University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Intermediate zone S1 right


Abbreviation
izVHS1
Color       
Superior regionsVentral horn S1

SynonymsAbbr.Language
Intermediate zone S1izVHS1Eng

SubregionsSide
Spinal cord layer 7 S1right
Spinal cord layer 8 S1right

Output to

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleuscontraLDTg0
Barringtons nucleuscontraBar0.5
Locus coeruleuscontraLC0.5
Pontine reticular nucleus oral part dorsolateral partcontraPnODL0.5
Lateral hypothalamic areacontraLH3
Medial division of the hypothalamuscontraMdH2
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
ThalamuscontraT-0.5
Lateral funiculuscontralf-2
Laterodorsal tegmental nucleusipsiLDTg0
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC1
Reticulotegmental nucleusipsiRETn-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus oral part dorsolateral partipsiPnODL1
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Dorsal column nucleiipsiDCN2
Lateral hypothalamic areaipsiLH1.5
Medial division of the hypothalamusipsiMdH2
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Suprachiasmatic nucleusipsiSCh0.5
Supraoptic nucleus [Supraoptic region]ipsiSO0.5
Adductor caudae dorsalis musclecontraMuscAdCaDo1
Adductor caudae dorsalis muscleipsiMuscAdCaDo1

Input from

NameSideAbbr.WeightDetails
Locus coeruleuscontraLC0.5
Central gray pons dorsolateral partipsiCGPdl2
Locus coeruleusipsiLC3
Locus coeruleus caudal partipsiLCca-0.5
Locus coeruleus ventral partipsiLCv-0.5
Reticulotegmental nucleusipsiRETn-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Raphe magnus nucleusipsiRMg3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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