University of Rostock

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Rat connectome



Zona incerta ventral part left


Abbreviation
ZIV
Color       
Superior regionsZona incerta

SynonymsAbbr.Language
Zona incerta ventral partZIVEng
 vZI 
Ventral sector zona incerta Eng
Ventral zona incerta region Eng

SubregionsSide
Middle part of ventral zona incertaleft
Ventral half of the pars ventralis of the zona incertaleft
Zona incerta most ventral borderleft
Zona incerta ventral caudolateral partleft
Zona incerta ventral caudomedial partleft
Zona incerta ventral part caudal partleft
Zona incerta ventral part lateral partleft
Zona incerta ventral part medial partleft
Zona incerta ventral part rostral partleft
Zona incerta ventral rostrolateral partleft
Zona incerta ventral rostromedial partleft
Light sensitive regions of the zona incerta ventral partleft

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk1
Oculomotor nucleusipsi33
Periaqueductal grayipsiPAG-0.5
Periaqueductal gray rostrolateral partipsiPAGRL3
Pararubral nucleusipsiPaR-0.5
External cortex of the inferior colliculusipsiECIC1
Superior colliculusipsiSC2
Superior colliculus lateral partipsiSCL2
Superior colliculus intermediate layersipsiSCi-0.5
Superior colliculus deep layersipsiSCd2
Superior colliculus deep layers medial partipsiSCdM-0.5
Substantia nigra A9ipsiSN-0.5
Peripeduncular areaipsiPPA2
Ventrolateral tegmental areaipsiVLTg1
Pedunculopontine tegmental nucleusipsiPPTg-0.5
Edinger Westphal nucleusipsiEW3
Lateral ponsipsiLaP1
Pons ventral partipsiPve1
Ventral portion of the ventral pontine regionipsiVPve0.5
Pontine gray properipsiPGp3
Reticulotegmental nucleus of the ponsipsiRtTg3
Pontine nuclei lateral partipsiBPNL1
Pontine nucleus medial partipsiBPNm0.5
Mesencephalic reticular formationipsiMRF-0.5
Pontine reticular nucleusipsiPRN-0.5
Ventrolateral pontine reticular formationipsivlPRF1
Lateral parabrachial nucleusipsiLPB2
Parabrachial nucleus medialipsiPBnMe2
Medullary reticular nucleusipsiMdD-0.5
Nucleus of the solitary tract caudal partipsiSolca1.5
Dorsal motor nucleus of vagusipsi101.5
Raphe nucleiipsiRAN-0.5
Posterior hypothalamic areaipsiPHA-0.5
Incerto hypothalamic area lateral partipsiicHYPOL-0.5
Dorsal part of the lateral geniculate complexipsiLGd1
Centrolateral thalamic nucleusipsiCL2
Parafascicular thalamic nucleusipsiPF3
Posterior thalamic nuclear groupipsiPo3
Posterior thalamic nuclear group medial partipsiPoMe-0.5
Posteromedial thalamic nuclei whisker sensitive areaipsiPoMewss-0.5
Ventral postorior lateral thalamusipsiVPLT1
Paraventricular thalamic nucleus posterior partipsiPVP-0.5
Reuniens thalamic nucleusipsiRe-0.5
Ventral posterior thalamic complexipsiVPT0
Ventral posterolateral thalamic nucleus medial partipsiVPLM1
Ventral posteromedial thalamic nucleus anterior partipsiVPMA1
Intralaminar nucleiipsiILN0
Lateral posterior thalamic nucleusipsiLP3
Laterodorsal thalamic nucleusipsiLD3
Reticular thalamic nucleus intermediate partipsiRti2
Reticular thalamic nucleus rostral partipsiRtr2
Zona incerta caudal partipsiZIC3
Incertotectal fibersipsiict-2
Medial globus pallidusipsiMGP-0.5
Cerebral cortexipsiCEC0
Frontal association cortexipsiFrA0
Temporal association area 3ipsiTe31
Cervical spinal cord layer 7ipsiCSegL7-0.5
Cervical spinal cord layer 8ipsiCSegL8-0.5
Thoracal segments layer 7ipsiTSegL7-0.5
Thoracal segments layer 8ipsiTSegL8-0.5
Peripeduncular areacontraPPA0
Ventrolateral tegmental areacontraVLTg1
Ventrolateral pontine reticular formationcontravlPRF0
Zona incertacontraZI-0.5
Zona incerta caudal partcontraZIC0.5
Stellate ganglionipsiAutoSteG-0.5
Pterygopalatine ganglionipsiAutoPpG-0.5

