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Rat connectome
Thalamus left
Abbreviation
T
Color
Superior regions
Diencephalon
Synonyms
Abbr.
Language
TH
Subnuclei of thalamus
Thalamus
T
Eng
Nuclei thalamus
Eng
Subregions
Side
Acoustic thalamic nuclei
left
Angular thalamic nucleus
left
Caudal thalamus
left
Dorsal thalamus
left
Ethmoid thalamic nucleus
left
External medullary lamina
left
Intermedioventral thalamic commissure
left
Internal medullary lamina
left
Interoanteroventral thalamic nucleus
left
Intralaminar nuclei
left
Intramedullary thalamic area
left
Lateral thalamic nuclear group
left
Medial thalamic zone
left
Mediolateral thalamic nucleus
left
Nucleus of the stria medullaris
left
Oval paracentral thalamic nucleus
left
Paraxiphoid nucleus of thalamus
left
Posterior group
left
Posterior parathalamic nuclei
left
Posteromedian thalamic nucleus
left
Rostral thalamus
left
Rostrocaudal thalamic nucleus
left
Scaphoid thalamic nucleus
left
Supraoculomotor periaqueductal gray
left
Ventral reuniens thalamic nucleus
left
Ventral thalamus
left
Xiphoid thalamic nucleus
left
Perifascicular thalamic nucleus
left
Axial thalamic nucleus
left
Paralamellar thalamic nucleus
left
Nucleus gelantinosus thalami
left
Massa intermedia of the thalamus
left
Thalamic relay cell
left
Midbrain thalamic nucleus
left
Output to
Name
Side
Abbr.
Weight
Details
Central grey rostral area
ipsi
rCG
0
Dorsal periaqueductal gray
ipsi
DPAG
-0.5
Lateral periaqueductal gray
ipsi
LPAG
-0.5
Periaqueductal gray medial part
ipsi
PAGm
-0.5
Periaqueductal gray rostrolateral part
ipsi
PAGRL
3
Ventral periaqueductal gray
ipsi
VPAG
-0.5
Central nucleus of the inferior colliculus
ipsi
CIC
0
Superior colliculus
ipsi
SC
-0.5
Superior colliculus deep layers
ipsi
SCd
-0.5
Tegmental area
ipsi
TGA
0
Peduncularpontine nucleus
ipsi
PPN
-0.5
Substantia nigra A9
ipsi
SN
2
Substantia nigra compact part
ipsi
SNC
-3
Substantia nigra lateral part
ipsi
SNL
0
Substantia nigra reticular part
ipsi
SNR
-0.5
Ventral tegmental area A10
ipsi
VTA
0
Lateral tegmental area
ipsi
LTGA
-0.5
Lateral tegmental nucleus
ipsi
LTN
0
Ventral tegmental nucleus
ipsi
VTg
0
Dorsal tegmental nucleus
ipsi
DTg
0
Cerebellar hemisphere
ipsi
CEREBH
-0.5
Pons
ipsi
P
-2
Pontine gray
ipsi
PG
-0.5
Caudal reticular formation
ipsi
CRF
3
Mesencephalic reticular formation
ipsi
MRF
-0.5
Parabrachial nucleus
ipsi
PB
-0.5
Raphe nuclei
ipsi
RAN
0
Dorsal raphe nucleus
ipsi
DR
0
Median raphe nucleus
ipsi
MnR
0
Prosencephalon
ipsi
PRC
-0.5
Medial septal nucleus
ipsi
MS
1
Medial preoptic area
ipsi
MPA
1
Dorsomedial hypothalamic nucleus
ipsi
DMHy
0
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
-0.5
Ventromedial hypothalamic nucleus
ipsi
VMH
0
Nucleus paraventricularis [Periventricular zone anterior region]
ipsi
PaPAR
1
Paraventricular hypothalamic nucleus medial parvocellular part
ipsi
MPPa
2
Paraventricular hypothalamic nucleus
ipsi
Pa
0.5
Anterodorsal thalamic nucleus
ipsi
AD
-0.5
Anteromedial thalamic nucleus
ipsi
AM
-0.5
Anteroventral thalamic nucleus
ipsi
AV
-0.5
Mediodorsal thalamic nucleus
ipsi
MD
3
Paratenial thalamic nucleus
ipsi
PT
-0.5
Reuniens thalamic nucleus
ipsi
Re
-0.5
Medial thalamic zone
ipsi
MTZ
-0.5
Reticular thalamic nucleus
ipsi
Rt
3
Reticular thalamic nucleus caudal part
ipsi
Rtc
3
Reticular thalamic nucleus rostral part
ipsi
Rtr
3
Basolateral amygdaloid nucleus
ipsi
BL
-0.5
Bed nucleus of the stria terminalis lateral division ventral part
ipsi
BSTLV
-0.5
Caudal part of the capsule like area surrounding central amygdaloid nucleus
ipsi
CecC
0
Central amygdaloid nucleus lateral division
ipsi
CeL
0
Central amygdaloid nucleus medial division
ipsi
CeM
-0.5
Cortical amygdaloid nucleus
ipsi
CAn
0.5
Medial amygdaloid nucleus
ipsi
Me
3
Medial amygdaloid nucleus anterior part
ipsi
MeAn
1
Medial amygdaloid nucleus posterior part
ipsi
MePo
2
Globus pallidus
ipsi
GP
0.5
Ventral pallidum
ipsi
VP
-0.5
Globus pallidus rostrocaudal middle
ipsi
GPrcm
0.5
Striatum
ipsi
STR
4
Accumbens nucleus
ipsi
Ac
2
Caudate putamen
ipsi
CPu
4
Medial striatum
ipsi
CPum
0.5
Dorsal striatum
ipsi
CPud
-0.5
Ventral striatum
ipsi
CPuv
-0.5
Cerebral cortex
ipsi
CEC
-0.5
Hippocampus
ipsi
HIPP
0.5
Dorsal hippocampus
ipsi
HIPPd
-0.5
Field CA1 of hippocampus
ipsi
CA1
-0.5
Prepiriform cortex
ipsi
PRPIR
0
Retrosplenial ventral part
ipsi
RSPv
2
Retrosplenial agranular cortex
ipsi
RSA
-0.5
Retrosplenial granular a cortex layer 1
ipsi
RSGa1
-0.5
Retrosplenial granular a cortex layer 3
ipsi
RSGa3
-0.5
Retrosplenial granular a cortex layer 4
ipsi
RSGa4
-0.5
Cingulate cortex
ipsi
Cg
-0.5
Anterior cingulate cortex
ipsi
ACC
-0.5
Dorsal anterior cingulate cortex
ipsi
DACC
-0.5
Rostral part of dorsal anterior cingulate cortex
ipsi
DACCR
-0.5
Lateral cingulate cortex
ipsi
LCg
3
Medial cingulate cortex
ipsi
MCg
3
Middle cingulate cortex
ipsi
MCC
-0.5
Posterior cingulate cortex
ipsi
PCC
-0.5
Prelimbic cortex
ipsi
PrL
-0.5
Prelimbic cortex caudal part
ipsi
PrLc
-0.5
Neocortex
ipsi
NEOCX
4
Parietal association cortex layer 1
ipsi
ParPLa1
1.5
Parietal association cortex layer 2
ipsi
ParPLa2
1.5
Temporal association area 2 dorsal part
