI0.5
Lateral preoptic areaipsiLPO0.5
Medial preoptic areaipsiMPA1
Caudal pole of medial preoptic areaipsiMPAc3
Anterodorsal preoptic nucleusipsiADP1
Lateral preoptic nucleusipsiLPN1
Magnocellular preoptic nucleusipsiMCPO-3
Medial preoptic nucleusipsiMPO1
Medial preoptic nucleus lateral partipsiMPOL-2
Median preoptic nucleusipsiMnPO1
Dorsal tuberomammillary nucleusipsiDTM1
Dorsomedial hypothalamic nucleusipsiDMHy1.5
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx3
Lateroanterior hypothalamic nucleusipsiLAH0.5
Striohypothalamic nucleusipsiStHy1.5
Tuberal nucleusipsiTU0.5
Anterior hypothalamic areaipsiAHA1
Anterior hypothalamic area central partipsiAHAC1
Anterior hypothalamic area posterior partipsiAHAP0.5
Anterior hypothalamic nucleus ventromedial partipsiAHAvm1
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe3
Anterior hypothalamic area immediately caudal to the suprachiasmatic areaipsiAHAcSCh0
Anterior hypothalamic nucleusipsiAHn1
Anterior part of the anterior hypothalamic nucleusipsiAHna1
Anteroventral preoptic nucleusipsiAnV2
Dorsal hypothalamic areaipsiDA0.5
Dorsomedial hypothalamic areaipsiDMHyA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus anterior partipsiDMA0.5
Dorsomedial hypothalamic nucleus dorsal partipsiDMD1.5
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Dorsomedial hypothalamic nucleus ventral partipsiDMV1
Dorsomedial nucleus posterior partipsiDMHp0.5
Parastriatal nucleusipsiPS1
Posterior hypothalamic areaipsiPHA3
Midlateral posterior hypothalamic areaipsiPHAmL-0.5
Posterior hypothalamic nucleusipsiPH1.5
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo0
Posterodorsal preoptic nucleus 2ipsiPD2-0.5
Subparaventricular zoneipsiSuPZ1.5
Lateral part of ventral subparaventricular zoneipsiSuPZvL1
Subparaventricular zone ventromedial partipsiSuPZvm3
Subparaventricular zone dorsomedial partipsiSuPZdm0.5
Subparaventricular zone dorsolateral partipsiSuPZdL2
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus anterior partipsiVMHA0.5
Ventromedial hypothalamic nucleus central partipsiVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1.5
Ventromedial hypothalamic nucleus posterior partipsiVMHP3
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL4
Ventromedial hypothalamic nucleus ventromedial partipsiVMHvm1.5
Periventricular zoneipsiPVZ-0.5
Arcuate nucleusipsiArc4
Arcuate nucleus dorsal partipsiArcD1.5
Arcuate nucleus lateral partipsiArcL1.5
Arcuate hypothalamic nucleus lateroposterior partipsiArcLP2
Arcuate nucleus medial partipsiArcM2
Arcuate hypothalamic nucleus medial posterior partipsiArcMP2
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP2
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Region closely adjoining the paraventricular hypothalamic nucleusipsiPeriVAca-0.5
Periventricular hypothalamic nucleusipsiPe2
Preoptic periventricular nucleusipsiPePO0
Subparaventricular zone of the hypothalamusipsiSPa1
Subparaventricular zone of the hypothalamus perisuprachiasmatic regionipsiSBPVps2
Suprachiasmatic nucleusipsiSCh1
Suprachiasmatic nucleus central divisionipsiSChc0.5
Suprachiasmatic nucleus dorsal divisionipsiSChd0
Suprachiasmatic nucleus dorsolateral partipsiSChDL1
Suprachiasmatic nucleus dorsomedial partipsiSCnDM2
Suprachiasmatic nucleus ventrolateral partipsiSCnVL1
Suprachiasmatic nucleus ventromedial partipsiSChVM1
Region dorsal to suprachiasmatic nucleusipsiSChDT0
Suprachiasmatic preoptic nucleusipsiPSCh0
Supraoptic nucleus [Supraoptic region]ipsiSO-3
Lateral mammillary nucleusipsiLM0
Medial mammillary nucleusipsiMMn0
Premammillary nucleusipsiPMAN-0.5
Premammillary nucleus dorsal partipsiPMD1
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleusipsiSuM2
Supramammillar nucleus medial partipsiSuMM0.5
Perifornical nucleusipsiPeF-0.5
Perifornical nucleus at the level of the paraventricular hypothalamic nucleus anterior parvicellular partipsiPeFLPaAP-0.5
Perifornical nucleus caudal to the paraventricular hypothalamic nucleus anterior parvicellular partipsiPeFCPaAP-0.5
Retrochiasmatic areaipsiRCh1.5
Retrochiasmatic area lateral partipsiRChL1
