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Rat connectome



Mesencephalic trigeminal nucleus left


Abbreviation
Me5
Color       
Superior regionsTrigeminal nucleus

SynonymsAbbr.Language
 MEV 
 MTN 
Mesencephalic nucleus of the trigeminal nerveMe5 
Mesencephalic nucleus Eng
Mesencephalic nucleus of trigeminal nerve  
Zone between parabrachial nucleus and locus coeruleus Eng
Trigeminal mesencephalic nucleus Mes5Eng
Deep mesencephalic trigeminal nucleus Eng
Trigeminal mesencephalic nucleus  Eng
Mesencephalic trigeminal nucleus area Eng
Nucleus of the mesencephalic tract of the trigeminal nerve Eng
Mesencephalic trigeminal nucleusMe5Eng
Trigeminal mesencephalic nucleus TMENEng

SubregionsSide
Dorsal part of the mesencephalic trigeminal nucleusleft
Mesencephalic trigeminal nucleus dorsolateral partleft
Mesencephalic trigeminal nucleus lateral partleft
Mesencephalic trigeminal nucleus medial partleft
Mesencephalic trigeminal nucleus mesencephalic pontine junctionleft
Mesencephalic trigeminal nucleus midbrain portionleft
Mesencephalic trigeminal nucleus rostral partleft
Mesencephalic trigeminal nucleus rostral ponsleft
Mesencephalic trigeminal nucleus ventral partleft
Mesencephalic trigeminal nucleus ventrolateral partleft
Pontine part of the mesencephalic trigeminal nucleusleft
Triangular shaped part of the mesencephalic trigeminal nucleusleft
Trigeminal mesencephalic rootleft
Mesencephalic trigeminal nucleus ventrocaudal partleft
Mesencephalic trigeminal nucleus mediodorsal partleft
Mesencephalic trigeminal nucleus middle partleft
Surrounding caudal mesencephalic nucleus of the trigeminal nerveleft
Mesencephalic trigeminal nucleus caudodorsal partleft
Mesencephalic trigeminal nucleus caudal partleft
Mesencephalic trigeminal nucleus rostrocaudal extentleft

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk-0.5
Oculomotor nucleusipsi30
Periaqueductal grayipsiPAG2
Periaqueductal gray rostral partipsiPAGR3
Periventricular gray matteripsiPVG-2
Superior colliculusipsiSC2
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Dorsal tegmental bundleipsidtg-0.5
Ventral tegmental area A10ipsiVTA3
Retrorubral nucleusipsiRR-2
Lateral medullary tegmentumipsiTGML-0.5
Edinger Westphal nucleusipsiEW2
Interstitial nucleus of CajalipsiInC-0.5
CerebellumipsiCERE0
Anterior medullary velumipsiAMVe-0.5
Ansiform lobule crus 1ipsiCrus10
Ansiform lobule crus 2ipsiCrus20
Paramedian lobuleipsiPM0
CX-zoneipsiCXZO0.5
X-zoneipsiXZO0.5
Cerebellar lobule 2a zone AipsiCERL2aA0
Cerebellar lobule 2b zone AipsiCERL2bA0
Cerebellar lobule 3a zone BipsiCERL3aB0
Cerebellar lobule 3a zone C1ipsiCERL3aC10
Cerebellar lobule 3a zone C2ipsiCERL3aC20
Cerebellar lobule 3a zone C3ipsiCERL3aC30
Cerebellar lobule 3b zone BipsiCERL3bB0
Cerebellar lobule 3b zone C1ipsiCERL3bC10
Cerebellar lobule 3b zone C2ipsiCERL3bC20
Cerebellar lobule 3b zone C3ipsiCERL3bC30
Cerebellar lobule 1 zone AipsiCERL1A0
Cerebellar lobule 4 zone AipsiCERL4A0
Cerebellar lobule 4 zone BipsiCERL4B0
Cerebellar lobule 9ipsiCERL90
Cerebellar lobule 6a zone AipsiCERL6aA0
Cerebellar lobule 6b zone AipsiCERL6bA0
Cerebellar lobule 6c zone AipsiCERL6cA0
Cerebellar lobule 6d zone AipsiCERL6dA0
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC3
Locus coeruleus posterior partipsiLCp2.5
Locus coeruleus ventrolateral partipsiLCvL2.5
Area surrounding the locus coeruleusipsiLCas-2
Nucleus of Probsts bundleipsiNPB-0.5
Probst bundleipsiprb-2
Probst's tract medullaipsiprbm-2
