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Rat connectome



Interstitial cell groups right


Abbreviation
CERIc
Color       
Superior regionsCerebellar nuclei

SynonymsAbbr.Language
Interstitial cell groupsCERIcEng
Interstitial cell groupsICGEng
Interstitial cell groups of the cerebellum EngIODrm
 icgEng

SubregionsSide
Rostrocaudal extent of the interstitial cell groupsright
Rostral interstitial cell groupsright

Output to

NameSideAbbr.WeightDetails
Medial longitudinal fasciculuscontramlf-2
Nucleus of DarkschewitschcontraDk1
Red nucleuscontraR-0.5
Red nucleus caudal partcontraRnCa3
Red nucleus ventral partcontraRV-0.5
Edinger Westphal nucleuscontraEW-0.5
Ventral region of the Edinger Westphal nucleuscontraVEW1
Interstitial nucleus of CajalcontraInC-0.5
Cerebellar lobule 2a zone AcontraCERL2aA-0.5
Cerebellar lobule 2b zone AcontraCERL2bA-0.5
Cerebellar lobule 3a zone AcontraCERL3aA-0.5
Cerebellar lobule 3b zone AcontraCERL3bA-0.5
Cerebellar lobule 1 zone AcontraCERL1A-0.5
Cerebellar lobule 4 zone AcontraCERL4A-0.5
Cerebellar lobule 5 zone AcontraCERL5A-0.5
Cerebellar lobule 7a zone AcontraCERL7aA-0.5
Cerebellar lobule 7b zone AcontraCERL7bA-0.5
Cerebellar lobule 8 zone AcontraCERL8A-0.5
Cerebellar lobule 9a zone AcontraCERL9aA-0.5
Cerebellar lobule 9b zone AcontraCERL9bA-0.5
Cerebellar lobule 9c zone AcontraCERL9cA-0.5
Cerebellar lobule 10b zone AcontraCERL10bA-0.5
Cerebellar lobule 10a zone AcontraCERL10aA-0.5
Cerebellar lobule 6a zone AcontraCERL6aA-0.5
Cerebellar lobule 6b zone AcontraCERL6bA-0.5
Cerebellar lobule 6c zone AcontraCERL6cA-0.5
Cerebellar lobule 6d zone AcontraCERL6dA-0.5
Dorsal part of the reticulotegmental nucleus of the ponscontraRtTgD-0.5
Reticulotegmental nucleus of the pons lateral partcontraRtTgL-0.5
Vestibular nucleicontraVnc-0.5
Nucleus YcontraY1
Peripheral part of the superior vestibular nucleuscontraPSuVe-0.5
Medial vestibular nucleuscontraMVe1
Lateral vestibular nucleus dorsal partcontraLVeD3
Inferior vestibular nucleus ventromedial partcontraIVNvm-0.5
X cell group of the vestibular complexcontraXVES1
Inferior olivecontraIO3
Anterior pretectal nucleus ventral partcontraAPTV1
Red nucleus magnocellular partipsiRMC-0.5
Edinger Westphal nucleusipsiEW-0.5
Cerebellar commissureipsicbc-2
Cerebellar lobule 2a zone AipsiCERL2aA-0.5
Cerebellar lobule 2b zone AipsiCERL2bA-0.5
Cerebellar lobule 3a zone AipsiCERL3aA-0.5
Cerebellar lobule 3b zone AipsiCERL3bA-0.5
Cerebellar lobule 1 zone AipsiCERL1A-0.5
Cerebellar lobule 4ipsiCERL4-0.5
Cerebellar lobule 4 zone AipsiCERL4A1
Cerebellar lobule 4 zone XipsiCERL4X1
Cerebellar lobule 5ipsiCERL5-0.5
Cerebellar lobule 5 zone AipsiCERL5A1
Cerebellar lobule 5 zone XipsiCERL5X1
Cerebellar lobule 7a zone AipsiCERL7aA-0.5
Cerebellar lobule 7b zone AipsiCERL7bA-0.5
Cerebellar lobule 8ipsiCERL8-0.5
Cerebellar lobule 8 zone AipsiCERL8A-0.5
Cerebellar lobule 9ipsiCERL9-0.5
Cerebellar lobule 9a zone AipsiCERL9aA1
Cerebellar lobule 9a zone XipsiCERL9aX1
Cerebellar lobule 9b zone AipsiCERL9bA1
Cerebellar lobule 9b zone XipsiCERL9bX1
Cerebellar lobule 9c zone AipsiCERL9cA-0.5
Cerebellar lobule 10ipsiCERL10-0.5
Cerebellar lobule 10b zone AipsiCERL10bA1
Cerebellar lobule 10b zone XipsiCERL10bX1
Cerebellar lobule 10a zone AipsiCERL10aA1
Cerebellar lobule 10a zone XipsiCERL10aX1
Cerebellar lobule 6ipsiCERL6-0.5
Cerebellar lobule 6a zone AipsiCERL6aA1
Cerebellar lobule 6b zone AipsiCERL6bA1
Cerebellar lobule 6c zone AipsiCERL6cA1
Cerebellar lobule 6d zone AipsiCERL6dA-0.5
Anterior interposed nucleusipsiAIN-2
Inferior cerebellar peduncleipsiicp-2
Medial portion of the restiform bodyipsimrb-2
Superior cerebellar peduncleipsisucep-2
Pontine reticular nucleusipsiPRN-0.5
Vestibular nucleiipsiVnc-0.5
Nucleus YipsiY1
Peripheral part of the superior vestibular nucleusipsiPSuVe-0.5
Medial vestibular nucleusipsiMVe1
Lateral vestibular nucleus dorsal partipsiLVeD3
Lateral vestibular nucleus dorsal halfipsiLVeDh-0.5
Inferior vestibular nucleus ventromedial partipsiIVNvm-0.5
Inferior vestibular nucleus lateral halfipsiIVNLh-0.5
Transition zone of medial vestibular nucleus and inferior vestibular nucleusipsiTzMViV-0.5
X cell group of the vestibular complexipsiXVES1
Olivary nucleusipsiON-0.5
Inferior oliveipsiIO-0.5
Inferior olive dorsal nucleusipsiIOD0.5
Inferior olive dorsal nucleus caudal partipsiIODC1
Lateral part of the rostral inferior olive dorsal nucleusipsiIODRL4
Inferior olive medial nucleusipsiIOM3
Lateral part of the inferior olive medial nucleus caudal partipsiIOMcLa2
Lateral part of the intermediate inferior olive medial nucleusipsiIOMimL-0.5