Retrochiasmatic area immediately caudal to the suprarchiasmatic areaipsiRChcSCh0
Anterior group of the dorsal thalamusipsiATN2.5
Parafascicular thalamic nucleusipsiPF0
Mediodorsal thalamic nucleusipsiMD2.5
Paratenial thalamic nucleusipsiPT0
Paraventricular thalamic nucleusipsiPV2
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus caudal partipsiPVca2
Paraventricular thalamic nucleus dorsal partipsiPVdo2
Paraventricular thalamic nucleus rostral partipsiPVr2
Paraventricular thalamic nucleus ventral partipsiPVV2
Reuniens thalamic nucleusipsiRe0
Subfornical organipsiSFO0.5
Posterior intralaminar thalamic nucleusipsiPIL-0.5
Posterior groupipsiPTG2
Subparafascicular thalamic nucleus parvicellular partipsiSPFp-0.5
Zona incertaipsiZI0.5
Lateral habenular nucleusipsiLHb0
RetinaipsiRET1
Anterior basomedial nucleusipsiBMA1
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD0.5
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM3
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV0.5
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-1
Bed nucleus of the stria terminalis medial divisionipsiBSTM-0.5
Bed nucleus of the stria terminalis medial division anterior partipsiBSTMA1
Bed nucleus of the stria terminalis medial division posterior partipsiBSTMP-0.5
Bed nucleus of the stria terminalis medial division posterointermediate partipsiBSTMPI1
Bed nucleus of the stria terminalis medial division posteromedial partipsiBSTMPM2.5
Bed nucleus of the stria terminalis medial division ventral partipsiBSTMV1
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd3
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif0.5
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv0.5
Bed nucleus of the stria terminalis encapsulated partipsiBSTenc3
Central extended amygdala groupipsiCEXA-0.5
Posterior amygdaloid nucleusipsiCOAp4
Posterolateral cortical nucleusipsiPLCo-0.5
Medial extended amygdalaipsiMEXA-1
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus anterodorsal partipsiMeAD1.5
Medial amygdaloid nucleus anteroventral partipsiMeAV0.5
Medial amygdaloid nucleus posterodorsal partipsiMePD4
Medial amygdaloid nucleus posteroventral partipsiMePV1.5
Medial amygdaloid nucleus ventral partipsiMeV-0.5
Amygdalohippocampal areaipsiAHi4
Posteromedial cortical nucleusipsiPMCo1
Globus pallidusipsiGP2
Ventral pallidumipsiVP0
Accumbens nucleusipsiAc0
Caudate putamenipsiCPu0
Subthalamic nucleusipsiSTh0
Field CA1 of hippocampus ventral partipsiCA1v1
SubiculumipsiS1
Subiculum ventral partipsiSv-0.5
Subiculum ventral distal partipsiSvd0
Midmediolateral caudal part of the ventral subiculumipsiSvcMM-0.5
Subiculum ventral proximal partipsiSvp0
Prelimbic cortexipsiPrL3
Infralimbic cortexipsiIL3
Intergeniculate leafipsiIGL-0.5
Interpeduncular nucleusipsiIP2.5
Lateral septal nucleusipsiLS2.5
Lateral septal nucleus dorsal partipsiLSD3
Lateral septal nucleus intermediate partipsiLSI1
Lateral septal nucleus rostral partipsiLSr2
Ventrally lateral septal nucleus rostral part medial zoneipsiLSrmV1
Lateral septal nucleus ventral partipsiLSV3
Septohypothalamic nucleusipsiSHy2
Ventromedial part of the ventrolateral septal regionipsiVMVLSER3
Central gray dorsal partcontraCGD-0.5
Central gray lateral partcontraCGL-0.5
Central gray ventral areacontraCGva-0.5
Central gray mesencephalic partcontraCGM-0.5
Central gray pons partcontraCGP0.5
Ventrolateral periaqueductal graycontraVLPAG0.5
Periventricular gray mattercontraPVG-0.5
Ventral tegmental area A10contraVTA-0.5
Caudal linear nucleus of the raphecontraCLi0.5
Peripeduncular nucleuscontraPP-0.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
Laterodorsal tegmental nucleus ventral partcontraLDTgV-0.5
Laterodorsal tegmental nucleus rostral partcontraLDTgR-0.5
Pedunculopontine tegmental nucleuscontraPPTg-0.5
CerebellumcontraCERE1
Barringtons nucleuscontraBar0.5
Locus coeruleuscontraLC0.5
Locus coeruleus rostral partcontraLCRo-0.5
Locus coeruleus ventral partcontraLCv-0.5
Cuneiforme nucleuscontraCnF-0.5
Parabrachial nucleuscontraPB1
Lateral parabrachial nucleus central partcontraLPBC0.5
Lateral parabrachial nucleus superior partcontraLPBS0.5