Input from

NameSideAbbr.WeightDetails
External cortex of the inferior colliculusipsiECIC1
Superior colliculusipsiSC3
Superior colliculus lateral partipsiSCL3
Substantia nigra compact partipsiSNC2
Substantia nigra reticular partipsiSNR1
Substantia nigra reticular part ventral subdivisionipsiSNRv0.5
Peripeduncular areaipsiPPA1
Ventrolateral tegmental areaipsiVLTg1
Pedunculopontine tegmental nucleusipsiPPTg2
Interposed cerebellar nucleiipsiICN1
Lateral cerebellar nucleusipsiCERL1
Ventrolateral pontine reticular formationipsivlPRF2
Subnucleus reticularis dorsalisipsiSRD2
MyelencephalonipsiMYC-0.5
Trigeminal sensory nuclear complexipsiTSNC-0.5
Principal sensory trigeminal nucleusipsiPr53
Spinal trigeminal nucleusipsiSp5nc-0.5
Spinal trigeminal nucleus caudal partipsiSp5C0.5
Spinal trigeminal nucleus interpolar partipsiSp5I3
Lateral vestibular nucleusipsiLVe-0.5
Raphe nucleiipsiRAN2
Dorsal column nucleiipsiDCN2
Cuneate nucleusipsiCu1
Gracile nucleus principal partipsiGr1
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Ventromedial hypothalamic nucleusipsiVMH1
Dorsal part of the lateral geniculate complexipsiLGd1
Parafascicular thalamic nucleusipsiPF2
Posterior groupipsiPTG3
Zona incerta caudal partipsiZIC3
Anterior pretectal nucleusipsiAPT4
Anterior pretectal nucleus caudal partipsiAPTca1.5
Anterior pretectal nucleus rostral partipsiAPTro1.5
RetinaipsiRET0.5
Central amygdaloid nucleusipsiCe1
Globus pallidusipsiGP2
Medial globus pallidusipsiMGP2.5
Cingulate cortexipsiCg3
Cingulate cortex area 2ipsiCg2-0.5
Retrolimbic areaipsiReLA-0.5
Infralimbic cortexipsiIL-0.5
Frontal cortex area 1ipsiFr11
Parietal association cortexipsiPtA1
Parietal cortex posterior areaipsiParP2
Parietal cortex area 1ipsiPar1-0.5
Temporal association area 3ipsiTe31
Lateral agranular prefrontal cortexipsiAGl3
Forelimb motor cortexipsiFMCx1
Medial agranular prefrontal cortexipsiAGm-0.5
Sensory regionsipsiSR3
Primary somatosensory cortexipsiS12
Primary somatosensory cortex forelimb regionipsiS1FL-0.5
Primary somatosensory cortex forelimb region layer 5ipsiS1FL50.5
Primary somatosensory cortex forelimb region layer 6ipsiS1FL60.5
Central dysgranular zone between E4 whisker and forelimb barrel field layers 5ipsiS1BFcdysL53
Central dysgranular zone between E4 whisker and forelimb barrel field layers 6ipsiS1BFcdysL63
Posterior dygranular zone between whisker and trunk representation layer 5ipsiS1pdyL53
Posterior dygranular zone between whisker and trunk representation layer 6ipsiS1pdyL63
Primary visual cortexipsiV11
Cervical segment 3ipsiCS33
Cervical segment 4ipsiCS43
Thoracal segment 5ipsiT50.5
Thoracal segment 6ipsiT60.5
Thoracal segment 7ipsiT70.5
Ventrolateral pontine reticular formationcontravlPRF1
Parvicellular reticular nucleuscontraPCRt2
Principal sensory trigeminal nucleuscontraPr52
Spinal trigeminal nucleus caudal partcontraSp5C3
Spinal trigeminal nucleus interpolar partcontraSp5I2
Spinal trigeminal nucleus oral partcontraSp5O2
Cuneate nucleuscontraCu2
Gracile nucleus principal partcontraGr2
Lateral paragigantocellular nucleuscontraLPGi2
Zona incerta caudal partcontraZIC3
Anterior pretectal nucleus caudal partcontraAPTca0.5
Anterior pretectal nucleus rostral partcontraAPTro0.5
Globus palliduscontraGP0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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