ipsi
Te2D
3
Temporal cortex layer 1
ipsi
TELaL1
1.5
Temporal cortex layer 2
ipsi
TELaL2
1.5
Auditory regions
ipsi
AU
-0.5
Auditory regions layer 4
ipsi
AUL4
3
Insular cortex
ipsi
ICX
-3
Prefrontal cortex
ipsi
PFC
-0.5
Prefrontal cortex layer 3
ipsi
PFCL3
3
Prefrontal cortex layer 6
ipsi
PFCL6
3
Somatomotoric regions
ipsi
SMR
3
Motoric regions
ipsi
M
-0.5
Lateral agranular prefrontal cortex
ipsi
AGl
-0.5
Forelimb motor cortex
ipsi
FMCx
3
Caudal forelimb motor area
ipsi
CFMA
-0.5
Shoulder retraction motor cortex
ipsi
SRMCx
-1
Rostral forelimb motor area
ipsi
RFMA
-0.5
Lateral agranular prefrontal cortex layer 5
ipsi
AGlL5
3
Lateral agranular prefrontal cortex layer 6b
ipsi
AGlL6b
3
Jaw movement motor cortex
ipsi
JMCx
-0.5
Whiskers motor cortex
ipsi
WMCx
-0.5
Sensory regions
ipsi
SR
-0.5
Anterolateral somatosensory cortex layer 4
ipsi
ALSRL4
3
Anteroposterior extent of the anterolateral somatosensory cortex layer 4
ipsi
APALSRL4
-0.5
Mediolateral extent of the anterolateral somatosensory cortex
ipsi
ALSRML
-0.5
Primary somatosensory cortex
ipsi
S1
3
Anteroposterior part of the posterolateral region of the primary somatosensory cortex barrel field layer 4
ipsi
APPLS1BFL4
-0.5
Mediolateral extent of the posterolateral region of the primary somatosensory cortex barrel field layer 4
ipsi
MLPLS1BFL4
-0.5
Posterolateral region of the primary somatosensory cortex barrel field layer 4
ipsi
PLS1BFL4
1.5
Posteromedial barrel subfield
ipsi
PMBSF
-0.5
Posteromedial barrel subfield vibrissae row D
ipsi
PMBSFD
-0.5
Primary somatosensory cortex layer 4
ipsi
S1L4
3
Primary somatosensory cortex layer 1
ipsi
S1L1
-0.5
Secondary somatosensory cortex
ipsi
S2
-0.5
Secondary somatosensory cortex layer 4
ipsi
S2L4
3
Somatosensory cortex layer 2
ipsi
SRL2
1
Somatosensory cortex layer 3
ipsi
SRL3
1.5
Somatosensory cortex layer 4
ipsi
SRL4
3
Somatosensory cortex layer 5b
ipsi
SRL5b
1
Somatosensory cortex layer 6
ipsi
SRL6
1.5
Somatomotoric regions layer 3
ipsi
SMRL3
-0.5
Somatomotoric regions layer 4
ipsi
SMRL4
-0.5
Visual regions
ipsi
VR
3
Primary visual cortex
ipsi
V1
3
Visual regions layer 1
ipsi
VRL1
1.5
Visual regions layer 2
ipsi
VRL2
1.5
Visual regions layer 4
ipsi
VRL4
3
Primary visual cortex monocular area
ipsi
V1M
-0.5
Anterior medial frontal cortex
ipsi
AMFC
-0.5
Neocortex layer 4
ipsi
NEOCXL4
-0.5
Neocortex layers 5-6
ipsi
NEOCXL56
-0.5
Lateral geniculate complex
ipsi
LG
4
Medial geniculate nucleus
ipsi
MG
4
Rostroventral part of the apical interpeduncular nucleus
ipsi
IPArv
-0.5
Interpeduncular nucleus caudal subnucleus
ipsi
IPC
-0.5
Interpeduncular nucleus central subnucleus
ipsi
IPRc
-0.5
Interpeduncular nucleus intermediate subnucleus
ipsi
IPI
-0.5
Interpeduncular nucleus lateral subnucleus caudal part
ipsi
IPLc
-0.5
Caudalmost part of the rostral interpeduncular nucleus
ipsi
IPRcm
-0.5
Olfactory tubercle polymorph layer
ipsi
TuOpo
-0.5
Lateral septal nucleus caudal part
ipsi
LSc
-0.5
Central nucleus of the inferior colliculus
contra
CIC
0
Ventral tegmental area A10
contra
VTA
0
Lateral tegmental nucleus
contra
LTN
0
Ventral tegmental nucleus
contra
VTg
0
Dorsal tegmental nucleus
contra
DTg
0
Cerebellar hemisphere
contra
CEREBH
-0.5
Raphe nuclei
contra
RAN
0
Dorsal raphe nucleus
contra
DR
0
Median raphe nucleus
contra
MnR
0
Rostral part of claustrum
contra
RCl
0
Striatum
contra
STR
4
Anteriorposterior part of caudate putamen
contra
CPuAP
0
Neocortex
contra
NEOCX
4
Auditory regions
contra
AU
-0.5
Prefrontal cortex
contra
PFC
-0.5
Lateral agranular prefrontal cortex
contra
AGl
-0.5
Caudal part of lateral agranular prefrontal cortex
contra
AGlc
0
Forelimb motor cortex
contra
FMCx
0
Hindlimb motor cortex
contra
HMCx
0
Jaw movement motor cortex
contra
JMCx
1
Visual regions
contra
VR
0
Anterior medial frontal cortex
contra
AMFC
-0.5
Lateral geniculate complex
contra
LG
1
Medial geniculate nucleus
contra
MG
1
Bulbospongiosus muscle
ipsi
Muscbsp
1
Bulbospongiosus muscle
contra
Muscbsp
1
Input from
Name
Side
Abbr.
Weight
Details
Paralemniscal nucleus
ipsi
PL
-0.5
Periaqueductal gray lateroventral part
ipsi
PAGLV
1
Red nucleus caudal part
ipsi
RnCa
0
Red nucleus rostral part
ipsi
RnRo
0
Superior colliculus
ipsi
SC
-0.5
Superior colliculus lateral part
ipsi
SCL
3
Peduncularpontine nucleus
ipsi
PPN
-0.5
Substantia nigra A9
ipsi
SN
0.5
Substantia nigra compact part
ipsi
SNC
1
Substantia nigra medial part
ipsi
SNM
-0.5
Substantia nigra reticular part
ipsi
SNR
2
Substantia nigra reticular part ventrolateral tier
ipsi
SNRVL
3
Ventral tegmental area A10
ipsi
VTA
1
Laterodorsal tegmental nucleus
ipsi
LDTg
3
Pedunculopontine tegmental nucleus
ipsi
PPTg
3
Dorsolateral pedunculopontine tegmental nucleus
ipsi
PPTgDL
3
Cerebellar nuclei
ipsi
DCeN
1
Locus coeruleus
ipsi
LC
2
Locus coeruleus anterior part
ipsi
LCa
0
Intermediate part of the anterior pole of the locus coeruleus
ipsi
LCimap
1
Dorsal part of the anterior pole of the locus coeruleus
ipsi
LCda
1
Locus coeruleus dorsal half of the compact part
ipsi
LCcDhC
3
Locus coeruleus core
ipsi
LCco
0.5
Locus coeruleus dorsal part
ipsi
LCD
3
Locus coeruleus dorsal edge