Input from

NameSideAbbr.WeightDetails
Inferior olivecontraIO-0.5
Edinger Westphal nucleusipsiEW-0.5
X-zoneipsiXZO-0.5
Cerebellar lobule 2a zone AipsiCERL2aA-0.5
Cerebellar lobule 2a zone BipsiCERL2aB-0.5
Cerebellar lobule 2a zone XipsiCERL2aX-0.5
Cerebellar lobule 2a zone C1ipsiCERL2aC1-0.5
Cerebellar lobule 2a zone C2ipsiCERL2aC2-0.5
Cerebellar lobule 2a zone C3ipsiCERL2aC3-0.5
Cerebellar lobule 2b zone AipsiCERL2bA-0.5
Cerebellar lobule 2b zone BipsiCERL2bB-0.5
Cerebellar lobule 2b zone XipsiCERL2bX-0.5
Cerebellar lobule 2b zone C1ipsiCERL2bC1-0.5
Cerebellar lobule 2b zone C2ipsiCERL2bC2-0.5
Cerebellar lobule 2b zone C3ipsiCERL2bC3-0.5
Cerebellar lobule 3ipsiCERL3-0.5
Cerebellar lobule 3a zone AipsiCERL3aA-0.5
Cerebellar lobule 3a zone BipsiCERL3aB-0.5
Cerebellar lobule 3a zone XipsiCERL3aX-0.5
Cerebellar lobule 3a zone C1ipsiCERL3aC1-0.5
Cerebellar lobule 3a zone C2ipsiCERL3aC2-0.5
Cerebellar lobule 3a zone C3ipsiCERL3aC3-0.5
Cerebellar lobule 3b zone AipsiCERL3bA-0.5
Cerebellar lobule 3b zone BipsiCERL3bB-0.5
Cerebellar lobule 3b zone XipsiCERL3bX-0.5
Cerebellar lobule 3b zone C1ipsiCERL3bC1-0.5
Cerebellar lobule 3b zone C2ipsiCERL3bC2-0.5
Cerebellar lobule 3b zone C3ipsiCERL3bC3-0.5
Cerebellar lobule 1 zone AipsiCERL1A-0.5
Cerebellar lobule 1 zone BipsiCERL1B-0.5
Cerebellar lobule 1 zone C1ipsiCERL1C1-0.5
Cerebellar lobule 1 zone C2ipsiCERL1C2-0.5
Cerebellar lobule 1 zone C3ipsiCERL1C3-0.5
Cerebellar lobule 1 zone XipsiCERL1X-0.5
Cerebellar lobule 4ipsiCERL4-0.5
Cerebellar lobule 4 zone AipsiCERL4A-0.5
Cerebellar lobule 4 zone BipsiCERL4B-0.5
Cerebellar lobule 4 zone XipsiCERL4X-0.5
Cerebellar lobule 4 zone C1ipsiCERL4C1-0.5
Cerebellar lobule 4 zone C2ipsiCERL4C2-0.5
Cerebellar lobule 4 zone C3ipsiCERL4C3-0.5
Cerebellar lobule 5ipsiCERL5-0.5
Cerebellar lobule 5 zone AipsiCERL5A-0.5
Cerebellar lobule 5 zone BipsiCERL5B-0.5
Cerebellar lobule 5 zone XipsiCERL5X-0.5
Cerebellar lobule 5 zone C1ipsiCERL5C1-0.5
Cerebellar lobule 5 zone C2ipsiCERL5C2-0.5
Cerebellar lobule 5 zone C3ipsiCERL5C3-0.5
Cerebellar lobule 5 layer 2ipsiCERL5L2-0.5
Cerebellar lobule 7a zone AipsiCERL7aA0