Reticular systemipsiRF-0.5
Dorsolateral reticular formationipsiDLRF-0.5
Reticular formation caudal to the Mo5ipsiRFcMo5-0.5
Mesencephalic reticular formationipsiMRF-2
Parvicellular nucleus of the pontomedullary reticular formationipsiMPRFp-0.5
Pontine reticular nucleusipsiPRN-0.5
Parabrachial nucleusipsiPB0.5
Lateral parabrachial nucleusipsiLPB1.5
Gigantocellular reticular nucleusipsiGi0.5
Lateral reticular nucleusipsiLRt4
Lateral reticular nucleus parvicellular partipsiLRtPC-0.5
Medullary reticular nucleusipsiMdD-1
Subnucleus reticularis dorsalisipsiSRD3
Medullary reticular nucleus dorsal partipsiMdDd1
Parvicellular reticular nucleusipsiPCRt3
Dorsal parvocellular reticular formationipsiDPCRt-0.5
Dorsolateral parvicellular reticular nucleusipsiPCRtDL3
C2 adrenaline cellsipsiC2-0.5
Accessory abducens nucleusipsiACVI-0.5
Facial nucleusipsi70
Accessory facial nucleusipsiAcs71
Facial nucleus caudal partipsi7c-0.5
Ventrolateral hypoglossal nucleusipsi12SVL-0.5
Hypoglossal nucleus ventral partipsi12SV1.5
Lateral accessory subcompartment of the ventral hypoglossal nucleusipsi12SVLA1
Hypoglossal nucleus dorsolateral partipsi12SDL3
Dorsolateral caudal hypoglossal nucleusipsi12SDCC3
Dorsomedial subdivision of the hypoglossal nucleusipsi12DM1
Mesencephalic trigeminal tractipsime5-0.5
Intertrigeminal nucleusipsiI5-0.5
Juxtatrigeminal areaipsiJx5-0.5
Supratrigeminal nucleusipsiSu53
Mesencephalic trigeminal nucleusipsiMe5-0.5
Motor trigeminal nucleusipsiMo54
Accessory motor trigeminal nucleusipsiaMo5-0.5
Lateral part of the motor trigeminal nucleusipsiLMo54
Motor root of the trigeminal nerveipsim51.5
Motor trigeminal nucleus dorsolateral partipsiMo5DL3
Motor trigeminal nucleus ventral partipsiMo5V2
Motor trigeminal nucleus ventromedial partipsiMo5VM3
Motor trigeminal nucleus jaw closing componentipsiMo5jcc3
Motor trigeminal nucleus jaw opening componentipsiMo5joc-0.5
Principal sensory trigeminal nucleusipsiPr5-0.5
Principal sensory trigeminal nucleus dorsomedial partipsiPr5DM-0.5
Principal sensory trigeminal nucleus interpolar partipsiPr5ip-0.5
Spinal trigeminal nucleusipsiSp5nc1
Dorsomedial part of the spinal trigeminal nucleusipsiSp5ncDM3
Spinal trigeminal nucleus caudal partipsiSp5C-0.5
Spinal trigeminal nucleus caudal part medial partipsiSp5Cm-0.5
Spinal trigeminal nucleus interpolar part dorsomedial partipsiSp5IDM3
Dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODM3
Peritrigeminal zoneipsiP50
Trigeminal ganglionipsi5Gn3
Trigeminal rootipsi5root-2
Cochlear nucleusipsiCON0
Region dorsally adjacent to the superior vestibular nucleusipsiDSuVe0.5
Medial vestibular nucleusipsiMVe1
Medial vestibular nucleus parvicellular partipsiMVePC-2
Lateral vestibular nucleus dorsal partipsiLVeD0.5
Lateral vestibular nucleus ventral partipsiLVeV3
Inferior vestibular nucleusipsiIVN2
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract commissural partipsiSolC1
Nucleus of the solitary tract dorsolateral partipsiSolDL3
Nucleus of the solitary tract intermediate partipsiSolIM-0.5
Nucleus of the solitary tract interstitial partipsiSoli3
Nucleus of the solitary tract rostral partipsiSolro1
Nucleus of the solitary tract ventrolateral partipsiSolVL3
Parasolitary nucleusipsiPSol-0.5
Dorsal motor nucleus of vagus lateral partipsi10L3
Dorsal raphe nucleusipsiDR3
Median raphe nucleusipsiMnR2
Central raphe nucleusipsiCRN3
Gracile nucleus principal partipsiGr-0.5
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Diagonal band of BrocaipsiDBB1
