University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Intermediomedial cell column S1 left


Abbreviation
IMMS1
Color       
Superior regionsSacral segment 1

SynonymsAbbr.Language
Intermediomedial cell column S1IMMS1Eng
Sacral intermediomedial cell column S1  

Output to

NameSideAbbr.WeightDetails
Lateral reticular nucleusipsiLRt-0.5
Lateral hypothalamic areaipsiLH1
Medial division of the hypothalamusipsiMdH1
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL5-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL6-0.5
Lateral reticular nucleuscontraLRt-0.5
Lateral hypothalamic areacontraLH1
Medial division of the hypothalamuscontraMdH1
External anal sphincteripsiExAnSp-0.5
External urethral sphincter muscleipsiMuscEUS-0.5
ClitorisipsiOrgCLi-0.5
Middle layer of the middle portion of the uterine hornipsiOrgUTmLmph-0.5
Corpus cavernosumipsiOrgCC2
Vas deferensipsiOrgVasDef0.5
Seminal vesicleipsiOrgRepSV-10
Urinary bladderipsiOrgUrBLa-0.5
Urinary bladder baseipsiOrgUrBLaB-0.5
Corpus cavernosumcontraOrgCC-0.5
Seminal vesiclecontraOrgRepSV-10

Input from

NameSideAbbr.WeightDetails
Locus coeruleusipsiLC3
Gigantocellular reticular nucleus ventral partipsiGiV-0.5
Raphe obscurus nucleusipsiROb-0.5
Raphe pallidus nucleusipsiRPa-0.5
Lateral hypothalamic areaipsiLH1
Locus coeruleuscontraLC2
Gigantocellular reticular nucleus ventral partcontraGiV-0.5
Frontal association cortexcontraFrA-0.5
Sensory regionscontraSR-0.5
Primary somatosensory cortexcontraS1-0.5
Pelvic ganglionipsiAutoPeG-0.5
Sciatic nerveipsisci-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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