Cerebellar lobule 7b zone AipsiCERL7bA0
Cerebellar lobule 8ipsiCERL8-0.5
Cerebellar lobule 8 zone C1ipsiCERL8C11
Cerebellar lobule 8 zone C2ipsiCERL8C21
Cerebellar lobule 8 zone XipsiCERL8X-0.5
Cerebellar lobule 9ipsiCERL9-0.5
Cerebellar lobule 9a zone AipsiCERL9aA0
Cerebellar lobule 9a zone XipsiCERL9aX-0.5
Cerebellar lobule 9b zone XipsiCERL9bX-0.5
Cerebellar lobule 9c zone XipsiCERL9cX-0.5
Cerebellar lobule 10ipsiCERL10-0.5
Cerebellar lobule 10b zone XipsiCERL10bX-0.5
Cerebellar lobule 10a zone XipsiCERL10aX-0.5
Cerebellar lobule 6ipsiCERL6-0.5
Cerebellar lobule 6a zone AipsiCERL6aA-0.5
Cerebellar lobule 6a zone BipsiCERL6aB-0.5
Cerebellar lobule 6a zone XipsiCERL6aX3
Cerebellar lobule 6a zone C1ipsiCERL6aC1-0.5
Cerebellar lobule 6a zone C2ipsiCERL6aC2-0.5
Cerebellar lobule 6a zone C3ipsiCERL6aC3-0.5
Cerebellar lobule 6b zone AipsiCERL6bA-0.5
Cerebellar lobule 6b zone BipsiCERL6bB-0.5
Cerebellar lobule 6b zone C1ipsiCERL6bC1-0.5
Cerebellar lobule 6b zone C2ipsiCERL6bC2-0.5
Cerebellar lobule 6b zone C3ipsiCERL6bC3-0.5
Cerebellar lobule 6b zone XipsiCERL6bX-0.5
Cerebellar lobule 6c zone AipsiCERL6cA-0.5
Cerebellar lobule 6c zone BipsiCERL6cB-0.5
Cerebellar lobule 6c zone C1ipsiCERL6cC1-0.5
Cerebellar lobule 6c zone C2ipsiCERL6cC2-0.5
Cerebellar lobule 6c zone C3ipsiCERL6cC3-0.5
Cerebellar lobule 6c zone XipsiCERL6cX-0.5
Cerebellar lobule 6d zone AipsiCERL6dA-0.5
Cerebellar lobule 6d zone BipsiCERL6dB-0.5
Cerebellar lobule 6d zone XipsiCERL6dX-0.5
Cerebellar cortex x zonesipsiCeZX3
C1-zone of the cerebellar cortexipsiCeZC13
CX-zone of the cerebellar cortexipsiCeZCX-0.5
Cerebellar cortex A zonesipsiCeZoA2
Lateral vestibular nucleus dorsal halfipsiLVeDh-0.5
Inferior vestibular nucleus lateral halfipsiIVNLh-0.5
Transition zone of medial vestibular nucleus and inferior vestibular nucleusipsiTzMViV-0.5
Inferior olive medial nucleus intermediate partipsiIOMim-0.5
Inferior olive medial nucleus central partipsiIOMCe-0.5
Central cervical nucleus C2ipsiCeCvC2-0.5
Central cervical nucleus C3ipsiCeCvC3-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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