Substantia innominataipsiSI3
Lateral preoptic areaipsiLPO2
Tuberomammillary nucleus dorsomedial partipsiTBMdm2
Ventral tuberomammillary nucleusipsiVTM2
Glia limitans ventral to the ventral tuberomammillary nucleusipsiTuMgL2
Dorsomedial hypothalamic nucleusipsiDMHy3
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR3
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area suprafornical regionipsiLHAs0.5
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleusipsiLHVTM2
Posterior hypothalamic nucleusipsiPH0
Paraventricular hypothalamic nucleus magnocellular part [Periventricular zone anterior region]ipsiPaAM-0.5
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa-0.5
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa-0.5
Paraventricular hypothalamic nucleusipsiPa3
Suprachiasmatic nucleusipsiSCh0
Supraoptic hypothalamic partipsiSOHYP0
Lateral mammillary nucleusipsiLM2
Premammillary nucleus dorsal partipsiPMD2
Premammillary nucleus ventromedial partipsiPMvm2
Supramammillar nucleus lateral partipsiSuML2
Central medial thalamic nucleusipsiCM4
Parafascicular thalamic nucleusipsiPF3
Mediodorsal thalamic nucleusipsiMD3
Intermediodorsal thalamic nucleusipsiIMD4
Mediodorsal thalamic nucleus central partipsiMDC2
Mediodorsal thalamic nucleus medial partipsiMDM2
Submedius thalamic nucleusipsiSub3
Paratenial thalamic nucleusipsiPT3
Paraventricular thalamic nucleus posterior partipsiPVP3
Reuniens thalamic nucleusipsiRe3
Ventral posteromedial thalamic nucleusipsiVPM-0.5
Lateral posterior thalamic nucleusipsiLP1
Posterior groupipsiPTG0
Zona incertaipsiZI0
RetinaipsiRET-0.5
Central tegmental bundleipsictb-2
Dorsal funiculusipsidfu-2
Basolateral amygdaloid nucleusipsiBL0.5
Posterior basolateral nucleusipsiBLP1
Basomedial amygdaloid nucleusipsiBM2
Bed nucleus of the stria terminalis anterior divisionipsiBSTA4
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV4
Lateral capsular subdivision of the central nucleus of the amygdalaipsiCeLac3
Central amygdaloid nucleus lateral divisionipsiCeL3
Central amygdaloid nucleus medial divisionipsiCeM3
Intercalated cell chain between Ce BL LAipsiIMcc3
Intercalated masses between intermediate and external fiber capsulesipsiIMie-0.5
Intercalated masses dorsal to the rostral pole of CeipsiIMdr-0.5
Intercalated masses ventral and dorsal to posterior limb of the anterior commissureipsiIMvd-0.5
Parasubthalamic nucleusipsiPSTh3
Subiculum ventral partipsiSv1
Septohippocampal nucleusipsiSHi1
Anterior insular cortexipsiICXa1
Lateral septal nucleusipsiLS1
Dorsal horn of spinal cordipsiDHMES-0.5
Cervical segment 1ipsiCS10.5
Central cervical nucleus C1ipsiCeCvC10
Intermediomedial cell column C1ipsiIMMC11
Dorsal horn C1ipsiDHC11
Spinal cord layer 5 C1ipsiSCL5C1-0.5
Spinal cord layer 6 C1ipsiSCL6C1-0.5
Cervical segment 2ipsiCS20.5
Central cervical nucleus C2ipsiCeCvC20
Intermediomedial cell column C2ipsiIMMC21
Dorsal horn C2ipsiDHC21
Spinal cord layer 5 C2ipsiSCL5C2-0.5
Spinal cord layer 6 C2ipsiSCL6C2-0.5
Cervical segment 3ipsiCS3-0.5
Central cervical nucleus C3ipsiCeCvC30
Intermediomedial cell column C3ipsiIMMC31
Dorsal horn C3ipsiDHC31
Cervical segment 4ipsiCS4-0.5
Central cervical nucleus C4ipsiCeCvC40
Intermediomedial cell column C4ipsiIMMC43
Dorsal horn C4ipsiDHC4-0.5
Cervical segment 5ipsiCS5-0.5
Central cervical nucleus C5ipsiCeCvC50
Intermediomedial cell column C5ipsiIMMC53
Dorsal horn C5ipsiDHC5-0.5
Cervical segment 6ipsiCS6-0.5
Central cervical nucleus C6ipsiCeCvC60
Dorsal horn C6ipsiDHC6-0.5
Cervical segment 7ipsiCS7-0.5
Central cervical nucleus C7ipsiCeCvC70
Dorsal horn C7ipsiDHC7-0.5
Cervical segment 8ipsiCS8-0.5
Central cervical nucleus C8ipsiCeCvC80
Dorsal horn C8ipsiDHC8-0.5
Cervical enlargementipsiCSegE-0.5
Thoracal segment 1ipsiT1-0.5
Thoracal segment 2ipsiT2-0.5
Thoracal segment 3ipsiT3-0.5
Thoracal segment 4ipsiT4-0.5
Thoracal segment 5ipsiT5-0.5
Thoracal segment 6ipsiT6-0.5
Thoracal segment 7ipsiT7-0.5
Thoracal segment 8ipsiT8-0.5
Spinal cord layer 8 T8ipsiSCL8T8-0.5
Thoracal segment 9ipsiT9-0.5
Spinal cord layer 8 T9ipsiSCL8T9-0.5
Thoracal segment 10ipsiT10-0.5
Spinal cord layer 8 T10ipsiSCL8T10-0.5
Thoracal segment 11ipsiT11-0.5
Spinal cord layer 8 T11ipsiSCL8T11-0.5
Thoracal segment 12ipsiT12-0.5
Spinal cord layer 8 T12ipsiSCL8T12-0.5
Thoracal segment 13ipsiT13-0.5
Spinal cord layer 8 T13ipsiSCL8T13-0.5
Lumbar segment 1ipsiL1-0.5
Intermediomedial cell column L1ipsiIMML11
Lumbar segment 2ipsiL2-0.5
Intermediomedial cell column L2ipsiIMML21
Lumbar segment 3ipsiL3-0.5
Intermediomedial cell column L3ipsiIMML31
Lumbar segment 4ipsiL4-0.5
Intermediomedial cell column L4ipsiIMML41
Lumbar segment 5ipsiL5-0.5
Intermediomedial cell column L5ipsiIMML51
Lumbar segment 6ipsiL6-0.5
Intermediomedial cell column L6ipsiIMML61
Sacral segment 1ipsiSa1-0.5
Sacral segment 2ipsiSa2-0.5
Sacral segment 3ipsiSa3-0.5
Sacral segment 4ipsiSa4-0.5
Coccygeal segment 1ipsiCo1-0.5
Coccygeal segment 2ipsiCo2-0.5
Coccygeal segment 3ipsiCo3-0.5
Superior colliculuscontraSC2
Lateral cerebellar nucleuscontraCERL1.5
Barringtons nucleuscontraBar0.5
Reticular systemcontraRF-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Medullary reticular nucleus dorsal partcontraMdDd0.5
Parvicellular reticular nucleuscontraPCRt0
Dorsal parvocellular reticular formationcontraDPCRt-0.5
Intertrigeminal nucleuscontraI5-0.5
Juxtatrigeminal areacontraJx5-0.5
Supratrigeminal nucleuscontraSu5-0.5
Mesencephalic trigeminal nucleuscontraMe50
Motor trigeminal nucleuscontraMo51
Motor trigeminal nucleus jaw closing componentcontraMo5jcc1.5
Nucleus of the solitary tract commissural partcontraSolC1
Nucleus of the solitary tract intermediate partcontraSolIM-0.5
Parasolitary nucleuscontraPSol-0.5
Median raphe nucleuscontraMnR0
Gracile nucleus principal partcontraGr-0.5
Rostral part of the ventromedial medulla oblongatacontraRMeObvm3
Posterior hypothalamic nucleuscontraPH1
Mediodorsal thalamic nucleus central partcontraMDC1
Mediodorsal thalamic nucleus lateral partcontraMDL1
Mediodorsal thalamic nucleus medial partcontraMDM1
Ventral posteromedial thalamic nucleuscontraVPM-0.5
Intermediomedial cell column C1contraIMMC10.5
Dorsal horn C1contraDHC10.5
Intermediomedial cell column C2contraIMMC20.5
Dorsal horn C2contraDHC20.5
Intermediomedial cell column C3contraIMMC30.5
Dorsal horn C3contraDHC30.5
Intermediomedial cell column C4contraIMMC40.5
Intermediomedial cell column L1contraIMML10.5
Intermediomedial cell column L2contraIMML20.5
Intermediomedial cell column L3contraIMML30.5
Intermediomedial cell column L4contraIMML40.5
Intermediomedial cell column L5contraIMML50.5
Intermediomedial cell column L6contraIMML60.5
Pterygopalatine ganglionipsiAutoPpG-0.5
Submandibular ganglionipsiAutoGsm3
Nervus petrosus majoripsinpm-1
Sympathetic nervous systemipsiSNS2
Parasympathetic nervous systemipsiPaNS2
Facial nerveipsi7fn-0.5
Chorda tympaniipsi7fnChoTy0
Hypoglossal nerveipsi12P3
Inferior alveolar nerveipsiialv2
Infraorbital nerveipsiiobn1