ipsi
LCDe
3
Locus coeruleus posterior part
ipsi
LCp
3
Ventral part of the posterior pole of the locus coeruleus
ipsi
LCvp
0
Intermediate part of the posterior pole of the locus coeruleus
ipsi
LCip
3
Dorsal part of the posterior pole of the locus coeruleus
ipsi
LCdp
3
Locus coeruleus ventral part
ipsi
LCv
3
Extreme ventral part of the locus coeruleus
ipsi
LCev
0
Locus coeruleus ventromedial part
ipsi
VMLC
0
Pons oral part
ipsi
Por
-1
Mesencephalic reticular formation
ipsi
MRF
0.5
Parabrachial nucleus
ipsi
PB
-0.5
Koelliker Fuse nucleus
ipsi
KF
2
Lateral parabrachial nucleus external part
ipsi
LPBE
2.5
Lateral parabrachial nucleus internal part
ipsi
LPBI
-0.5
Medial parabrachial nucleus external part
ipsi
MPBE
2
Medial parabrachial nucleus medial division
ipsi
MPBM
2
Parvicellular reticular nucleus
ipsi
PCRt
-0.5
Subcoeruleus nucleus
ipsi
SubC
0
Paratrigeminal nucleus
ipsi
Pa5
1
Principal sensory trigeminal nucleus
ipsi
Pr5
1
Principal sensory trigeminal nucleus dorsal part
ipsi
Pr5D
0
Spinal trigeminal nucleus
ipsi
Sp5nc
-0.5
Spinal trigeminal nucleus caudal part
ipsi
Sp5C
1
Ventrolateral part of the spinal trigeminal nucleus caudal part
ipsi
Sp5CvL
1
Dorsal regions of the ventrolateral part of the spinal trigeminal nucleus caudal part
ipsi
Sp5CvLD
-0.5
Ventrolateral aspect of the caudal transition zone with the ventrolateral part of the spinal trigeminal nucleus caudal part
ipsi
Sp5CvLct
0
Spinal trigeminal nucleus interpolar part
ipsi
Sp5I
3
Spinal trigeminal nucleus interpolar part ventrolateral part
ipsi
Sp5IVL
-0.5
Spinal trigeminal nucleus oral part
ipsi
Sp5O
1
Rostral transition zone with the spinal trigeminal nucleus interpolaris of the ventrolateral Sp5C
ipsi
Sp5nctzi
-0.5
Trigeminal subnucleus caudalis
ipsi
5SSC
0.5
Ventrolateral of the trigeminal subnucleus caudalis
ipsi
5SSCVL
-0.5
Trigeminal subnucleus caudalis superficial layers
ipsi
5SSCsL
0.5
Trigeminal subnucleus caudalis superficial layers marginal zone
ipsi
5SSCsLmz
0.5
Trigeminal subnucleus caudalis superficial layers substantia gelatinosa
ipsi
5SSCGL
0.5
Trigeminal subnucleus caudalis superficial layers magnocellular portion
ipsi
5SSCsLm
0.5
Spinal vestibular nucleus
ipsi
SpVe
3
Nucleus of the solitary tract
ipsi
Sol
-0.5
Dorsal raphe nucleus
ipsi
DR
-0.5
Dorsal raphe nucleus dorsomedial subdivision
ipsi
DRdm
-0.5
Raphe pallidus nucleus
ipsi
RPa
0.5
Dorsal column nuclei
ipsi
DCN
-0.5
Cuneate nucleus
ipsi
Cu
3
Gracile
ipsi
Gra
3
Olivary pretectal nucleus
ipsi
OPT
-2
Basal forebrain
ipsi
BAF
2
Median eminence
ipsi
ME
-0.5
Lamina terminalis
ipsi
LTer
-3
Nucleus of the horizontal limb of the diagonal band
ipsi
HDB
1.5
Medial septal nucleus
ipsi
MS
1
Basal nucleus Meynert
ipsi
B
1.5
Basal nucleus Meynert caudal part
ipsi
Bca
1.5
Substantia innominata
ipsi
SI
1.5
Dorsomedial hypothalamic nucleus
ipsi
DMHy
-2
Medial zone
ipsi
MHA
-0.5
Anterior hypothalamic area posterior part
ipsi
AHAP
-2
Ventromedial hypothalamic nucleus
ipsi
VMH
-2
Ventromedial hypothalamic nucleus anterior part
ipsi
VMHA
-2
Ventromedial hypothalamic nucleus dorsomedial part
ipsi
VMHDM
0.5
Ventromedial hypothalamic nucleus posterior part
ipsi
VMHP
-2
Ventromedial hypothalamic nucleus ventrolateral part
ipsi
VMHVL
-0.5
Mammillary body
ipsi
CMAM
3
Lateral mammillary nucleus
ipsi
LM
-0.5
Medial mammillary nucleus median part
ipsi
MMnm
3
Premammillary nucleus dorsal part
ipsi
PMD
-2
Premammillary nucleus ventral part
ipsi
PMV
-2
A11 dopamine cells
ipsi
A11
0.5
A8 dopamine cells retrorubral group
ipsi
RRF
1
Central medial thalamic nucleus caudal part
ipsi
CMca
0.5
Centrolateral thalamic nucleus
ipsi
CL
0
Paracentral thalamic nucleus
ipsi
PC
-0.5
Parafascicular thalamic nucleus
ipsi
PF
0
Ventrolateral thalamic nucleus
ipsi
VL
-0.5
Ventromedial thalamic nucleus dorsal part
ipsi
VMTd
-0.5
Reticular thalamic nucleus
ipsi
Rt
1
Zona incerta medial part
ipsi
ZIm
3
Retina
ipsi
RET
-0.5
Retinal ganglion cells in the ventrotemporal region
ipsi
RETgvt
-0.5
Internal capsule
ipsi
ic
-2
Basal nucleus
ipsi
Bnc
2.5
Bed nucleus of the stria terminalis
ipsi
BST
1
Globus pallidus
ipsi
GP
3
Dorsal globus pallidus
ipsi
DGP
-0.5
Lateral globus pallidus
ipsi
LGP
-0.5
Ventral pallidum
ipsi
VP
2
Accumbens nucleus
ipsi
Ac
-0.5
Caudate putamen
ipsi
CPu
1
Medial striatum
ipsi
CPum
-0.5
Rostrocaudal extrent of the medial striatum
ipsi
CPumRC
-0.5
Caudate putamen tail
ipsi
CPuT
0
Subthalamic nucleus
ipsi
STh
0.5
Parasubthalamic nucleus
ipsi
PSTh
1
Subthalamic nucleus medial part
ipsi
SThM
1
Subthalamic nucleus medial cap
ipsi
SThMc
1
Hippocampus
ipsi
HIPP
2
Dorsal hippocampus
ipsi
HIPPd
3
Field CA1 of hippocampus medial part
ipsi
CA1m
-0.5
Subiculum ventral part
ipsi
Sv
-0.5
Ventral subiculum rostral part layers
ipsi
SvRL
3
Fornix
ipsi
f
3
Parahippocampal region
ipsi
PHR
1
Retrosplenial agranular cortex layer 4
ipsi
RSAL4
-0.5
Retrosplenial agranular cortex layer 5
ipsi
RSAL5
-0.5
Retrosplenial agranular cortex layer 6
ipsi
RSAL6
-0.5
Retrosplenial agranular cortex layer 1
ipsi
RSAL1
-0.5
Retrosplenial agranular cortex layer 2
ipsi
RSAL2
-0.5
Retrosplenial agranular cortex layer 3
ipsi
RSAL3
-0.5
Retrosplenial dysgranular cortex layer 6
ipsi
RSdysL6
-0.5
Retrosplenial granular b cortex layer 6
ipsi
RSGb6
-0.5
Retrosplenial granular cortex layer 5
ipsi
RSGL5
-0.5
Retrosplenial granular cortex layer 6
ipsi
RSGL6
-0.5
Retrosplenial granular cortex layer 1
ipsi
RSGL1
-0.5
Retrosplenial granular cortex layer 2
ipsi
RSGL2
-0.5
Retrosplenial granular cortex layer 3
ipsi
RSGL3
-0.5
Retrosplenial granular cortex layer 4
ipsi
RSGL4
-0.5
White matter of the retrosplenial granular cortex
ipsi
RSGraWM
-0.5
Cerebral cortex layer 5
ipsi
CCL5
3
Cerebral cortex layer 6
ipsi
CCL6
3
Cingulate cortex
ipsi
Cg
3
Anterior cingulate cortex layer 6a intestitial neurons
ipsi
ACCL6ai
-0.5
Anterior cingulate cortex layer 6b interstitial neurons
ipsi
ACCL6bi
-0.5
Cingulate cortex area 3 layer 5
ipsi
Cg3L5
1
Lateral cingulate cortex
ipsi
LCg
3
Medial cingulate cortex
ipsi
MCg
3
Posterior cingulate cortex
ipsi
PCC
2
Posterior cingulate cortex layer 6a interstitial neurons
ipsi
PCCL6ai
-0.5
Posterior cingulate cortex layer 6b interstitial neurons
ipsi
PCCL6bi
-0.5
Posterior cingulate cortex granular part
ipsi
PCCg
2
Posterior cingulate cortex agranular part
ipsi
PCCag
2
Cingulate cortex agranular part
ipsi
Cgag
3
Prelimbic cortex
ipsi
PrL
-0.5
Prelimbic cortex dorsal part layer 5
ipsi
PrLdL5
-0.5
Infralimbic cortex
ipsi
IL
-0.5
Frontal association cortex
ipsi
FrA
-0.5
Frontal association cortex layer 6
ipsi
FrALL6
3
Frontal association cortex layer 6a interstitial neurons
ipsi
FrALL6ai
-0.5
Frontal association cortex layer 6b interstitial neurons
ipsi
FrALL6bi
-0.5
Frontal cortex area 2 rostral part
ipsi
Fr2R
3
Parietal association cortex
ipsi
PtA
-0.5
Parietal association cortex layer 3
ipsi
ParPLa3
0.5
Parietal association cortex layer 4
ipsi
ParPLa4
0.5
Parietal association cortex layer 5
ipsi
ParPLa5
0.5
Parietal association cortex layer 6
ipsi
ParPLa6
3
Parietal association cortex layer 6a interstitial neurons
ipsi
ParPLa6ai
-0.5
Parietal association cortex layer 6b interstitial neurons
ipsi
ParPLa6bi
-0.5
Parietal association cortex layer 1
ipsi
ParPLa1
0
Parietal association cortex layer 2
ipsi
ParPLa2
0.5
Parietal cortex area 1 caudal part
ipsi
Par1c
3
Temporal cortex
ipsi
TE
1
Perirhinal cortex
ipsi
A35
1
Prefrontal cortex
ipsi
PFC
-0.5
Somatomotoric regions
ipsi
SMR
3
Motoric regions
ipsi
M
1
Lateral prefrontal cortex
ipsi
lPFC
3
Lateral agranular prefrontal cortex
ipsi
AGl
3
Lateral agranular prefrontal cortex layer 5
ipsi
AGlL5
2
Lateral agranular prefrontal cortex layer 6
ipsi
AGlL6
2
Jaw movement motor cortex
ipsi
JMCx
-0.5
Whiskers motor cortex
ipsi
WMCx
3
Medial prefrontal cortex
ipsi
mPFC
3
Medial prefrontal cortex layer 5
ipsi
mPFCL5
1.5
Medial prefrontal cortex layer 6
ipsi
mPFCL6
3
Medial agranular prefrontal cortex
ipsi
AGm
4
Medial agranular prefrontal cortex layer 5 b
ipsi
AGmL5b
-0.5
Medial agranular prefrontal cortex layer 6
ipsi
AGmL6
-0.5
Sensory regions
ipsi
SR
4
Primary somatosensory cortex
ipsi
S1
2
Primary somatosensory cortex barrel field
ipsi
S1BF
-0.5
Posteromedial barrel subfield vibrissae row D
ipsi
PMBSFD
-0.5
Primary somatosensory cortex barrel field layer 5
ipsi
S1BF5
-0.5
Primary somatosensory cortex barrel field layer 6
ipsi
S1BF6
3
Secondary somatosensory cortex
ipsi
S2
2
Secondary somatosensory cortex layer 5
ipsi
S2L5
2
Secondary somatosensory cortex layer 6
ipsi
S2L6
2
Somatomotoric regions layer 2
ipsi
SMRL2
3
Somatomotoric regions layer 3
ipsi
SMRL3
3
Visual regions
ipsi
VR
3
Primary visual cortex layer 6
ipsi
V1L6
3
Lateromedial part of the lateral extrastriate cortex layer 6
ipsi
VISLLML6
-0.5
Ventrolateral orbital area
ipsi
VLO
-0.5
Posterior commissure
ipsi
pc
-0.5
Precommissural nucleus
ipsi
PrC
-2
Lateral geniculate complex
ipsi
LG
-0.5
Septal region
ipsi
SER
3
Lateral septal nucleus caudal part
ipsi
LSc
-0.5
Lateral septal nucleus rostral part dorsolateral zone
ipsi
LSrdl
1
Septofimbrial nucleus
ipsi
SFi
1
Ependymocytes of 4th ventricle
ipsi
4Vepc
-0.5
Lateral spinal nucleus
ipsi
MESLn
1
Prebrachial segments
ipsi
PSeg
0.5
Intermediomedial cell column C1
ipsi
IMMC1
3
Internal basilar nucleus C1
ipsi
IBC1
3
Spinal cord layers C1
ipsi
SCLC1
0
Spinal cord layer 3 C1
ipsi
SCL3C1
0.5
Spinal cord layer 1 C1
ipsi
SCL1C1
0.5
Spinal cord layer 2 C1
ipsi
SCL2C1
0.5
Ventral horn C1
ipsi
VHC1
3
Intermediomedial cell column C2
ipsi
IMMC2
3
Internal basilar nucleus C2
ipsi
IBC2
3
Spinal cord layers C2
ipsi
SCLC2
0
Spinal cord layer 3 C2
ipsi
SCL3C2
0.5
Spinal cord layer 1 C2
ipsi
SCL1C2
0.5
Spinal cord layer 2 C2
ipsi
SCL2C2
0.5
Ventral horn C2
ipsi
VHC2
3
Internal basilar nucleus C3
ipsi
IBC3
3
Spinal cord layers C3
ipsi
SCLC3
0
Spinal cord layer 3 C3
ipsi
SCL3C3
0.5
Spinal cord layer 1 C3
ipsi
SCL1C3
0.5
Spinal cord layer 2 C3
ipsi
SCL2C3
0.5
Spinal cord layers C4
ipsi
SCLC4
0
Spinal cord layer 3 C4
ipsi
SCL3C4
0.5
Spinal cord layer 1 C4
ipsi
SCL1C4
0.5
Spinal cord layer 2 C4
ipsi
SCL2C4
0.5
Spinal cord layers C5
ipsi
SCLC5
0
Spinal cord layer 3 C5
ipsi
SCL3C5
0.5
Spinal cord layer 1 C5
ipsi
SCL1C5
0.5
Spinal cord layer 2 C5
ipsi
SCL2C5
0.5
Spinal cord layers C6
ipsi
SCLC6
0
Spinal cord layer 3 C6
ipsi
SCL3C6
0.5
Spinal cord layer 1 C6
ipsi
SCL1C6
0.5
Spinal cord layer 2 C6
ipsi
SCL2C6
0.5
Spinal cord layers C7
ipsi
SCLC7
0
Spinal cord layer 3 C7
ipsi
SCL3C7
0.5
Spinal cord layer 1 C7
ipsi
SCL1C7
0.5
Spinal cord layer 2 C7
ipsi
SCL2C7
0.5
Spinal cord layer 3 C8
ipsi
SCL3C8
0.5
Spinal cord layer 1 C8
ipsi
SCL1C8
0.5
Spinal cord layer 2 C8
ipsi
SCL2C8
0.5
Cervical enlargement
ipsi
CSegE
0.5
Cervical spinal cord layer 5
ipsi
CSegL5
0.5
Cervical spinal cord layer 7
ipsi
CSegL7
0.5
Spinal cord layer 3 T1
ipsi
SCL3T1
0.5
Spinal cord layer 1 T1
ipsi
SCL1T1
0.5
Spinal cord layer 2 T1
ipsi
SCL2T1
0.5
Spinal cord layer 3 T2
ipsi
SCL3T2
0.5
Spinal cord layer 1 T2
ipsi
SCL1T2
0.5
Spinal cord layer 2 T2
ipsi
SCL2T2
0.5
Spinal cord layer 3 T3
ipsi
SCL3T3
0.5
Spinal cord layer 1 T3
ipsi
SCL1T3
0.5
Spinal cord layer 2 T3
ipsi
SCL2T3
0.5
Spinal cord layer 3 T4
ipsi
SCL3T4
0.5
Spinal cord layer 1 T4
ipsi
SCL1T4
0.5
Spinal cord layer 2 T4
ipsi
SCL2T4
0.5
Spinal cord layer 3 T5
ipsi
SCL3T5
0.5
Spinal cord layer 1 T5
ipsi
SCL1T5
0.5
Spinal cord layer 2 T5
ipsi
SCL2T5
0.5
Spinal cord layer 3 T6
ipsi
SCL3T6
0.5
Spinal cord layer 1 T6
ipsi
SCL1T6
0.5
Spinal cord layer 2 T6
ipsi
SCL2T6
0.5
Spinal cord layer 3 T7
ipsi
SCL3T7
0.5
Spinal cord layer 1 T7
ipsi
SCL1T7
0.5
Spinal cord layer 2 T7
ipsi
SCL2T7
0.5
Spinal cord layer 3 T8
ipsi
SCL3T8
0.5
Spinal cord layer 1 T8
ipsi
SCL1T8
0.5
Spinal cord layer 2 T8
ipsi
SCL2T8
0.5
Spinal cord layer 3 T9
ipsi
SCL3T9
0.5
Spinal cord layer 1 T9
ipsi
SCL1T9
0.5
Spinal cord layer 2 T9
ipsi
SCL2T9
0.5
Spinal cord layer 3 T10
ipsi
SCL3T10
0.5
Spinal cord layer 1 T10
ipsi
SCL1T10
0.5
Spinal cord layer 2 T10
ipsi
SCL2T10
0.5
Spinal cord layer 3 T11
ipsi
SCL3T11
0.5
Spinal cord layer 1 T11
ipsi
SCL1T11
0.5
Spinal cord layer 2 T11
ipsi
SCL2T11
0.5
Spinal cord layer 3 T12
ipsi
SCL3T12
0.5
Spinal cord layer 1 T12
ipsi
SCL1T12
0.5
Spinal cord layer 2 T12
ipsi
SCL2T12
0.5
Spinal cord layer 3 T13
ipsi
SCL3T13
0.5
Spinal cord layer 1 T13
ipsi
SCL1T13
0.5
Spinal cord layer 2 T13
ipsi
SCL2T13
0.5
Lumbar segments
ipsi
LSeg
0.5
Intermediomedial cell column L1
ipsi
IMML1
1
Lateral spinal nucleus L1
ipsi
LSpL1
2
Spinal cord layers L1
ipsi
SCLL1
2
Area X L1
ipsi
SCL10L1
3
Spinal cord layer 5 L1
ipsi
SCL5L1
1
Spinal cord layer 3 L1
ipsi
SCL3L1
0.5
Superficial dorsal horn L1
ipsi
SDHL1
0.5
Spinal cord layer 1 L1
ipsi
SCL1L1
0.5
Spinal cord layer 2 L1
ipsi
SCL2L1
1
Spinal cord layer 2 outer part L1
ipsi
SCL2opL1
-0.5
Reticular part of neck of dorsal horn L1
ipsi
rDHL1
-0.5
Lateral reticular part of neck of dorsal horn L1
ipsi
LrDHL1
-0.5
Medial part of neck of dorsal horn L1
ipsi
DHL1mn
1
Spinal cord layer 7 L1
ipsi
SCL7L1
3
Spinal cord layer 8 L1
ipsi
SCL8L1
3
Intermediomedial cell column L2
ipsi
IMML2
1
Lateral spinal nucleus L2
ipsi
LSpL2
2
Spinal cord layers L2
ipsi
SCLL2
2
Area X L2
ipsi
SCL10L2
3
Spinal cord layer 5 L2
ipsi
SCL5L2
1
Spinal cord layer 3 L2
ipsi
SCL3L2
0.5
Superficial dorsal horn L2
ipsi
SDHL2
0.5
Spinal cord layer 1 L2
ipsi
SCL1L2
0.5
Spinal cord layer 2 L2
ipsi
SCL2L2
1
Spinal cord layer 2 outer part L2
ipsi
SCL2opL2
-0.5
Reticular part of neck of dorsal horn L2
ipsi
rDHL2
-0.5
Lateral reticular part of neck of dorsal horn L2
ipsi
LrDHL2
-0.5
Medial part of neck of dorsal horn L2
ipsi
DHL2mn
1
Spinal cord layer 7 L2
ipsi
SCL7L2
3
Spinal cord layer 8 L2
ipsi
SCL8L2
3
Region just dorsolateral to layer 10 L2
ipsi
SCLL2rjd
-0.5
Intermediomedial cell column L3
ipsi
IMML3
1
Lateral spinal nucleus L3
ipsi
LSpL3
2
Spinal cord layers L3
ipsi
SCLL3
2
Area X L3
ipsi
SCL10L3
3
Spinal cord layer 5 L3
ipsi
SCL5L3
1
Spinal cord layer 3 L3
ipsi
SCL3L3
0.5
Superficial dorsal horn L3
ipsi
SDHL3
4
Spinal cord layer 1 L3
ipsi
SCL1L3
0.5
Spinal cord layer 2 L3
ipsi
SCL2L3
1
Spinal cord layer 2 outer part L3
ipsi
SCL2opL3
-0.5
Reticular part of neck of dorsal horn L3
ipsi
rDHL3
-0.5
Lateral reticular part of neck of dorsal horn L3
ipsi
LrDHL3
-0.5
Medial part of neck of dorsal horn L3
ipsi
DHL3mn
1
Spinal cord layer 7 L3
ipsi
SCL7L3
3
Spinal cord layer 8 L3
ipsi
SCL8L3
3
Region just dorsolateral to layer 10 L3
ipsi
SCLL3rjd
-0.5
Intermediomedial cell column L4
ipsi
IMML4
1
Lateral spinal nucleus L4
ipsi
LSpL4
2
Spinal cord layers L4
ipsi
SCLL4
2
Area X L4
ipsi
SCL10L4
3
Spinal cord layer 5 L4
ipsi
SCL5L4
1
Spinal cord layer 3 L4
ipsi
SCL3L4
0.5
Superficial dorsal horn L4
ipsi
SDHL4
4
Spinal cord layer 1 L4
ipsi
SCL1L4
0.5
Spinal cord layer 2 L4
ipsi
SCL2L4
1
Spinal cord layer 2 outer part L4
ipsi
SCL2opL4
-0.5
Reticular part of neck of dorsal horn L4
ipsi
rDHL4
-0.5
Lateral reticular part of neck of dorsal horn L4
ipsi
LrDHL4
-0.5
Medial part of neck of dorsal horn L4
ipsi
DHL4mn
1
Spinal cord layer 7 L4
ipsi
SCL7L4
3
Spinal cord layer 8 L4
ipsi
SCL8L4
3
Intermediomedial cell column L5
ipsi
IMML5
1
Lateral spinal nucleus L5
ipsi
LSpL5
2
Spinal cord layers L5
ipsi
SCLL5
2
Area X L5
ipsi
SCL10L5
3
Spinal cord layer 5 L5
ipsi
SCL5L5
1
Spinal cord layer 3 L5
ipsi
SCL3L5
0.5
Spinal cord layer 1 L5
ipsi
SCL1L5
0.5
Spinal cord layer 2 L5
ipsi
SCL2L5
