University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Primary somatosensory cortex forelimb region layer 6 left


Abbreviation
S1FL6
Color       
Superior regionsDeep layers of the forelimb region of the primary somatosensory cortex

SynonymsAbbr.Language
Primary somatosensory cortex forelimb region layer 6S1FL6 

SubregionsSide
Primary somatosensory cortex forelimb region layer 6aleft
Primary somatosensory cortex forelimb region layer 6bleft

Output to

NameSideAbbr.WeightDetails
Medial pontine nucleusipsiMPoN3
Red nucleusipsiR0
Superior colliculusipsiSC1
Ventrolateral margint of pontine nucleiipsiPVmLP3
Pontine nuclei caudal partipsiBPNc3
Pontine nuclei lateral partipsiBPNL3
Trigeminal sensory nuclear complexipsiTSNC0
Inferior oliveipsiIO0
Anteroventral thalamic nucleus dorsal partipsiAVDo0
Posterior thalamic nuclear groupipsiPo3
Ventrolateral thalamic nucleus dorsal partipsiVLD0
Central part of the ventrolateral thalamic nucleusipsiVLCe3
Lateral ventroposteromedial thalamic nucleusipsiLVPM3
Reticular thalamic nucleusipsiRt3
Zona incerta ventral partipsiZIV0.5
Anterior pretectal nucleusipsiAPT1
Dorsolateral part of the anterior striatumipsiDLAStri1
Posterior caudate putamenipsiCPup3
Primary somatosensory cortex forelimb region forepawipsiS1FP1.5
Primary somatosensory cortex hindlimb leg regionipsiS1HLLe0.5
Primary visual cortex rostral partipsiV1R3
Trigeminal sensory nuclear complexcontraTSNC0
Cuneate nucleuscontraCu3
Internal basilar nucleus C1contraIBC11
Internal basilar nucleus C2contraIBC21
Internal basilar nucleus C3contraIBC31
Internal basilar nucleus C4contraIBC41
Internal basilar nucleus C5contraIBC51
Internal basilar nucleus C6contraIBC61
Internal basilar nucleus C7contraIBC71
Internal basilar nucleus C8contraIBC81
Internal basilar nucleus T1contraIBT11
Internal basilar nucleus T2contraIBT21
Internal basilar nucleus T3contraIBT31
Internal basilar nucleus T4contraIBT41
Internal basilar nucleus T5contraIBT51

Input from

NameSideAbbr.WeightDetails
Perirhinal cortex anterior portionipsiPRha3
Primary somatosensory cortex forelimb region forepawipsiS1FP2.5
Primary somatosensory cortex hindlimb leg regionipsiS1HLLe1
Perirhinal cortex anterior portioncontraPRha1.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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