Auriculotemporal nerveipsi5V3Aute-2
Lingual nerveipsi5V3Li0
Mandibulary minus motor nerveipsi5V3mm-2
Mandibulary nerve plexusipsi5V3px0.5
Masseteric nerveipsimass3
Mylohyoid nerveipsimyhy3
Nerve branch to the anterior belly of the digastricus muscleipsinbabd0.5
Medial pterygoid nerveipsipterygoM2
Temporalis nerveipsitemp1.5
Deep temporal nerveipsitempD2
Hypoglossal nervecontra12P1
Masseteric nervecontramass1
Vibrissal follicle complexipsiVFC-0.5
Whisker padipsiFVFCwp-0.5
Digastricus muscleipsiMuscDig0
External eye musclesipsiMuscEEye-0.5
Genioglossus muscleipsiMuscGenioG-0.5
Masticatory musclesipsiMuscMast3
Musculus masseteripsiMuscMass3
Muscle spindles of the masseter muscleipsiMuscMassSpi-0.5
Posterior masseter muscleipsiMuscPMass3
Temporal muscleipsiMuscT3
Lateral pterygoid muscleipsiMuscPterL0
Mylohyoid muscleipsiMuscMyhy3
PenisipsiOrgPenis-0.5
Whisker padcontraFVFCwp-0.5

Input from

NameSideAbbr.WeightDetails
Superficial temporal arteryipsista0
Dura materipsidura1
Adventitia of the superior dura sinusipsiasds0
Central grayipsiCG3
Central gray lateral ventral partipsiCGVD3
Dorsomedial periaqueductal grayipsiDMPAG0.5
Lateral periaqueductal grayipsiLPAG1.5
Ventrolateral periaqueductal grayipsiVLPAG1.5
Superior colliculusipsiSC2
Superior colliculus lateral partipsiSCL0.5
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Superior colliculus medial partipsimSC0.5
Superior colliculus rostrocaudal partipsiSCrc0.5
Surrounding central tegmental fieldipsiTGACsur3
Peduncularpontine nucleusipsiPPN1
Substantia nigra compact partipsiSNC3
Substantia nigra compact part dorsal surfaceipsiSNCDs-0.5
Substantia nigra compact part lateral part of the dorsal surfaceipsiSNCDLs3
Substantia nigra lateral partipsiSNL2
Substantia nigra reticular partipsiSNR0.5
Rostral medial border of the substantia nigra A9ipsiSNrmb-0.5
Ventral tegmental area A10ipsiVTA3
Ventral tegmental area rostral partipsiVTAR-0.5
Laterodorsal tegmental nucleusipsiLDTg0.5
Edinger Westphal nucleusipsiEW1.5
Lateral cerebellar nucleusipsiCERL-0.5
Locus coeruleusipsiLC0.5
Nucleus incertus pars dissipataipsiNId1
Prepositus nucleusipsiPr-0.5
Reticular systemipsiRF-0.5
Caudoventrolateral reticular nucleusipsiCVLR0.5
Medial reticular formationipsiRFm1
Mesencephalic reticular formationipsiMRF3
Pontine reticular nucleusipsiPRN2
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB3
Gigantocellular reticular nucleusipsiGi-0.5
Gigantocellular reticular nucleus alpha partipsiGiA-0.5
Lateral reticular nucleusipsiLRt0
Medullary reticular nucleusipsiMdD-0.5
Medullary reticular nucleus dorsal partipsiMdDd2
Ventral medullary reticular formationipsiVMurF0
Lateral part of the ventral medullary reticular formationipsiLVMurF1
Parvicellular reticular nucleusipsiPCRt4
Area postremaipsiAP-0.5
Facial nucleus medial partipsi7M0
Supratrigeminal nucleusipsiSu5-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleusipsiSp5nc0
Spinal trigeminal nucleus caudal partipsiSp5C1
Spinal trigeminal nucleus caudal part dorsomedial partipsiSp5CDM-0.5
Spinal trigeminal nucleus interpolar partipsiSp5I2
Spinal trigeminal nucleus oral partipsiSp5O3
Dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODM3
Trigeminal ganglionipsi5Gn1
Mandibular region of the trigeminal ganglion at the level of the entry of the mandibular nerveipsi5GnMaEm1
Caudal area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnCOM1
Rostral area of the ophthalmomaxillary region of the trigeminal ganglionipsi5GnROM1
Superficial part of the trigeminal ganglionipsi5GnS1
Medial vestibular nucleus parvicellular partipsiMVePC1
Nucleus of the solitary tractipsiSol3
11 beta hydroxysteroiddehydrogenase type-2 cellsipsiSolHSD22
Nucleus of the solitary tract caudal partipsiSolca3
Rostral central part of the nucleus of the solitary tractipsiSolRCe3
Nucleus of the solitary tract intermediate partipsiSolIM3
Nucleus of the solitary tract medial partipsiSolM1
Nucleus of the solitary tract rostral partipsiSolro3
Medial part of rostral portion of the nucleus of the solitary tractipsiSolroM0.5
Ventral part of the rostral nucleus of the solitary tractipsiSolroV2
Nucleus of the solitary tract rostrolateral partipsiSolRL1
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm-0.5
Dorsal raphe nucleus lateral wingipsiDRlw-0.5
Dorsal raphe nucleus ventromedial subdivisionipsiDRvme-0.5
Median raphe nucleusipsiMnR1
Superior central raphe nucleusipsiCS1
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb-0.5
Caudoventral reticular nucleusipsiCVL0.5
Dorsomedial rostral medulla oblongataipsiMeObdmr1
Paragigantocellular reticular nucleusipsiPGi1
Dorsal paragigantocellular nucleusipsiDPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi0.5
Spinomedullary junctionipsiSMJ2
Substantia innominataipsiSI3
Substantia innominata lateral partipsiSIl3
Preoptic regionipsiPREO0.5
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA0.5
Magnocellular preoptic nucleusipsiMCPO3
Medial preoptic nucleusipsiMPO0.5
Median preoptic nucleusipsiMnPO3
Tuberomammillary nucleusipsiTuM0.5
Tuberomammillary nucleus lateral partipsiTuML-0.5
Lateral half of the ventral subdivision of the tuberomammillary nucleusipsiLhVTM-0.5
Medial part of the ventral subdivision of the tuberomammillary nucleusipsiVTMm-0.5
Posterior subdivision of the tuberomammillary nucleusipsiTuMP-0.5
Dorsomedial hypothalamic nucleusipsiDMHy1
Dorsomedial hypothalamic nucleus large-celled loosely packed portionipsiDMHyLC-0.5
Preoptic anterior regionipsiPAreg2
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx2
Lateral hypothalamic area posterior partipsiLHAp-0.5
Tuberal region of lateral hypothalamusipsiTuLH3
Posterior tuberal lateral hypothalamusipsiPTuLH2
Medial division of the hypothalamusipsiMdH2
Anteroventral periventricular nucleus lateral borderipsiAVPeL1
Dorsal hypothalamic areaipsiDA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Parastriatal nucleusipsiPS1
Posterior hypothalamic areaipsiPHA2
Posteromammillary caudal magnocellular nuclei of the posterior basal hypothalamusipsiPMCMC1
Caudal nuclei of the posterior basal hypothalamusipsiPHAC2
Ventromedial hypothalamic nucleusipsiVMH0.5
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Mediobasal hypothalamus posterior partipsiMeHypoP-0.5
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo2
Paraventricular nucleus lateral parvocellular partipsiPaLp3
Lateral mammillary nucleusipsiLM-0.5
Supramammillar nucleus lateral partipsiSuML-0.5
A8 dopamine cells retrorubral groupipsiRRF3
Perifornical nucleusipsiPeF1
Retrochiasmatic areaipsiRCh1
Paraventricular thalamic nucleus dorsal partipsiPVdo1
Posterior groupipsiPTG1
Zona incertaipsiZI3
Lateral habenular nucleusipsiLHb0.5
Lateral habenular nucleus lateral partipsiLHbL3
Lateral habenular nucleus medial partipsiLHbM1
RetinaipsiRET0
Basolateral amygdaloid nucleusipsiBL0
Basomedial amygdaloid nucleusipsiBM0
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL3
