University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Hindlimb right


Abbreviation
MuscHi
Color       
Superior regionsMuscle system

SynonymsAbbr.Language
HindlimbMuscHiEng
Hindlimb muscles Eng

SubregionsSide
Femoral musclesright
Hind leg musclesright
Tibial muscleright
Tibialis anterior muscleright
Short plantar muscleright
Peroneus muscleright
Posterior tibialis muscleright
Flexor hallicus longusright
Flexor digitorum longusright
Hindlimb muscles vasculatureright
Abductor digiti minimi muscleright
Knee musclesright
Inguinal musclesright
Hindleg musclesright
Gluteus maximus muscleright
Gracilis muscle of hindlimbright
Vastus lateralis muscle of the hindlimbright
Vastus medialis of the hindlimbright
Gastrocnemius soleus muscleright
Extensor digitorum longus muscle hindlimbright
Peroneus longus muscleright
Extensor hallucis longus muscleright
Gluteus medius muscleright

Output to

NameSideAbbr.WeightDetails
PonscontraP-0.5
Brachium pontis stem of middle cerebellar peduncleipsibp-2
Lateral ponsipsiLaP3
Pons medial partipsiPme3
Pons ventral partipsiPve3
Reticulotegmental nucleus of the ponsipsiRtTg2
Dorsal column nucleiipsiDCN-0.5
Medial lemniscusipsiml-2
Dorsal peduncular cortexipsiDP2
Secondary visual cortex lateral area infragranular layersipsiV2LigL1
Spinal cord lamina 1 lumbar level 4 medial portionipsiMESL1L4mp-0.5

Input from

NameSideAbbr.WeightDetails
A5 noradrenaline cellscontraA5-10
Locus coeruleuscontraLC-10
Subcoerulear areacontraSCoe-10
Rostral ventrolateral medullacontraRVLM-10
Lateral hypothalamic areacontraLH-10
Arcuate nucleuscontraArc-10
Paraventricular hypothalamic nucleuscontraPa-10
Frontal cortex area 1 caudal partcontraFr1c1
Hindleg region of the frontal cortexcontraFrHL1
Trunk region of the lateral agranular frontal cortexcontraAGlt1
Lateral periaqueductal gray caudalipsiLPAGC-10
Ventral periaqueductal gray caudal levelipsiVPAGc-10
A5 noradrenaline cellsipsiA5-10
A7 noradrenaline cellsipsiA7-10
Locus coeruleusipsiLC-10
Subcoerulear areaipsiSCoe-10
Gigantocellular reticular nucleusipsiGi-10
C1 adrenaline cells rostral partipsiC1ro-10
Raphe magnus nucleusipsiRMg-10
Rostral ventrolateral medullaipsiRVLM-10
Paragigantocellular reticular nucleusipsiPGi-10
Rostral part of the ventromedial medulla oblongataipsiRMeObvm-10
Lateral hypothalamic areaipsiLH-10
Arcuate nucleusipsiArc-10
Paraventricular hypothalamic nucleusipsiPa-10
Lateral funiculusipsilf-10
Bed nucleus of the stria terminalisipsiBST-10
Frontal cortex area 1 caudal partipsiFr1c3
Hindleg region of the frontal cortexipsiFrHL3
Trunk region of the lateral agranular frontal cortexipsiAGlt3
Intermediolateral cell columnipsiIML-10
Intermediomedial cell columnipsiIMM-10
Intermediolateral cell column T10ipsiIMLT10-10
Intermediolateral cell column T11ipsiIMLT11-10
Intermediolateral cell column T12ipsiIMLT12-10
Intermediolateral cell column T13ipsiIMLT13-10
Intermediolateral cell column L1ipsiIMLL1-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications