University of Rostock

Department of Anatomy

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Rat connectome



Perirhinal cortex anterior portion left


Abbreviation
PRha
Color       
Superior regionsPerirhinal cortex

SynonymsAbbr.Language
Perirhinal cortex anterior portionPRhaEng
Anterior perirhinal cortexPRCa 

SubregionsSide
Perirhinal cortex anterior portion layer 1left
Perirhinal cortex anterior portion layer 2left
Perirhinal cortex anterior portion layer 3left
Perirhinal cortex anterior portion layer 3 to layer 5left
Perirhinal cortex anterior portion layer 5left
Perirhinal cortex anterior portion layer 5 to layer 6left
Perirhinal cortex anterior portion layer 6left

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Periaqueductal grayipsiPAG-0.5
Substantia nigra compact partipsiSNC-0.5
Dorsal reticular formationipsiDRF1
Parabrachial nucleusipsiPB1
Lateral hypothalamic areaipsiLH1
Suprageniculate thalamic nucleusipsiSG3
Mediodorsal thalamic nucleusipsiMD3
Reuniens thalamic nucleusipsiRe3
Ventral posteromedial thalamic nucleusipsiVPM3
Posterior intralaminar thalamic nucleusipsiPIL3
Posterior groupipsiPTG3
Basolateral amygdaloid nucleusipsiBL3
Basomedial amygdaloid nucleusipsiBM3
Lateral amygdaloid nucleusipsiLA3
Medial amygdaloid nucleusipsiMe3
Accumbens nucleusipsiAc3
Caudate putamenipsiCPu3
Fundus of the striatumipsiFS3
Lateral entorhinal cortexipsiLEnt3
Cingulate cortexipsiCg1
Infralimbic cortexipsiIL3
Frontal cortex area 1 layer 6ipsiFr1L63
Frontal cortex area 1 layer 1ipsiFr1L13
Frontal cortex area 1 layer 2ipsiFr1L23
Frontal cortex area 2ipsiFr20.5
Frontal cortex area 2 layer 3ipsiFr2L33
Frontal cortex area 2 layer 1ipsiFr2L13
Frontal cortex area 2 layer 2ipsiFr2L23
Frontal cortex area 2 layer 6ipsiFr2L63
Frontal cortex area 3 layer 1ipsiFr3L13
Frontal cortex area 3 layer 2ipsiFr3L23
Frontal cortex area 3 layer 6ipsiFr3L63
Parietal cortex area 1 layer 1ipsiPar1L13
Parietal cortex area 1 layer 2ipsiPar1L23
Parietal cortex area 1 layer 6ipsiPar1L63
Parietal cortex area 2 layer 6ipsiPar2L63
Parietal cortex area 2 layer 1ipsiPar2L13
Parietal cortex area 2 layer 2ipsiPar2L23
Temporal association area 3 layer 6ipsiTe3L63
Temporal association area 3 layer 1ipsiTe3L13
Temporal association area 3 layer 2ipsiTe3L23
Temporal association cortex 1 layer 6ipsiTeAL63
Temporal association cortex 1 layer 1ipsiTeAL13
Temporal association cortex 1 layer 2ipsiTeAL23
Agranular insular cortex layer 6ipsiAIL63
Agranular insular cortex layer 1ipsiAIL13
Agranular insular cortex layer 2ipsiAIL23
Agranular insular cortex layer 3ipsiAIL33
Motoric regionsipsiM-0.5
Primary somatosensory cortex forelimb region layer 1ipsiS1FL13
Primary somatosensory cortex forelimb region layer 2ipsiS1FL23
Primary somatosensory cortex forelimb region layer 6ipsiS1FL63
Primary somatosensory cortex hindlimb region layer 1ipsiS1HL13
Primary somatosensory cortex hindlimb region layer 2ipsiS1HL23
Primary somatosensory cortex hindlimb region layer 6ipsiS1HL63
Orbital cortexipsiOrC1
Medial geniculate nucleus dorsal partipsiMGD3
Medial geniculate nucleus medial partipsiMGM3
Anterior olfactory nucleusipsiAON1
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS7-0.5
Cervical segment 8ipsiCS8-0.5
Accumbens nucleuscontraAc1.5
Caudate putamencontraCPu1.5
Fundus of the striatumcontraFS1.5
Cingulate cortexcontraCg0.5
Frontal cortex area 2 layer 3contraFr2L31.5
Frontal cortex area 2 layer 1contraFr2L11.5
Frontal cortex area 2 layer 2contraFr2L21.5
Frontal cortex area 2 layer 6contraFr2L61.5
Parietal cortex area 1 layer 1contraPar1L11.5
Parietal cortex area 1 layer 2contraPar1L21.5
Parietal cortex area 1 layer 6contraPar1L61.5
Parietal cortex area 2 layer 6contraPar2L61.5
Parietal cortex area 2 layer 1contraPar2L11.5
Parietal cortex area 2 layer 2contraPar2L21.5
Agranular insular cortex layer 6contraAIL61.5
Agranular insular cortex layer 1contraAIL11.5
Agranular insular cortex layer 2contraAIL21.5
Agranular insular cortex layer 3contraAIL31.5
Motoric regionscontraM-0.5
Primary somatosensory cortex forelimb region layer 1contraS1FL11.5
Primary somatosensory cortex forelimb region layer 2contraS1FL21.5
Primary somatosensory cortex forelimb region layer 6contraS1FL61.5
Primary somatosensory cortex hindlimb region layer 1contraS1HL11.5
Primary somatosensory cortex hindlimb region layer 2contraS1HL21.5
Primary somatosensory cortex hindlimb region layer 6contraS1HL61.5
Orbital cortexcontraOrC0.5
Anterior olfactory nucleuscontraAON0.5

Input from

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC-0.5
Peripeduncular nucleusipsiPP2
Posterior hypothalamic areaipsiPHA-0.5
Parafascicular thalamic nucleusipsiPF1
Posterior limitans thalamic nucleusipsiPLi2
Posterior thalamic nuclear groupipsiPo-0.5
Suprageniculate thalamic nucleusipsiSG2
Posterior intralaminar thalamic nucleusipsiPIL3
Subparafascicular thalamic nucleusipsiSPF1
Lateral subparafascicular thalamic nucleusipsiSPFL1
Anterior portion of the anterolateral part of the lateral extrastriate cortexipsiVISLaLA3
Medial geniculate nucleus medial partipsiMGM2
Central nucleus of the medial geniculate bodyipsiCMG1
Rostrocaudal extent of the central nucleus of the medial geniculate bodyipsiCMGrc1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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