Bed nucleus of the stria terminalis dorsolateral partipsiBSTDL3
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL4
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV3
Bed nucleus of the stria terminalis medial divisionipsiBSTM3
Bed nucleus of the stria terminalis posterolateral partipsiBSTPL3
Bed nucleus of the stria terminalis preoptic partipsiBSTPO3
Central amygdaloid nucleusipsiCe4
Central amygdaloid nucleus lateral divisionipsiCeL2
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus medial division rostral partipsiCeMR2
Anterior amygdaloid areaipsiAA3
Medial amygdaloid nucleusipsiMe2
Intercalated cell chain between Ce BL LAipsiIMcc3
Intercalated masses between intermediate and external fiber capsulesipsiIMie-0.5
Intercalated masses dorsal to the rostral pole of CeipsiIMdr-0.5
Intercalated masses ventral and dorsal to posterior limb of the anterior commissureipsiIMvd-0.5
ClaustrumipsiCl2
Caudal part of claustrumipsiCCl3
Parasubthalamic nucleusipsiPSTh-2
Infralimbic cortexipsiIL1
Infralimbic cortex layer 5 caudal halfipsiILL5ch3
Frontal association cortexipsiFrA0.5
Frontal cortex area 1ipsiFr11
Insular cortexipsiICX3
Agranular insular cortex caudal part layer 5ipsiAICL53
Dysgranular insular cortex layer 5ipsiDIL53
Middle part of the caudal one-third of the dysgranular insular cortexipsiDIvCotMi1
Caudal part of the caudal one-third of the dysgranular insular cortexipsiDIvCotC1
Rostral two-thirds of the dysgranular insular cortexipsiRDIrtt3
Caudal part of the caudal one-third of the granular insular cortexipsiGICotC1
Middle part of the caudal one-third of the granular insular cortexipsiGICotM1
Rostral two-thirds of the granular insular cortexipsiRttGI3
Dorsal granular insular cortexipsiDGI0
Perirhinal cortexipsiA351
Primary somatosensory cortex hindlimb regionipsiS1HL0.5
Dorsal root ganglion C2ipsiDRGC21
Dorsal horn C2ipsiDHC21
Dorsal root ganglion C3ipsiDRGC31
Dorsal horn C3ipsiDHC31
Dorsal root ganglion C4ipsiDRGC41
Dorsal root ganglion C5ipsiDRGC51
Intermediolateral cell column L6ipsiIMLL61
Intermediolateral cell column S1ipsiIMLS11
Intermediolateral cell column S2ipsiIMLS21
Adventitia of the superior dura sinuscontraasds0
Central graycontraCG-0.5
Superior colliculuscontraSC2
Superior colliculus lateral partcontraSCL0.5
Superior colliculus medial partcontramSC0.5
Superior colliculus rostrocaudal partcontraSCrc0.5
Surrounding central tegmental fieldcontraTGACsur3
Substantia nigra compact partcontraSNC-0.5
Substantia nigra lateral partcontraSNL-0.5
Substantia nigra reticular partcontraSNR-0.5
Rostral medial border of the substantia nigra A9contraSNrmb-0.5
Ventral tegmental area rostral partcontraVTAR-0.5
Lateral cerebellar nucleuscontraCERL-0.5
Prepositus nucleuscontraPr-0.5
Reticular systemcontraRF-0.5
Medial reticular formationcontraRFm1
Koelliker Fuse nucleuscontraKF3
Lateral parabrachial nucleus central lateral partcontraLPBCL3
Parabrachial nucleus ventral part lateral portioncontraPBVL3
Lateral reticular nucleuscontraLRt0
Medullary reticular nucleus dorsal partcontraMdDd2
Ventral medullary reticular formationcontraVMurF0
Lateral part of the ventral medullary reticular formationcontraLVMurF0
Parvicellular reticular nucleuscontraPCRt2
Facial nucleus medial partcontra7M0
Mesencephalic trigeminal nucleuscontraMe50
Principal sensory trigeminal nucleuscontraPr51
Spinal trigeminal nucleuscontraSp5nc0
Spinal trigeminal nucleus caudal partcontraSp5C1
Spinal trigeminal nucleus caudal part dorsomedial partcontraSp5CDM-0.5