Parabrachial nucleus dorsal partcontraPBD-0.5
Parabrachial nucleus rostral partcontraPBro-0.5
Lateral reticular nucleuscontraLRt-0.5
Medullary reticular nucleus dorsal partcontraMdDd2
Nucleus of the solitary tractcontraSol1
Nucleus of the solitary tract medial partcontraSolM0.5
Nucleus of the solitary tract rostrolateral partcontraSolRL-0.5
Caudal medioventral nucleus of the solitary tractcontraCMVSol-0.5
Dorsal raphe nucleuscontraDR0.5
Dorsal raphe nucleus rostral partcontraDRr-0.5
Dorsal raphe nucleus ventral partcontraDRV-0.5
Median raphe nucleuscontraMnR0.5
Pontine raphe nucleuscontraPnR-0.5
Raphe magnus nucleus lateral partcontraRMgL-0.5
Raphe obscurus nucleuscontraROb-0.5
Ventral lateral medulla oblongatacontraMVL0.5
Medial septal nucleuscontraMS1
Substantia innominatacontraSI-0.5
Lateral preoptic areacontraLPO0.5
Medial preoptic areacontraMPA0.5
Anterodorsal preoptic nucleuscontraADP0.5
Medial preoptic nucleuscontraMPO-0.5
Median preoptic nucleuscontraMnPO0.5
Dorsal tuberomammillary nucleuscontraDTM0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral hypothalamic areacontraLH0.5
Lateroanterior hypothalamic nucleuscontraLAH0.5
Striohypothalamic nucleuscontraStHy0.5
Anterior hypothalamic area central partcontraAHAC0.5
Dorsal hypothalamic areacontraDA0.5
Dorsomedial hypothalamic nucleus dorsal partcontraDMD0.5
Dorsomedial hypothalamic nucleus ventral partcontraDMV0.5
Parastriatal nucleuscontraPS0.5
Posterior hypothalamic areacontraPHA0.5
Posterior hypothalamic nucleuscontraPH-0.5
Subparaventricular zonecontraSuPZ0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA0.5
Ventromedial hypothalamic nucleus posterior partcontraVMHP0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL0.5
Arcuate nucleuscontraArc-0.5
Arcuate nucleus dorsal partcontraArcD0.5
Arcuate nucleus lateral partcontraArcL0.5
Arcuate hypothalamic nucleus lateroposterior partcontraArcLP0.5
Arcuate nucleus medial partcontraArcM0.5
Arcuate hypothalamic nucleus medial posterior partcontraArcMP0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]contraPaMP0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Periventricular hypothalamic nucleuscontraPe0.5
Suprachiasmatic nucleus central divisioncontraSChc0.5
Suprachiasmatic nucleus dorsolateral partcontraSChDL0.5
Suprachiasmatic nucleus dorsomedial partcontraSCnDM0.5
Suprachiasmatic nucleus ventrolateral partcontraSCnVL0.5
Suprachiasmatic nucleus ventromedial partcontraSChVM0.5
Premammillary nucleus dorsal partcontraPMD0.5
Premammillary nucleus ventral partcontraPMV0.5
Supramammillar nucleus medial partcontraSuMM0.5
Perifornical nucleuscontraPeF-0.5
Perifornical nucleus at the level of the paraventricular hypothalamic nucleus anterior parvicellular partcontraPeFLPaAP-0.5
Perifornical nucleus caudal to the paraventricular hypothalamic nucleus anterior parvicellular partcontraPeFCPaAP-0.5
Retrochiasmatic areacontraRCh0.5
Anterior group of the dorsal thalamuscontraATN0
Mediodorsal thalamic nucleuscontraMD1.5
Paraventricular thalamic nucleuscontraPV1
Paraventricular thalamic nucleus anterior partcontraPVA0.5
Subfornical organcontraSFO0.5
Posterior groupcontraPTG-0.5
Bed nucleus of the stria terminalis medial division anterior partcontraBSTMA0.5
Bed nucleus of the stria terminalis medial division posterointermediate partcontraBSTMPI0.5
Bed nucleus of the stria terminalis medial division posteromedial partcontraBSTMPM0.5
Bed nucleus of the stria terminalis medial division ventral partcontraBSTMV0.5
Posterior amygdaloid nucleuscontraCOAp1
Medial amygdaloid nucleuscontraMe-0.5
Medial amygdaloid nucleus anterodorsal partcontraMeAD0.5
Medial amygdaloid nucleus posterodorsal partcontraMePD0.5
Medial amygdaloid nucleus posteroventral partcontraMePV0.5
Globus palliduscontraGP0
Field CA1 of hippocampus ventral partcontraCA1v0
Interpeduncular nucleuscontraIP1
Lateral septal nucleuscontraLS-0.5
Lateral septal nucleus intermediate partcontraLSI0.5
Lateral septal nucleus ventral partcontraLSV0.5
Septohypothalamic nucleuscontraSHy-0.5
Stomach wallipsiOrgsStomWS-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications