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Rat connectome



Spinal cord layer 4 T13 right


Abbreviation
SCL4T13
Color       
Superior regionsNucleus proprius T13

SynonymsAbbr.Language
Spinal cord layer 4 T13SCL4T13Eng

SubregionsSide
Medial part of spinal cord layer 4 T12right

Output to

NameSideAbbr.WeightDetails
MesencephaloncontraMEC0.5
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Periaqueductal graycontraPAG-0.5
Lateral periaqueductal graycontraLPAG0.5
Periaqueductal gray dorsal partcontraPAGd1
Periaqueductal gray lateroventral partcontraPAGLV1
Ventrolateral periaqueductal graycontraVLPAG0.5
Red nucleuscontraR-0.5
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC-0.5
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Ansiform lobule crus 1contraCrus10
Paramedian lobulecontraPM1
Simple lobulecontraSim0
Anterior lobecontraAnL1
Cerebellar lobule 2contraCERL21
Cerebellar lobule 3contraCERL31
Cerebellar lobule 1contraCERL11
Cerebellar lobule 4contraCERL41
Cerebellar lobule 5contraCERL51
Paravermal region of anterior lobecontraPVAnL0
Caudal part of cerebellumcontraCERCca1
Cerebellar lobule 8contraCERL81
Deep mesencephalic nucleuscontraDpMe1
Cuneiforme nucleuscontraCnF3
Lateral parabrachial nucleus lateral partcontraLPBL0
Parabrachial nucleus central lateral partcontraPBCeL0
Parabrachial nucleus dorsolateral partcontraPBDL0
Parabrachial nucleus superior lateralcontraPBSL0
Lateral reticular nucleuscontraLRt-0.5
Medullary reticular nucleus dorsal partcontraMdDd2
Spinal vestibular nucleuscontraSpVe-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract lateral partcontraSolL2
Nucleus of the solitary tract medial partcontraSolM2
Caudal ventrolateral medullacontraCVLM1
Caudal ventrolateral medulla lateral partcontraCVLMl2
Dorsal column nucleicontraDCN0.5
Cuneate nucleuscontraCu-0.5
Nucleus ZcontraZ1
Lateral paragigantocellular nucleuscontraLPGi-0.5
Paragigantocellular reticular nucleus medial partcontraPGiM-0.5
Lateral hypothalamic areacontraLH3
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
Posterior thalamic nuclear groupcontraPo2
Medial part of posterior thalamic nuclear groupcontraPoM-0.5
Posterior thalamic nuclear group triangular partcontraPoT2
Mediodorsal thalamic nucleuscontraMD2
Ventral posterolateral thalamic nucleus parvicellular partcontraVPLpc-0.5
Posterior intralaminar thalamic nucleuscontraPIL-0.5
Pretectal regioncontraPRT-0.5
Anterior pretectal nucleuscontraAPT-0.5
Posterior pretectal nucleuscontraPPT-0.5
Dorsolateral funiculuscontradlft-2
Cervical segment 1contraCS11
Cervical segment 2contraCS21
Cervical segment 3contraCS31
Cervical segment 4contraCS41
Cervical segment 5contraCS51
Cervical segment 6contraCS61
Cervical segment 7contraCS71
Cervical segment 8contraCS81
Thoracal segment 1contraT11
Thoracal segment 2contraT21
Thoracal segment 3contraT31
Thoracal segment 4contraT41
Thoracal segment 5contraT51
Thoracal segment 6contraT61
Thoracal segment 7contraT71
Thoracal segment 8contraT81
Thoracal segment 9contraT91
Thoracal segment 10contraT101
Thoracal segment 11contraT111
Thoracal segment 12contraT121
Thoracal segment 13contraT131
Lumbar segment 1contraL11
Lumbar segment 2contraL21
Lumbar segment 3contraL31
Lumbar segment 4contraL41
Lumbar segment 5contraL51
Lumbar segment 6contraL61
Sacral segment 1contraSa11
Sacral segment 2contraSa21
Sacral segment 3contraSa31
Sacral segment 4contraSa41
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray lateroventral partipsiPAGLV0.5
Ventrolateral periaqueductal grayipsiVLPAG0.5
Ansiform lobule crus 1ipsiCrus10
Paramedian lobuleipsiPM1
Simple lobuleipsiSim0
Anterior lobeipsiAnL1
Cerebellar lobule 2ipsiCERL23
Cerebellar lobule 3ipsiCERL33
Cerebellar lobule 1ipsiCERL13
Cerebellar lobule 4ipsiCERL43
Cerebellar lobule 5ipsiCERL53
Paravermal region of anterior lobeipsiPVAnL0
Caudal part of cerebellumipsiCERCca1
Cerebellar lobule 7ipsiCERL7-0.5
Cerebellar lobule 8ipsiCERL83
Cerebellar lobule 6ipsiCERL6-0.5
Lateral parabrachial nucleus internal partipsiLPBI2
Lateral parabrachial nucleus lateral partipsiLPBL0
Parabrachial nucleus central lateral partipsiPBCeL1
Parabrachial nucleus dorsolateral partipsiPBDL1
Parabrachial nucleus superior lateralipsiPBSL1
Gigantocellular reticular nucleusipsiGi2
Lateral reticular nucleusipsiLRt2
Subnucleus reticularis dorsalisipsiSRD2
Medullary reticular nucleus dorsal partipsiMdDd3
Dorsal part of the medullary reticular nucleus dorsal partipsidMdDd3
Spinal vestibular nucleusipsiSpVe-0.5
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract commissural partipsiSolC-0.5
Nucleus of the solitary tract lateral partipsiSolL3
Nucleus of the solitary tract medial partipsiSolM2
Caudal ventrolateral medulla lateral partipsiCVLMl3
Dorsal column nucleiipsiDCN3
Cuneate nucleusipsiCu-0.5
Gracile nucleus principal partipsiGr-0.5
Nucleus ZipsiZ3
Lateral paragigantocellular nucleusipsiLPGi2
Dorsal regionipsiDHR-0.5
Lateral hypothalamic areaipsiLH1.5
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1.5
Posterior hypothalamic areaipsiPHA-0.5
Paraventricular hypothalamic nucleusipsiPa1.5
Suprachiasmatic nucleusipsiSCh1.5
Supraoptic nucleus [Supraoptic region]ipsiSO1.5
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC-0.5
Basal gangliaipsiBG-0.5
Infralimbic cortexipsiIL-0.5
Medial orbital cortexipsiMO-0.5
Cervical segment 1ipsiCS13
Lateral cervical nucleus C1ipsiLatCC1-0.5
Cervical segment 2ipsiCS23
Lateral cervical nucleus C2ipsiLatCC2-0.5
Cervical segment 3ipsiCS33
Lateral cervical nucleus C3ipsiLatCC3-0.5
Cervical segment 4ipsiCS43
Lateral cervical nucleus C4ipsiLatCC4-0.5
Cervical segment 5ipsiCS53
Cervical segment 6ipsiCS63
Cervical segment 7ipsiCS73
Cervical segment 8ipsiCS83
Thoracal segment 1ipsiT13
Thoracal segment 2ipsiT23
Thoracal segment 3ipsiT33
Thoracal segment 4ipsiT43
Thoracal segment 5ipsiT53
Thoracal segment 6ipsiT63
Thoracal segment 7ipsiT73
Thoracal segment 8ipsiT83
Area X T8ipsiSCL10T8-0.5
Spinal cord layer 5 T8ipsiSCL5T8-0.5
Spinal cord layer 6 T8ipsiSCL6T8-0.5
Spinal cord layer 3 T8ipsiSCL3T8-0.5
Spinal cord layer 4 T8ipsiSCL4T8-0.5
Spinal cord layer 7 T8ipsiSCL7T8-0.5
Spinal cord layer 8 T8ipsiSCL8T8-0.5
Spinal cord layer 9 T8ipsiSCL9T8-0.5
Thoracal segment 9ipsiT93
Intermediolateral cell column T9ipsiIMLT9-0.5
Area X T9ipsiSCL10T9-0.5
Spinal cord layer 5 T9ipsiSCL5T9-0.5
Spinal cord layer 6 T9ipsiSCL6T9-0.5
Spinal cord layer 3 T9ipsiSCL3T9-0.5
Spinal cord layer 4 T9ipsiSCL4T9-0.5
Spinal cord layer 7 T9ipsiSCL7T9-0.5
Spinal cord layer 8 T9ipsiSCL8T9-0.5
Spinal cord layer 9 T9ipsiSCL9T9-0.5
Thoracal segment 10ipsiT103
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 5 T10ipsiSCL5T10-0.5
Spinal cord layer 6 T10ipsiSCL6T10-0.5
Spinal cord layer 3 T10ipsiSCL3T10-0.5
Spinal cord layer 4 T10ipsiSCL4T10-0.5
Spinal cord layer 7 T10ipsiSCL7T10-0.5
Spinal cord layer 8 T10ipsiSCL8T10-0.5
Spinal cord layer 9 T10ipsiSCL9T10-0.5
Thoracal segment 11ipsiT113
Dorsal root ganglion T11ipsiDRGT11-0.5
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 5 T11ipsiSCL5T11-0.5
Spinal cord layer 6 T11ipsiSCL6T11-0.5
Spinal cord layer 3 T11ipsiSCL3T11-0.5
Spinal cord layer 4 T11ipsiSCL4T11-0.5
Spinal cord layer 7 T11ipsiSCL7T11-0.5
Spinal cord layer 8 T11ipsiSCL8T11-0.5
Spinal cord layer 9 T11ipsiSCL9T11-0.5
Thoracal segment 12ipsiT123
Dorsal root ganglion T12ipsiDRGT12-0.5
Area X T12ipsiSCL10T12-0.5
Spinal cord layer 5 T12ipsiSCL5T12-0.5
Spinal cord layer 6 T12ipsiSCL6T12-0.5
Spinal cord layer 3 T12ipsiSCL3T12-0.5
Spinal cord layer 4 T12ipsiSCL4T12-0.5
Spinal cord layer 7 T12ipsiSCL7T12-0.5
Spinal cord layer 8 T12ipsiSCL8T12-0.5
Spinal cord layer 9 T12ipsiSCL9T12-0.5
Thoracal segment 13ipsiT133
Dorsal root ganglion T13ipsiDRGT13-0.5
Lumbar segment 1ipsiL13
Dorsal root ganglion L1ipsiDRGL1-0.5
Area X L1ipsiSCL10L1-0.5
Spinal cord layer 5 L1ipsiSCL5L1-0.5
Spinal cord layer 6 L1ipsiSCL6L1-0.5
Spinal cord layer 3 L1ipsiSCL3L1-0.5
Spinal cord layer 4 L1ipsiSCL4L1-0.5
Spinal cord layer 7 L1ipsiSCL7L1-0.5
Spinal cord layer 8 L1ipsiSCL8L1-0.5
Spinal cord layer 9 L1ipsiSCL9L1-0.5
Lumbar segment 2ipsiL23
Area X L2ipsiSCL10L2-0.5
Spinal cord layer 5 L2ipsiSCL5L2-0.5
Spinal cord layer 6 L2ipsiSCL6L2-0.5
Spinal cord layer 3 L2ipsiSCL3L2-0.5
Spinal cord layer 4 L2ipsiSCL4L2-0.5
Spinal cord layer 7 L2ipsiSCL7L2-0.5
Spinal cord layer 8 L2ipsiSCL8L2-0.5
Spinal cord layer 9 L2ipsiSCL9L2-0.5
Lumbar segment 3ipsiL33
Dorsal root ganglion L3ipsiDRGL3-0.5
Area X L3ipsiSCL10L3-0.5
Spinal cord layer 5 L3ipsiSCL5L3-0.5
Spinal cord layer 6 L3ipsiSCL6L3-0.5
Spinal cord layer 3 L3ipsiSCL3L3-0.5
Spinal cord layer 4 L3ipsiSCL4L3-0.5
Spinal cord layer 7 L3ipsiSCL7L3-0.5
Spinal cord layer 8 L3ipsiSCL8L3-0.5
Spinal cord layer 9 L3ipsiSCL9L3-0.5
Lumbar segment 4ipsiL43
Dorsal root ganglion L4ipsiDRGL4-0.5
Area X L4ipsiSCL10L4-0.5
Spinal cord layer 5 L4ipsiSCL5L4-0.5
Spinal cord layer 6 L4ipsiSCL6L4-0.5
Spinal cord layer 3 L4ipsiSCL3L4-0.5
Spinal cord layer 4 L4ipsiSCL4L4-0.5
Spinal cord layer 7 L4ipsiSCL7L4-0.5
Spinal cord layer 8 L4ipsiSCL8L4-0.5
Spinal cord layer 9 L4ipsiSCL9L4-0.5
Lumbar segment 5ipsiL53
Dorsal root ganglion L5ipsiDRGL5-0.5
Area X L5ipsiSCL10L5-0.5
Spinal cord layer 5 L5ipsiSCL5L5-0.5
Spinal cord layer 6 L5ipsiSCL6L5-0.5
Spinal cord layer 3 L5ipsiSCL3L5-0.5
Spinal cord layer 4 L5ipsiSCL4L5-0.5
Spinal cord layer 7 L5ipsiSCL7L5-0.5
Spinal cord layer 8 L5ipsiSCL8L5-0.5
Spinal cord layer 9 L5ipsiSCL9L5-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL51
Lumbar segment 6ipsiL63
Dorsal root ganglion L6ipsiDRGL6-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL61
Sacral segment 1ipsiSa13
Sacral segment 2ipsiSa23
Sacral segment 3ipsiSa33
Sacral segment 4ipsiSa43
Tibial nerveipsitibial-0.5
CoripsiOrgsCor-0.5
StomachipsiOrgsStomS-1
EpididymiscontraOrgEpi-0.5
Femoral bone marrowipsiOrgSkFemM-0.5
EpididymisipsiOrgEpi-0.5
TestisipsiOrgTest1

Input from

NameSideAbbr.WeightDetails
Pedunculopontine tegmental nucleuscontraPPTg3
A4 noradrenaline cellscontraA40
A5 noradrenaline cellscontraA51
A7 noradrenaline cellscontraA71
Locus coeruleuscontraLC3
Caudal part of ventral locus coeruleuscontraLCveca0.5
Rostroventrolateral reticular nucleuscontraRVL-0.5
Cuneiforme nucleuscontraCnF-2
Gigantocellular reticular nucleuscontraGi0.5
Subcoeruleus nucleuscontraSubC1
C2 adrenaline cellscontraC20
Nucleus of the solitary tract commissural partcontraSolC-0.5
Lateral most portion of the ventrolateral medullacontraLMVL-0.5
A1 noradrenergic cellscontraA11
A2 noradrenergic cellscontraA21
Dorsolateral funiculuscontradlft-2
Frontal cortex area 2contraFr23
Parietal association cortexcontraPtA0.5
Insular cortexcontraICX0.5
Prefrontal cortexcontraPFC0.5
Lateral agranular prefrontal cortexcontraAGl3
Primary somatosensory cortexcontraS13
Secondary somatosensory cortexcontraS23
Secondary visual cortexcontraV20.5
Spinal cord layer 3 L2contraSCL3L20.5
Spinal cord layer 4 L2contraSCL4L20.5
Spinal cord layer 2 L2contraSCL2L20.5
Spinal cord layer 3 L3contraSCL3L30.5
Spinal cord layer 4 L3contraSCL4L30.5
Spinal cord layer 2 L3contraSCL2L30.5
Spinal cord layer 3 L4contraSCL3L40.5
Spinal cord layer 4 L4contraSCL4L40.5
Spinal cord layer 2 L4contraSCL2L40.5
Central grayipsiCG1
Red nucleusipsiR2
Ventrolateral tegmental areaipsiVLTg1.5
Pedunculopontine tegmental nucleusipsiPPTg3
Interstitial nucleus of CajalipsiInC1.5
A4 noradrenaline cellsipsiA40
A5 noradrenaline cellsipsiA53
A7 noradrenaline cellsipsiA73
Locus coeruleusipsiLC3
Caudal part of ventral locus coeruleusipsiLCveca0.5
Rostroventrolateral reticular nucleusipsiRVL1
Ventrolateral reticular formationipsiVLRF-0.5
Dorsolateral pontine reticular formationipsiPRNDL1
Koelliker Fuse nucleusipsiKF2
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi1
Dorsal part of the medullary reticular nucleus dorsal partipsidMdDd-0.5
Subcoeruleus nucleusipsiSubC3
C2 adrenaline cellsipsiC20
Nucleus of the solitary tract commissural partipsiSolC1
Raphe magnus nucleusipsiRMg2
Raphe pallidus nucleusipsiRPa3
Lateral most portion of the ventrolateral medullaipsiLMVL-0.5
A1 noradrenergic cellsipsiA11
A2 noradrenergic cellsipsiA21
Rostral part of the ventromedial medulla oblongataipsiRMeObvm-0.5
Lateral hypothalamic areaipsiLH1
A11 dopamine cellsipsiA11-0.5
Zona incertaipsiZI-0.5
Zona incerta rostromedial partipsiZIrm0
Somatomotoric regionsipsiSMR-0.5
Lateral agranular prefrontal cortexipsiAGl3
Hindlimb motor cortex layer 5ipsiHMCxL5-0.5
Medial agranular prefrontal cortexipsiAGm3
Primary somatosensory cortexipsiS13
Secondary somatosensory cortexipsiS23
Area X T8ipsiSCL10T8-0.5
Spinal cord layer 5 T8ipsiSCL5T8-0.5
Spinal cord layer 6 T8ipsiSCL6T8-0.5
Spinal cord layer 3 T8ipsiSCL3T8-0.5
Spinal cord layer 4 T8ipsiSCL4T8-0.5
Spinal cord layer 1 T8ipsiSCL1T8-0.5
Spinal cord layer 2 T8ipsiSCL2T8-0.5
Spinal cord layer 7 T8ipsiSCL7T8-0.5
Spinal cord layer 8 T8ipsiSCL8T8-0.5
Area X T9ipsiSCL10T9-0.5
Spinal cord layer 5 T9ipsiSCL5T9-0.5
Spinal cord layer 6 T9ipsiSCL6T9-0.5
Spinal cord layer 3 T9ipsiSCL3T9-0.5
Spinal cord layer 4 T9ipsiSCL4T9-0.5
Spinal cord layer 1 T9ipsiSCL1T9-0.5
Spinal cord layer 2 T9ipsiSCL2T9-0.5
Spinal cord layer 7 T9ipsiSCL7T9-0.5
Spinal cord layer 8 T9ipsiSCL8T9-0.5
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 5 T10ipsiSCL5T10-0.5
Spinal cord layer 6 T10ipsiSCL6T10-0.5
Spinal cord layer 3 T10ipsiSCL3T10-0.5
Spinal cord layer 4 T10ipsiSCL4T10-0.5
Spinal cord layer 1 T10ipsiSCL1T10-0.5
Spinal cord layer 2 T10ipsiSCL2T10-0.5
Spinal cord layer 7 T10ipsiSCL7T10-0.5
Spinal cord layer 8 T10ipsiSCL8T10-0.5
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 5 T11ipsiSCL5T11-0.5
Spinal cord layer 6 T11ipsiSCL6T11-0.5
Spinal cord layer 3 T11ipsiSCL3T11-0.5
Spinal cord layer 4 T11ipsiSCL4T11-0.5
Spinal cord layer 1 T11ipsiSCL1T11-0.5
Spinal cord layer 2 T11ipsiSCL2T11-0.5
Spinal cord layer 7 T11ipsiSCL7T11-0.5
Spinal cord layer 8 T11ipsiSCL8T11-0.5
Area X T12ipsiSCL10T12-0.5
Spinal cord layer 5 T12ipsiSCL5T12-0.5
Spinal cord layer 6 T12ipsiSCL6T12-0.5
Spinal cord layer 3 T12ipsiSCL3T12-0.5
Spinal cord layer 4 T12ipsiSCL4T12-0.5
Spinal cord layer 1 T12ipsiSCL1T12-0.5
Spinal cord layer 2 T12ipsiSCL2T12-0.5
Spinal cord layer 7 T12ipsiSCL7T12-0.5
Spinal cord layer 8 T12ipsiSCL8T12-0.5
Dorsal root ganglion T13ipsiDRGT13-0.5
Dorsal root ganglion L1ipsiDRGL13
Dorsal root ganglion L2ipsiDRGL23
Spinal cord layer 3 L2ipsiSCL3L23
Spinal cord layer 4 L2ipsiSCL4L23
Spinal cord layer 1 L2ipsiSCL1L23
Spinal cord layer 2 L2ipsiSCL2L23
Dorsal root ganglion L3ipsiDRGL31
Spinal cord layer 3 L3ipsiSCL3L33
Spinal cord layer 4 L3ipsiSCL4L33
Spinal cord layer 1 L3ipsiSCL1L33
Spinal cord layer 2 L3ipsiSCL2L33
Dorsal root ganglion L4ipsiDRGL42
Spinal cord layer 3 L4ipsiSCL3L43
Spinal cord layer 4 L4ipsiSCL4L43
Spinal cord layer 1 L4ipsiSCL1L43
Spinal cord layer 2 L4ipsiSCL2L43
Dorsal root ganglion L5ipsiDRGL51
Dorsal root ganglion L6ipsiDRGL61
Dorsal penile nervecontradpn-0.5
Greater splanchnic nerveipsiAutoNGS1
Inferior mesenteric plexusipsiAutoNimPx0.5
Lateral femoral cutaneous nerveipsifemLC2
Saphenus nerveipsisaph1
Anterior femoral cutaneous nerveipsiafem1
Dorsal penile nerveipsidpn-0.5
Hamstring nerveipsihamstri-0.5
Gastrocnemius nerveipsigastrocn-0.5
Dorsal cervical cutaneous nerve thoracic segment 13 myelinated fibersipsidcnT13A-0.5
Renal nerveipsirenn-0.5
Gastrocnemius muscleipsiMuscGC-0.5
Parietal peritoneumipsiOrgPeriP-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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