1
Spinal cord layer 2 outer part L5
ipsi
SCL2opL5
-0.5
Reticular part of neck of dorsal horn L5
ipsi
rDHL5
-0.5
Lateral reticular part of neck of dorsal horn L5
ipsi
LrDHL5
-0.5
Spinal cord layer 7 L5
ipsi
SCL7L5
3
Spinal cord layer 8 L5
ipsi
SCL8L5
3
Intermediomedial cell column L6
ipsi
IMML6
1
Lateral spinal nucleus L6
ipsi
LSpL6
2
Spinal cord layers L6
ipsi
SCLL6
2
Area X L6
ipsi
SCL10L6
3
Spinal cord layer 5 L6
ipsi
SCL5L6
1
Spinal cord layer 3 L6
ipsi
SCL3L6
0.5
Spinal cord layer 1 L6
ipsi
SCL1L6
0.5
Spinal cord layer 2 L6
ipsi
SCL2L6
1
Spinal cord layer 2 outer part L6
ipsi
SCL2opL6
-0.5
Reticular part of neck of dorsal horn L6
ipsi
rDHL6
-0.5
Lateral reticular part of neck of dorsal horn L6
ipsi
LrDHL6
-0.5
Spinal cord layer 7 L6
ipsi
SCL7L6
3
Spinal cord layer 8 L6
ipsi
SCL8L6
3
Lateral spinal nucleus S1
ipsi
LSpS1
2
Spinal cord layers S1
ipsi
SCLS1
2
Area X S1
ipsi
SCL10S1
3
Spinal cord layer 5 S1
ipsi
SCL5S1
1
Spinal cord layer 3 S1
ipsi
SCL3S1
0.5
Spinal cord layer 1 S1
ipsi
SCL1S1
0.5
Spinal cord layer 2 S1
ipsi
SCL2S1
1
Spinal cord layer 7 S1
ipsi
SCL7S1
3
Spinal cord layer 8 S1
ipsi
SCL8S1
3
Lateral spinal nucleus S2
ipsi
LSpS2
2
Spinal cord layers S2
ipsi
SCLS2
2
Area X S2
ipsi
SCL10S2
3
Spinal cord layer 5 S2
ipsi
SCL5S2
1
Spinal cord layer 3 S2
ipsi
SCL3S2
0.5
Spinal cord layer 1 S2
ipsi
SCL1S2
0.5
Spinal cord layer 2 S2
ipsi
SCL2S2
1
Spinal cord layer 7 S2
ipsi
SCL7S2
3
Spinal cord layer 8 S2
ipsi
SCL8S2
3
Lateral spinal nucleus S3
ipsi
LSpS3
2
Spinal cord layers S3
ipsi
SCLS3
2
Area X S3
ipsi
SCL10S3
3
Spinal cord layer 5 S3
ipsi
SCL5S3
1
Spinal cord layer 3 S3
ipsi
SCL3S3
0.5
Spinal cord layer 1 S3
ipsi
SCL1S3
0.5
Spinal cord layer 2 S3
ipsi
SCL2S3
1
Spinal cord layer 7 S3
ipsi
SCL7S3
3
Spinal cord layer 8 S3
ipsi
SCL8S3
3
Lateral spinal nucleus S4
ipsi
LSpS4
2
Spinal cord layers S4
ipsi
SCLS4
2
Area X S4
ipsi
SCL10S4
3
Spinal cord layer 5 S4
ipsi
SCL5S4
1
Spinal cord layer 3 S4
ipsi
SCL3S4
0.5
Spinal cord layer 1 S4
ipsi
SCL1S4
0.5
Spinal cord layer 2 S4
ipsi
SCL2S4
1
Spinal cord layer 7 S4
ipsi
SCL7S4
3
Spinal cord layer 8 S4
ipsi
SCL8S4
3
Lumbosacral spinal cord layers medial portion of the intermediate gray zone
ipsi
LSSCLizm
-0.5
Lumbosacral spinal cord lateral spinal nucleus
ipsi
LSSCLS
-0.5
White matter adjacent to neck of dorsal horn from upper thoracic to sacral spinal levels
ipsi
wman
0.5
Dorsal cortex of the inferior colliculus
contra
DCIC
-1
Inferior part of the superficial gray layer of the superior colliculus
contra
SuGi
2
Superficial gray layer of the superior colliculus upper part
contra
SuGupp
2
Peduncularpontine nucleus
contra
PPN
-0.5
Laterodorsal tegmental nucleus
contra
LDTg
2
Pedunculopontine tegmental nucleus
contra
PPTg
1.5
Dorsolateral pedunculopontine tegmental nucleus
contra
PPTgDL
1
Interposed cerebellar nuclei
contra
ICN
3
Lateral cerebellar nucleus
contra
CERL
3
Medial cerebellar nucleus
contra
Med
3
Locus coeruleus
contra
LC
-0.5
Locus coeruleus dorsal part
contra
LCD
1
Koelliker Fuse nucleus
contra
KF
1
Lateral parabrachial nucleus external part
contra
LPBE
1
Medial parabrachial nucleus external part
contra
MPBE
1
Medial parabrachial nucleus medial division
contra
MPBM
1
Subnucleus reticularis dorsalis
contra
SRD
-0.5
Paratrigeminal nucleus
contra
Pa5
1
Principal sensory trigeminal nucleus
contra
Pr5
1.5
Spinal trigeminal nucleus
contra
Sp5nc
-0.5
Spinal trigeminal nucleus interpolar part
contra
Sp5I
0.5
Spinal trigeminal nucleus oral part
contra
Sp5O
-0.5
Trigeminal subnucleus caudalis
contra
5SSC
0.5
Nucleus of the solitary tract
contra
Sol
-0.5
Cuneate nucleus
contra
Cu
-0.5
Dorsal funiculus
contra
dfu
-2
Retinal ganglion cells
contra
RETg
-0.5
Cerebral cortex layer 1
contra
CCL1
1
Cerebral cortex layer 2
contra
CCL2
1
Cerebral cortex layer 3
contra
CCL3
1
Cerebral cortex layer 5
contra
CCL5
1
Cerebral cortex layer 6a
contra
CCL6a
1
Cerebral cortex layer 6b
contra
CCL6b
2
Neocortex
contra
NEOCX
-0.5
Frontal cortex area 2
contra
Fr2
-0.5
Lateral agranular prefrontal cortex
contra
AGl
2.5
Jaw movement motor cortex
contra
JMCx
1
Whiskers motor cortex
contra
WMCx
-0.5
Medial agranular prefrontal cortex
contra
AGm
2
Medial agranular prefrontal cortex layer 5 b
contra
AGmL5b
-0.5
Medial agranular prefrontal cortex layer 6
contra
AGmL6
-0.5
Primary somatosensory cortex
contra
S1
0
Visual regions
contra
VR
0
Precommissural nucleus
contra
PrC
-2
Lateral cervical nucleus
contra
LatC
-0.5
Lateral spinal nucleus
contra
MESLn
2
Spinal cord lamina 7
contra
MESL7
0.5
Spinal cord lamina 5
contra
MESL5
2
Spinal cord lamina 4
contra
MESL4
0.5
Spinal cord lamina 10
contra
MESL10
2
Spinal cord lamina 1
contra
MESL1
2
Spinal cord lamina 2
contra
MESL2
0.5
Prebrachial segments
contra
PSeg
0.5
Intermediomedial cell column C1
contra
IMMC1
3
Nucleus proprius C1
contra
PDHC1
-0.5
Spinal cord layer 3 C1
contra
SCL3C1
3
Spinal cord layer 1 C1
contra
SCL1C1
3
Spinal cord layer 2 C1
contra
SCL2C1
3
Ventral horn C1
contra
VHC1
3
Intermediate zone C1
contra
izVHC1
-0.5
Intermediomedial cell column C2
contra
IMMC2
3
Nucleus proprius C2
contra
PDHC2
-0.5
Spinal cord layer 3 C2
contra
SCL3C2
3
Spinal cord layer 1 C2
contra
SCL1C2
3
Spinal cord layer 2 C2
contra
SCL2C2
3
Ventral horn C2
contra
VHC2
3
Intermediate zone C2
contra
izVHC2
-0.5
Intermediomedial cell column C3
contra
IMMC3
-0.5
Nucleus proprius C3
contra
PDHC3
-0.5
Spinal cord layer 3 C3
contra
SCL3C3
3
Spinal cord layer 1 C3
contra
SCL1C3
3
Spinal cord layer 2 C3
contra
SCL2C3
3
Ventral horn C3
contra
VHC3
-0.5
Intermediate zone C3
contra
izVHC3
-0.5
Intermediomedial cell column C4
contra
IMMC4
-0.5
Nucleus proprius C4
contra
PDHC4
-0.5
Spinal cord layer 3 C4
contra
SCL3C4
3
Spinal cord layer 1 C4
contra
SCL1C4
3
Spinal cord layer 2 C4
contra
SCL2C4
3
Ventral horn C4
contra
VHC4
-0.5
Intermediate zone C4
contra
izVHC4
-0.5
Intermediomedial cell column C5
contra
IMMC5
-0.5
Nucleus proprius C5
contra
PDHC5
-0.5
Spinal cord layer 3 C5
contra
SCL3C5
3
Spinal cord layer 1 C5
contra
SCL1C5
3
Spinal cord layer 2 C5
contra
SCL2C5
3
Ventral horn C5
contra
VHC5
-0.5
Intermediate zone C5
contra
izVHC5
-0.5
Intermediomedial cell column C6
contra
IMMC6
-0.5
Nucleus proprius C6
contra
PDHC6
-0.5
Spinal cord layer 3 C6
contra
SCL3C6
3
Spinal cord layer 1 C6
contra
SCL1C6
3
Spinal cord layer 2 C6
contra
SCL2C6
3
Ventral horn C6
contra
VHC6
-0.5
Intermediate zone C6
contra
izVHC6
-0.5
Intermediomedial cell column C7
contra
IMMC7
-0.5
Nucleus proprius C7
contra
PDHC7
-0.5
Spinal cord layer 3 C7
contra
SCL3C7
3
Spinal cord layer 1 C7
contra
SCL1C7
3
Spinal cord layer 2 C7
contra
SCL2C7
3
Ventral horn C7
contra
VHC7
-0.5
Intermediate zone C7
contra
izVHC7
-0.5
Intermediomedial cell column C8
contra
IMMC8
-0.5
Nucleus proprius C8
contra
PDHC8
-0.5
Spinal cord layer 3 C8
contra
SCL3C8
3
Spinal cord layer 1 C8
contra
SCL1C8
3
Spinal cord layer 2 C8
contra
SCL2C8
3
Ventral horn C8
contra
VHC8
-0.5
Intermediate zone C8
contra
izVHC8
-0.5
Cervical enlargement
contra
CSegE
0.5
Cervical spinal cord layer 5
contra
CSegL5
0.5
Cervical spinal cord layer 7
contra
CSegL7
0.5
Intermediomedial cell column T1
contra
IMMT1
-0.5
Nucleus proprius T1
contra
PDHT1
-0.5
Spinal cord layer 3 T1
contra
SCL3T1
3
Spinal cord layer 1 T1
contra
SCL1T1
3
Spinal cord layer 2 T1
contra
SCL2T1
3
Ventral horn T1
contra
VHT1
-0.5
Intermediate zone T1
contra
izVHT1
-0.5
Intermediomedial cell column T2
contra
IMMT2
-0.5
Nucleus proprius T2
contra
PDHT2
-0.5
Spinal cord layer 3 T2
contra
SCL3T2
3
Spinal cord layer 1 T2
contra
SCL1T2
3
Spinal cord layer 2 T2
contra
SCL2T2
3
Ventral horn T2
contra
VHT2
-0.5
Intermediate zone T2
contra
izVHT2
-0.5
Intermediomedial cell column T3
contra
IMMT3
-0.5
Nucleus proprius T3
contra
PDHT3
-0.5
Spinal cord layer 3 T3
contra
SCL3T3
3
Spinal cord layer 1 T3
contra
SCL1T3
3
Spinal cord layer 2 T3
contra
SCL2T3
3
Ventral horn T3
contra
VHT3
-0.5
Intermediate zone T3
contra
izVHT3
-0.5
Intermediomedial cell column T4
contra
IMMT4
-0.5
Nucleus proprius T4
contra
PDHT4
-0.5
Spinal cord layer 3 T4
contra
SCL3T4
3
Spinal cord layer 1 T4
contra
SCL1T4
3
Spinal cord layer 2 T4
contra
SCL2T4
3
Ventral horn T4
contra
VHT4
-0.5
Intermediate zone T4
contra
izVHT4
-0.5
Intermediomedial cell column T5
contra
IMMT5
-0.5
Nucleus proprius T5
contra
PDHT5
-0.5
Spinal cord layer 3 T5
contra
SCL3T5
3
Spinal cord layer 1 T5
contra
SCL1T5
3
Spinal cord layer 2 T5
contra
SCL2T5
3
Ventral horn T5
contra
VHT5
-0.5
Intermediate zone T5
contra
izVHT5
-0.5
Intermediomedial cell column T6
contra
IMMT6
-0.5
Nucleus proprius T6
contra
PDHT6
-0.5
Spinal cord layer 3 T6
contra
SCL3T6
3
Spinal cord layer 1 T6
contra
SCL1T6
3
Spinal cord layer 2 T6
contra
SCL2T6
3
Ventral horn T6
contra
VHT6
-0.5
Intermediate zone T6
contra
izVHT6
-0.5
Intermediomedial cell column T7
contra
IMMT7
-0.5
Nucleus proprius T7
contra
PDHT7
-0.5
Spinal cord layer 3 T7
contra
SCL3T7
3
Spinal cord layer 1 T7
contra
SCL1T7
3
Spinal cord layer 2 T7
contra
SCL2T7
3
Ventral horn T7
contra
VHT7
-0.5
Intermediate zone T7
contra
izVHT7
-0.5
Intermediomedial cell column T8
contra
IMMT8
-0.5
Nucleus proprius T8
contra
PDHT8
-0.5
Spinal cord layer 3 T8
contra
SCL3T8
3
Spinal cord layer 1 T8
contra
SCL1T8
3
Spinal cord layer 2 T8
contra
SCL2T8
3
Ventral horn T8
contra
VHT8
-0.5
Intermediate zone T8
contra
izVHT8
-0.5
Intermediomedial cell column T9
contra
IMMT9
-0.5
Nucleus proprius T9
contra
PDHT9
-0.5
Spinal cord layer 3 T9
contra
SCL3T9
3
Spinal cord layer 1 T9
contra
SCL1T9
3
Spinal cord layer 2 T9
contra
SCL2T9
3
Ventral horn T9
contra
VHT9
-0.5
Intermediate zone T9
contra
izVHT9
-0.5
Intermediomedial cell column T10
contra
IMMT10
-0.5
Nucleus proprius T10
contra
PDHT10
-0.5
Spinal cord layer 3 T10
contra
SCL3T10
3
Spinal cord layer 1 T10
contra
SCL1T10
3
Spinal cord layer 2 T10
contra
SCL2T10
3
Ventral horn T10
contra
VHT10
-0.5
Intermediate zone T10
contra
izVHT10
-0.5
Intermediomedial cell column T11
contra
IMMT11
-0.5
Nucleus proprius T11
contra
PDHT11
-0.5
Spinal cord layer 3 T11
contra
SCL3T11
3
Spinal cord layer 1 T11
contra
SCL1T11
3
Spinal cord layer 2 T11
contra
SCL2T11
3
Ventral horn T11
contra
VHT11
-0.5
Intermediate zone T11
contra
izVHT11
-0.5
Intermediomedial cell column T12
contra
IMMT12
-0.5
Nucleus proprius T12
contra
PDHT12
-0.5
Spinal cord layer 3 T12
contra
SCL3T12
3
Spinal cord layer 1 T12
contra
SCL1T12
3
Spinal cord layer 2 T12
contra
SCL2T12
3
Ventral horn T12
contra
VHT12
-0.5
Intermediate zone T12
contra
izVHT12
-0.5
Intermediomedial cell column T13
contra
IMMT13
-0.5
Nucleus proprius T13
contra
PDHT13
-0.5
Spinal cord layer 3 T13
contra
SCL3T13
3
Spinal cord layer 1 T13
contra
SCL1T13
3
Spinal cord layer 2 T13
contra
SCL2T13
3
Ventral horn T13
contra
VHT13
-0.5
Intermediate zone T13
contra
izVHT13
-0.5
Lumbar segments
contra
LSeg
0.5
Lateral spinal nucleus L1
contra
LSpL1
1
Area X L1
contra
SCL10L1
3
Dorsal horn L1
contra
DHL1
3
Spinal cord layer 5 L1
contra
SCL5L1
3
Nucleus proprius L1
contra
PDHL1
-0.5
Spinal cord layer 3 L1
contra
SCL3L1
3
Spinal cord layer 1 L1
contra
SCL1L1
3
Spinal cord layer 2 L1
contra
SCL2L1
3
Ventral horn L1
contra
VHL1
-0.5
Intermediate zone L1
contra
izVHL1
-0.5
Spinal cord layer 7 L1
contra
SCL7L1
3
Spinal cord layer 8 L1
contra
SCL8L1
3
Lateral spinal nucleus L2
contra
LSpL2
1
Area X L2
contra
SCL10L2
3
Dorsal horn L2
contra
DHL2
3
Spinal cord layer 5 L2
contra
SCL5L2
3
Nucleus proprius L2
contra
PDHL2
-0.5
Spinal cord layer 3 L2
contra
SCL3L2
3
Spinal cord layer 1 L2
contra
SCL1L2
3
Spinal cord layer 2 L2
contra
SCL2L2
3
Ventral horn L2
contra
VHL2
-0.5
Intermediate zone L2
contra
izVHL2
-0.5
Spinal cord layer 7 L2
contra
SCL7L2
3
Spinal cord layer 8 L2
contra
SCL8L2
3
Lateral spinal nucleus L3
contra
LSpL3
1
Area X L3
contra
SCL10L3
3
Dorsal horn L3
contra
DHL3
3
Spinal cord layer 5 L3
contra
SCL5L3
3
Nucleus proprius L3
contra
PDHL3
-0.5
Spinal cord layer 3 L3
contra
SCL3L3
3
Spinal cord layer 1 L3
contra
SCL1L3
3
Spinal cord layer 2 L3
contra
SCL2L3
3
Ventral horn L3
contra
VHL3
-0.5
Intermediate zone L3
contra
izVHL3
-0.5
Spinal cord layer 7 L3
contra
SCL7L3
3
Spinal cord layer 8 L3
contra
SCL8L3
3
Lateral spinal nucleus L4
contra
LSpL4
1
Area X L4
contra
SCL10L4
3
Dorsal horn L4
contra
DHL4
3
Spinal cord layer 5 L4
contra
SCL5L4
3
Nucleus proprius L4
contra
PDHL4
-0.5
Spinal cord layer 3 L4
contra
SCL3L4
3
Spinal cord layer 1 L4
contra
SCL1L4
3
Spinal cord layer 2 L4
contra
SCL2L4
3
Ventral horn L4
contra
VHL4
-0.5
Intermediate zone L4
contra
izVHL4
-0.5
Spinal cord layer 7 L4
contra
SCL7L4
3
Spinal cord layer 8 L4
contra
SCL8L4
3
Lateral spinal nucleus L5
contra
LSpL5
1
Area X L5
contra
SCL10L5
3
Dorsal horn L5
contra
DHL5
3
Spinal cord layer 5 L5
contra
SCL5L5
3
Nucleus proprius L5
contra
PDHL5
-0.5
Spinal cord layer 3 L5
contra
SCL3L5
3
Spinal cord layer 1 L5
contra
SCL1L5
3
Spinal cord layer 2 L5
contra
SCL2L5
3
Ventral horn L5
contra
VHL5
-0.5
Intermediate zone L5
contra
izVHL5
-0.5
Spinal cord layer 7 L5
contra
SCL7L5
3
Spinal cord layer 8 L5
contra
SCL8L5
3
Lateral spinal nucleus L6
contra
LSpL6
1
Area X L6
contra
SCL10L6
3
Dorsal horn L6
contra
DHL6
3
Spinal cord layer 5 L6
contra
SCL5L6
3
Nucleus proprius L6
contra
PDHL6
-0.5
Spinal cord layer 3 L6
contra
SCL3L6
3
Spinal cord layer 1 L6
contra
SCL1L6
3
Spinal cord layer 2 L6
contra
SCL2L6
3
Ventral horn L6
contra
VHL6
-0.5
Intermediate zone L6
contra
izVHL6
-0.5
Spinal cord layer 7 L6
contra
SCL7L6
3
Spinal cord layer 8 L6
contra
SCL8L6
3
Lateral spinal nucleus S1
contra
LSpS1
1
Area X S1
contra
SCL10S1
3
Dorsal horn S1
contra
DHS1
3
Spinal cord layer 5 S1
contra
SCL5S1
3
Spinal cord layer 3 S1
contra
SCL3S1
3
Spinal cord layer 1 S1
contra
SCL1S1
3
Spinal cord layer 2 S1
contra
SCL2S1
3
Ventral horn S1
contra
VHSa1
-0.5
Intermediate zone S1
contra
izVHS1
-0.5
Spinal cord layer 7 S1
contra
SCL7S1
3
Spinal cord layer 8 S1
contra
SCL8S1
3
Lateral spinal nucleus S2
contra
LSpS2
1
Area X S2
contra
SCL10S2
3
Dorsal horn S2
contra
DHS2
3
Spinal cord layer 5 S2
contra
SCL5S2
3
Spinal cord layer 3 S2
contra
SCL3S2
3
Spinal cord layer 1 S2
contra
SCL1S2
3
Spinal cord layer 2 S2
contra
SCL2S2
3
Ventral horn S2
contra
VHSa2
-0.5
Intermediate zone S2
contra
izVHS2
-0.5
Spinal cord layer 7 S2
contra
SCL7S2
3
Spinal cord layer 8 S2
contra
SCL8S2
3
Lateral spinal nucleus S3
contra
LSpS3
1
Area X S3
contra
SCL10S3
3
Dorsal horn S3
contra
DHS3
3
Spinal cord layer 5 S3
contra
SCL5S3
3
Spinal cord layer 3 S3
contra
SCL3S3
3
Spinal cord layer 1 S3
contra
SCL1S3
3
Spinal cord layer 2 S3
contra
SCL2S3
3
Ventral horn S3
contra
VHSa3
-0.5
Intermediate zone S3
contra
izVHS3
-0.5
Spinal cord layer 7 S3
contra
SCL7S3
3
Spinal cord layer 8 S3
contra
SCL8S3
3
Lateral spinal nucleus S4
contra
LSpS4
1
Area X S4
contra
SCL10S4
3
Dorsal horn S4
contra
DHS4
3
Spinal cord layer 5 S4
contra
SCL5S4
3
Spinal cord layer 3 S4
contra
SCL3S4
3
Spinal cord layer 1 S4
contra
SCL1S4
3
Spinal cord layer 2 S4
contra
SCL2S4
3
Ventral horn S4
contra
VHSa4
-0.5
Intermediate zone S4
contra
izVHS4
-0.5
Spinal cord layer 7 S4
contra
SCL7S4
3
Spinal cord layer 8 S4
contra
SCL8S4
3
Ventral horn Co1
contra
VHCo1
-0.5
Ventral horn Co2
contra
VHCo2
-0.5
Ventral horn Co3
contra
VHCo3
-0.5
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
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