University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Ammon horn left


Abbreviation
AmH
Color       
Superior regionsHippocampal formation

SynonymsAbbr.Language
 CA 
Ammon's horn  
Ammons horn  
Ammon hornAmHEng
Hippocampus Eng
Hippocampus proper Eng

SubregionsSide
Mid-septotemporal levels of the ammon's hornleft
Field CA1 of hippocampusleft
Field CA2 of hippocampusleft
Field CA3 of hippocampusleft
Field CA4 of hippocampusleft
Ammon horn layersleft
Rostro dorsal part of the ammon's hornleft
Regio inferior of the Ammon's hornleft
Ammon horn opposite the fimbrialeft
Ammon horn rostroventral arealeft
CA1-CA2 transition zoneleft
Ammon horn dorsal partleft

Output to

NameSideAbbr.WeightDetails
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Interoanteromedial thalamic nucleusipsiIAM0
Paraventricular thalamic nucleusipsiPV0
Reuniens thalamic nucleus caudomedial divisionipsiRecm1
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl1
Medial striatumipsiCPum-0.5
Medial entorhinal cortex layer 5ipsiMEntLyL52
Precommissural fornixipsipcf-0.5
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus dorsal partipsiLSD-1
Lateral septal nucleus intermediate partipsiLSI-1
Lateral septal nucleus rostral partipsiLSr2
Septofimbrial nucleusipsiSFi3

Input from

NameSideAbbr.WeightDetails
Median raphe nucleusipsiMnR3
Rostral ventrolateral medullaipsiRVLM-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Lateral hypothalamic areaipsiLH1
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo1
Supramammillar nucleusipsiSuM-0.5
Supramammillar nucleus lateral part lateral subpartipsiSuMLL2
Supramammillar nucleus lateral part medial subpartipsiSuMLM2
Supramammillar nucleus medial partipsiSuMM1
Paratenial thalamic nucleusipsiPT3
Paraventricular thalamic nucleus anterior partipsiPVA3
Paraventricular thalamic nucleus caudal partipsiPVca1
Reuniens thalamic nucleusipsiRe-0.5
Zona incertaipsiZI1
Anterior basomedial nucleusipsiBMA0
Ventrolateral part of the lateral nucleusipsiLaVL0
Amygdalopiriform transition areaipsiAPir-1
Anterior cortical amygdaloid nucleusipsiACo0.5
Medial accumbensipsiAcbM-0.5
Anterior hippocampal formationipsiAHCf-0.5
PresubiculumipsiPrS0
ParasubiculumipsiPaS0
Entorhinal cortexipsiEnt-0.5
Intermediate entorhinal cortexipsiIEnt-0.5
Lateral entorhinal cortexipsiLEnt3
Medial entorhinal cortex dorsal partipsiMEntD-0.5
Interpeduncular nucleus caudal subnucleus lateral partipsiIPCL2
Interpeduncular nucleus dorsal subnucleus magnocellular partipsiIPRm2
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus ventral partipsiLSV-0.5
Paratenial thalamic nucleuscontraPT-0.5
Paraventricular thalamic nucleus anterior partcontraPVA-0.5
Paraventricular thalamic nucleus caudal partcontraPVca1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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