Spinal trigeminal nucleus interpolar partcontraSp5I1
Spinal trigeminal nucleus oral partcontraSp5O2
Dorsomedial portion of the spinal trigeminal nucleus oral partcontraSp5ODM1
Dorsal raphe nucleuscontraDR3
Dorsal raphe nucleus dorsomedial subdivisioncontraDRdm-0.5
Dorsal raphe nucleus ventromedial subdivisioncontraDRvme-0.5
Median raphe nucleuscontraMnR1
Pontine raphe nucleuscontraPnR1
Inferior olive caudal partcontraIOCa-0.5
Paragigantocellular reticular nucleuscontraPGi0
Tuberomammillary nucleus lateral partcontraTuML-0.5
Lateral half of the ventral subdivision of the tuberomammillary nucleuscontraLhVTM-0.5
Medial part of the ventral subdivision of the tuberomammillary nucleuscontraVTMm-0.5
Posterior subdivision of the tuberomammillary nucleuscontraTuMP-0.5
Posterior tuberal lateral hypothalamuscontraPTuLH0.5
Posteromammillary caudal magnocellular nuclei of the posterior basal hypothalamuscontraPMCMC0
Caudal nuclei of the posterior basal hypothalamuscontraPHAC0.5
Lateral mammillary nucleuscontraLM-0.5
Supramammillar nucleus lateral partcontraSuML-0.5
Paraventricular thalamic nucleus dorsal partcontraPVdo0.5
Lateral habenular nucleus lateral partcontraLHbL2
Lateral habenular nucleus medial partcontraLHbM0.5
RetinacontraRET0
Middle part of the caudal one-third of the dysgranular insular cortexcontraDIvCotMi1
Caudal part of the caudal one-third of the dysgranular insular cortexcontraDIvCotC1
Rostral two-thirds of the dysgranular insular cortexcontraRDIrtt1
Caudal part of the caudal one-third of the granular insular cortexcontraGICotC1
Middle part of the caudal one-third of the granular insular cortexcontraGICotM1
Rostral two-thirds of the granular insular cortexcontraRttGI1
Dorsal root ganglion C2contraDRGC21
Dorsal root ganglion C3contraDRGC31
Dorsal root ganglion C4contraDRGC41
Dorsal root ganglion C5contraDRGC51
Intermediolateral cell column L6contraIMLL60.5
Intermediolateral cell column S1contraIMLS10.5
Intermediolateral cell column S2contraIMLS20.5
Anterior ethmoidal nerveipsiaemn-0.5
Posterior auricular branch of the facial nerveipsi7fnpa0
Buccal division of the facial nerveipsi7bucfn0
Cervical branch of the facial nerveipsi7fnc0
Marginal mandibular branch of the facial nerveipsi7fnmm0
Stylohyoid and digastric branch of the facial nerveipsi7fnsd0
Temporal branch of the facial nerveipsi7fnt0
Zygomatic branch of the facial nerveipsi7fnz0
Hypoglossal nerveipsi12P0
Medial branch of the lacrimal nerveipsiPNSMeLa-0.5
Masseteric nerveipsimass2
Main branch of the masseteric nerveipsimbmass3
Buccal nerveipsibucc0
Buccal nervecontrabucc0
Corpuscle region of incisal papillaipsiOrgCIP0
Maxillary 2nd molaripsiOrg2molmax0
2nd maxillary molar pulpipsiOrg2molp0
Maxillary 3rd molaripsiOrg3molmax0
Tooth pulp of the maxillary first molaripsiOrgOTPMfM0
Tooth pulp of the second maxillary molarsipsiOrgTopmaxs0
Mandibular molar toothipsiOrgManT0
TongueipsiOrgOCT-10
Corpuscle region of incisal papillacontraOrgCIP0
Intervibrissal furipsiiVFu0
Vibrissal follicle complexipsiVFC-0.5
Temporomandibular jointipsiOrgJOiTeMa0
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Jaw muscle spindlesipsiMuscJawS1
Musculus masseteripsiMuscMass3
Muscle spindles of the masseter muscleipsiMuscMassSpi-0.5
Temporal muscleipsiMuscT-0.5
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10
Jaw muscle spindlescontraMuscJawS1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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