University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinomedullary junction left


Abbreviation
SMJ
Color       
Superior regionsMyelencephalon

SynonymsAbbr.Language
Transition level of the medulla oblongata and spinal cord Eng
Medullary trans-nuclear field Eng
Spinomedullary junctionSMJEng

Output to

NameSideAbbr.WeightDetails
Mesencephalic trigeminal nucleusipsiMe52
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp2
Insular trigeminal-cuneatus lateralis nucleusipsii5CuL1
Spinal trigeminal nucleus interpolar part border regionipsiSp5Ib2
Spinal trigeminal nucleus interpolar part dorsolateralipsiSp5IdL2
Spinal trigeminal nucleus interpolar part ventrolateral partipsiSp5IVL2
Caudal ventrolateral spinal trigeminal nucleus interpolar partipsiSp5ICVL-0.5
Spinal trigeminal nucleus oral part dorsolateral partipsiSp5ODL2
Ventrolateral part of spinal trigeminal nucleus oral partipsiSp5OVL2
Ventromedial hypothalamic nucleusipsiVMH3
Ventrolateral thalamic nucleusipsiVL3
Forelimb motor cortexcontraFMCx3
Caudal forelimb motor areacontraCFMA3
Lateral part of the granular cortex of forelimb motor regionscontraLFMCx3
Geniohyoid muscleipsiMuscGenio2
Thyrohyoid muscleipsiMuscthyro2

Input from

NameSideAbbr.WeightDetails
Area postremaipsiAP1
Lateral zoneipsiLHA3
Forelimb motor cortexcontraFMCx3
Caudal forelimb motor areacontraCFMA3
Lateral part of the granular cortex of forelimb motor regionscontraLFMCx3
Nodose ganglionipsiAutoNoG-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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