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Rat connectome



Field CA1 of hippocampus ventral part right


Abbreviation
CA1v
Color       
Superior regionsField CA1 of hippocampus

SynonymsAbbr.Language
Field CA1 of hippocampus ventral partCA1v 
Field CA1 of hippocampus ventral portion  
Ventral parts of CA1 Eng
Ventral hippocampus CA Eng
Ventral region of CA1 Eng
Ventral region of the field CA1 Eng

SubregionsSide
Field CA1 of hippocampus ventral layersright
Ventral tip of CA1right
Field CA1 of hippocampus ventral thirdright
Field CA1 of hippocampus ventral two-thirdsright
Field CA1 of hippocampus extreme ventral partright

Output to

NameSideAbbr.WeightDetails
Linear nucleus of the raphecontraLIR0
Median raphe nucleuscontraMnR0
Nucleus of the diagonal band of Broca ventral partcontraVDBV0.5
Medial septal nucleuscontraMS0.5
Medial preoptic areacontraMPA0
Medial preoptic nucleuscontraMPO0
Lateral hypothalamic areacontraLH0
Supramammillar nucleuscontraSuM0
Reuniens thalamic nucleuscontraRe0
Basolateral amygdaloid nucleuscontraBL0
Medial prefrontal cortexcontramPFC0
Linear nucleus of the rapheipsiLIR1
Median raphe nucleusipsiMnR1
Endopiriform systemipsiEnN2
Dorsal endopiriform nucleusipsiDEn2
Ventral endopiriform nucleusipsiVEn1
Nucleus of the diagonal band of Broca ventral partipsiVDBV2
Medial septal nucleusipsiMS2
Medial preoptic areaipsiMPA2
Medial preoptic nucleusipsiMPO1
Dorsal tenia tectaipsiDTT2
Ventral tenia tectaipsiVTT1.5
Lateral hypothalamic areaipsiLH1.5
Supramammillar nucleusipsiSuM1.5
Reuniens thalamic nucleusipsiRe2
Pineal glandipsiPi2
Basal nucleusipsiBnc3
Basolateral amygdaloid nucleusipsiBL1
Anterior basolateral nucleusipsiBLA2.5
Posterior basolateral nucleusipsiBLP2
Anterior basomedial nucleusipsiBMA2.5
Posterior basomedial nucleusipsiBMP2
Lateral amygdaloid nucleusipsiLA3
Bed nucleus of the stria terminalis posterior divisionipsiBSTP3
Central amygdaloid nucleusipsiCe-0.5
Amygdalopiriform transition areaipsiAPir1.5
Anterior cortical amygdaloid nucleusipsiACo2
Posterolateral cortical nucleusipsiPLCo2
Nucleus of the lateral olfactory tractipsiLOT2
Posteromedial cortical nucleusipsiPMCo3
ClaustrumipsiCl2
Accumbens nucleusipsiAc-0.5
Accumbens nucleus anteromedial partipsiAcAM3
Caudomedial accumbensipsiAcbCM2
Dorsal accumbensipsiAcbD1
Posteromedial accumbensipsiAcbPM1
Dentate gyrusipsiDG1.5
Field CA1 of hippocampus dorsalipsiCA1d0
Field CA3 of hippocampusipsiCA33
Subiculum dorsal partipsiSd0
Subiculum ventral partipsiSv4
Indusium griseumipsiIG0
PresubiculumipsiPrS1
ParasubiculumipsiPaS3
PostsubiculumipsiPost0
Lateral entorhinal cortexipsiLEnt3
Lateral entorhinal cortex lateral partipsiLEntLa2
Lateral entorhinal cortex medial partipsiLEntM4
Lateral entorhinal cortex intermediate partipsiLEnti3
Medial entorhinal cortexipsiMEnt3
Medial entorhinal cortex dorsal partipsiMEntD4
Medial entorhinal cortex lateral partipsiMEntL1
Medial entorhinal field medial partipsiMEntFm3
Medial entorhinal cortex intermediate partipsiMEntFim0.5
Piriform cortexipsiPir2
Postpiriform transition areaipsiTR3
Retrosplenial dorsalipsiRSd0
Retrosplenial ventral partipsiRSPv0
Retrosplenial ventral aipsiRSv-a0
Retrosplenial area ventral part zone b/cipsiRSPv-bc0
Retrosplenial agranular cortexipsiRSA0
Retrosplenial granular cortexipsiRSGra0
Dorsal anterior cingulate cortexipsiDACC2
Ventral anterior cingulate cortexipsiVACC2
Prelimbic cortexipsiPrL4
Prelimbic cortex dorsal part layer 5ipsiPrLdL5-0.5
Infralimbic cortexipsiIL3
Infralimbic cortex dorsal part layer 5ipsiILDoL5-0.5
Infralimbic cortex ventral part layer 2ipsiILvL2-0.5
Infralimbic cortex ventral part layer 3ipsiILvL3-0.5
Infralimbic cortex ventral part layer 4ipsiILvL4-0.5
Infralimbic cortex ventral part layer 5ipsiILvL5-0.5
Parietal cortex posterior areaipsiParP2
Temporal cortexipsiTE2
Temporal association cortex 1ipsiTeA2
Auditory regionsipsiAU1.5
Dorsal auditory areasipsiAUDd1
Posterior auditory areaipsiAUDpo2
Primary auditory cortexipsiAu11.5
Secondary auditory cortex dorsal areaipsiAuD1
Secondary auditory cortex ventral areaipsiAuV1
Ventral auditory areasipsiAUDv1
Agranular insular cortexipsiAI2
Agranular insular cortex dorsal partipsiAID2
Agranular insular cortex posterior partipsiAIP2
Agranular insular cortex ventral partipsiAIV2
Gustatory dysgranular insular cortexipsiDIg2
Granular insular cortexipsiGI1.5
Perirhinal cortexipsiA352
Ectorhinal cortexipsiA362
Postrhinal cortexipsiPOR1
Dorsal peduncular cortexipsiDP-0.5
Motoric regionsipsiM1
Lateral agranular prefrontal cortexipsiAGl0
Medial prefrontal cortexipsimPFC-0.5
Medial agranular prefrontal cortexipsiAGm0.5
Primary somatosensory cortexipsiS10
Secondary somatosensory cortexipsiS20
Supplemental somatosensory areaipsiSSs2
Primary visual cortexipsiV11
Primary visual cortex binocular areaipsiV1B0.5
Laterolateral cortical visual areaipsiVISll1
Mediolateral cortical visual areaipsiVISlm0
Posterolateral cortical visual areaipsiVISpl1
Anteromedial cortical visual areaipsiVISam0.5
Posteromedial cortical visual areaipsiVISpm1
Lateral orbital cortexipsiLO0
Ventral orbital cortexipsiVO0
Ventrolateral orbital areaipsiVLO2
Accessory olfactory bulbipsiAOB2.5
Mitral cell layer of the accessory olfactory bulbipsiAOBml-0.5
Granule cell layer of the accessory olfactory bulbipsiAOBgl-0.5
Olfactory bulb A16ipsiMOB2
Anterior olfactory nucleusipsiAON3
Dorsal lateral olfactory tractipsidlot-0.5
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus rostral part medial zoneipsiLSrm-0.5

Input from

NameSideAbbr.WeightDetails
Locus coeruleuscontraLC1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Perifornical nucleuscontraPeF-0.5
Locus coeruleus coreipsiLCco1
Locus coeruleus dorsal partipsiLCD3
Locus coeruleus middle partipsiLCmi3
Locus coeruleus posterior partipsiLCp3
Locus coeruleus ventral partipsiLCv0.5
Locus coeruleus extreme ventromedial partipsiEVMLC0
Subcoeruleus nucleusipsiSubC0
Dorsal endopiriform nucleusipsiDEn1
Ventral endopiriform nucleusipsiVEn0
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm1
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Nucleus of the vertical limb of the diagonal band caudal partipsiVDBc1
Nucleus of the vertical limb of the diagonal band rostromedial partipsiVDBrm2.5
Medial septal nucleusipsiMS-0.5
Medial septal nucleus lateral partipsiMSLa3
Medial septal nucleus medial partipsiMSm3
Anterior hypothalamic area central partipsiAHAC-2
Anterior hypothalamic area posterior partipsiAHAP1
Anterior hypothalamic nucleusipsiAHn-2
Anterior part of the anterior hypothalamic nucleusipsiAHna-2
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Perifornical nucleusipsiPeF-0.5
Retrochiasmatic area lateral partipsiRChL-2
Reuniens thalamic nucleusipsiRe3
Nucleus reuniens rostral division dorsal partipsiRERd-0.5
Reuniens thalamic nucleus rostrocaudal level 1ipsiRercL1-0.5
Reuniens thalamic nucleus rostrocaudal level 2ipsiRercL2-0.5
Reuniens thalamic nucleus rostrocaudal level 3ipsiRercL3-0.5
Reuniens thalamic nucleus rostrocaudal level 4ipsiRercL4-0.5
Reuniens thalamic nucleus rostrocaudal level 5ipsiRercL5-0.5
Reuniens thalamic nucleus rostrocaudal level 6ipsiRercL6-0.5
Reuniens thalamic nucleus dorsocaudal partipsiRedc1
Anterior basolateral nucleusipsiBLA0.5
Posterior basolateral nucleusipsiBLP2
Anterior basomedial nucleusipsiBMA0.5
Posterior basomedial nucleusipsiBMP2
Lateral amygdaloid nucleusipsiLA2
Ventromedial part of the lateral nucleusipsiLaVM2
Amygdalopiriform transition areaipsiAPir2
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp2.5
Posterolateral cortical nucleusipsiPLCo2
Posteromedial cortical nucleusipsiPMCo4
ClaustrumipsiCl0
Dentate gyrusipsiDG-0.5
Field CA1 of hippocampus dorsalipsiCA1d0
Field CA2 of hippocampusipsiCA2-0.5
Field CA3 of hippocampusipsiCA33
Subiculum dorsal partipsiSd0
Subiculum ventral partipsiSv0
Indusium griseumipsiIG0
PresubiculumipsiPrS0
ParasubiculumipsiPaS2
PostsubiculumipsiPost1
Lateral entorhinal cortexipsiLEnt3
Lateral entorhinal cortex lateral partipsiLEntLa3
Lateral entorhinal cortex medial partipsiLEntM4
Lateral entorhinal cortex intermediate partipsiLEnti3
Medial entorhinal cortexipsiMEnt2
Medial entorhinal cortex dorsal partipsiMEntD1
Medial entorhinal cortex lateral partipsiMEntL2
Medial entorhinal field medial partipsiMEntFm4
Piriform cortexipsiPir0
Postpiriform transition areaipsiTR2
Retrosplenial ventral partipsiRSPv0
Retrosplenial ventral aipsiRSv-a0
Retrosplenial agranular cortexipsiRSA0
Dorsal anterior cingulate cortexipsiDACC0
Ventral anterior cingulate cortexipsiVACC0
Prelimbic cortexipsiPrL0
Infralimbic cortexipsiIL1
Temporal cortexipsiTE0
Auditory regionsipsiAU0
Primary auditory cortexipsiAu10
Ventral auditory areasipsiAUDv0
Agranular insular cortex posterior partipsiAIP0
Granular insular cortexipsiGI0
Perirhinal cortexipsiA350.5
Ectorhinal cortexipsiA360.5
Postrhinal cortexipsiPOR-0.5
Motoric regionsipsiM0
Lateral agranular prefrontal cortexipsiAGl0
Medial agranular prefrontal cortexipsiAGm0
Primary somatosensory cortexipsiS10
Secondary somatosensory cortexipsiS20
Primary visual cortexipsiV10
Secondary visual cortex lateral areaipsiV2L0
Primary visual cortex binocular areaipsiV1B0
Laterolateral cortical visual areaipsiVISll0
Anteromedial cortical visual areaipsiVISam0
Ventral orbital cortexipsiVO0
Interpeduncular nucleus caudal subnucleus lateral partipsiIPCL-0.5
Interpeduncular nucleus caudal portion dorsal aspectipsiIPCD-0.5
Interpeduncular nucleus rostral subnucleus midrostrocaudal partipsiIPRmrc-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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