University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Posterior hypothalamic nucleus caudal part left


Abbreviation
PHCa
Color       
Superior regionsPosterior hypothalamic nucleus

SynonymsAbbr.Language
Posterior hypothalamic nucleus caudal partPHCaEng
Caudal part of posterior hypothalamic nucleus Eng

Output to

NameSideAbbr.WeightDetails
Nuclei of the lateral lemniscusipsiNLL0
Periaqueductal grayipsiPAG2
Red nucleusipsiR0
Inferior colliculusipsiICOL0
Superior colliculusipsiSC1.5
Substantia nigra compact partipsiSNC2
Substantia nigra reticular partipsiSNR0
Ventral tegmental area A10ipsiVTA3
Interfascicular nucleusipsiIF0
Peripeduncular nucleusipsiPP2
Retrorubral nucleusipsiRR1.5
Laterodorsal tegmental nucleusipsiLDTg1.5
Ventral tegmental nucleusipsiVTg0
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg1
PonsipsiP0
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC1
Nucleus incertusipsiNI1
Pons caudal partipsiPca2
Pons oral partipsiPor2
Reticulotegmental nucleus of the ponsipsiRtTg0
Prepositus nucleusipsiPr0
Mesencephalic reticular formationipsiMRF2
Cuneiforme nucleusipsiCnF1
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1.5
Gigantocellular reticular nucleusipsiGi2
Gigantocellular reticular nucleus alpha partipsiGiA1.5
Gigantocellular reticular nucleus ventral partipsiGiV1
Lateral reticular nucleusipsiLRt1
Medial subnucleus reticularis ventralisipsiMSRV1.5
Medullary reticular nucleus dorsal partipsiMdDd1
Parvicellular reticular nucleusipsiPCRt1.5
Nucleus of the trapezoid bodyipsiTz0
Ambiguus nucleusipsiAmb0
Abducens nucleusipsi60
Facial nucleusipsi71
Hypoglossal nucleusipsi12S0
Motor trigeminal nucleusipsiMo50
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleusipsiSp5nc0
Dorsal cochlear nucleusipsiDC0
Ventral cochlear nucleusipsiVC0
Superior vestibular nucleusipsiSuVe0
Medial vestibular nucleusipsiMVe0
Lateral vestibular nucleusipsiLVe0
Inferior vestibular nucleusipsiIVN0
Nucleus of the solitary tractipsiSol0
Dorsal motor nucleus of vagusipsi100
Dorsal raphe nucleusipsiDR1
Central raphe nucleusipsiCRN1
Medial raphe nucleusipsiMeR1
Pontine raphe nucleusipsiPnR1.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb1.5
Raphe pallidus nucleusipsiRPa2
Caudal ventrolateral medullaipsiCVLM1
Rostral ventrolateral medullaipsiRVLM2
Cuneate nucleusipsiCu0
Inferior oliveipsiIO2
Superior oliveipsiSuOLi0
Lateral paragigantocellular nucleusipsiLPGi1
Endopiriform systemipsiEnN0
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Nucleus of the vertical limb of the diagonal bandipsiVDB2
Medial septal nucleusipsiMS3
Substantia innominataipsiSI1
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA2
Magnocellular preoptic nucleusipsiMCPO1
Medial preoptic nucleusipsiMPO0
Median preoptic nucleusipsiMnPO1
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR3
Lateral hypothalamic nucleusipsiLHN3
Anterior hypothalamic nucleusipsiAHn3
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Ventromedial hypothalamic nucleusipsiVMH0
Paraventricular hypothalamic nucleusipsiPa1
Suprachiasmatic nucleusipsiSCh0
Supraoptic nucleus [Supraoptic region]ipsiSO1
Mammillary bodyipsiCMAM0
Premammillary nucleus dorsal partipsiPMD1
Premammillary nucleus ventral partipsiPMV0
Supramammillar nucleusipsiSuM1
Anterodorsal thalamic nucleusipsiAD0
Anteromedial thalamic nucleusipsiAM0
Anteroventral thalamic nucleusipsiAV0
Interoanteromedial thalamic nucleusipsiIAM0
Central medial thalamic nucleusipsiCM2
Centrolateral thalamic nucleusipsiCL2
Paracentral thalamic nucleusipsiPC2
Parafascicular thalamic nucleusipsiPF3
Rhomboid thalamic nucleusipsiRh1
Posterior thalamic nuclear groupipsiPo1
Mediodorsal thalamic nucleusipsiMD1
Intermediodorsal thalamic nucleusipsiIMD3
Submedius thalamic nucleusipsiSub1
Paraventricular thalamic nucleus anterior partipsiPVA3
Paraventricular thalamic nucleus posterior partipsiPVP3
Reuniens thalamic nucleusipsiRe3
Ventrolateral thalamic nucleusipsiVL2
Ventral posterolateral thalamic nucleusipsiVPL0
Ventral posteromedial thalamic nucleusipsiVPM0
Ventromedial thalamic nucleusipsiVM2
Lateral posterior thalamic nucleusipsiLP3
Laterodorsal thalamic nucleusipsiLD3
Reticular thalamic nucleusipsiRt0
Subparafascicular thalamic nucleusipsiSPF0
Zona incertaipsiZI3
Nucleus of the fields of ForelipsiF3
Lateral habenular nucleusipsiLHb0
Medial habenular nucleusipsiMHb0
Anterior pretectal nucleusipsiAPT1.5
Medial pretectal nucleusipsiMPT1
Posterior pretectal nucleusipsiPPT1.5
Basolateral amygdaloid nucleusipsiBL0
Basomedial amygdaloid nucleusipsiBM1
Lateral amygdaloid nucleusipsiLA1
Bed nucleus of the stria terminalisipsiBST2
Central amygdaloid nucleusipsiCe3
Anterior amygdaloid areaipsiAA0
Cortical amygdaloid nucleusipsiCAn1
Posterior amygdaloid nucleusipsiCOAp0
Medial amygdaloid nucleusipsiMe1
ClaustrumipsiCl0
Globus pallidusipsiGP0
Ventral pallidumipsiVP1
Accumbens nucleusipsiAc1
Caudate putamenipsiCPu0
Dentate gyrusipsiDG0
Ammon hornipsiAmH0
SubiculumipsiS0
Septohippocampal nucleusipsiSHi1
Entorhinal cortexipsiEnt0
Piriform cortexipsiPir0
Retrosplenial agranular cortexipsiRSA0
Anterior cingulate cortexipsiACC1
Posterior cingulate cortexipsiPCC0
Prelimbic cortexipsiPrL1
Frontal association cortex posterior partipsiFrAp1
Parietal association cortexipsiPtA1
Temporal association cortex 1ipsiTeA0
Insular cortexipsiICX0
Agranular insular cortexipsiAI0
Dysgranular insular cortexipsiDI0
Granular insular cortexipsiGI0
Perirhinal cortexipsiA351
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm1
Visual regionsipsiVR0
Lateral orbital cortexipsiLO0
Nucleus of the posterior commissureipsiPCom3
Lateral geniculate complexipsiLG1
Interpeduncular nucleusipsiIP0
Olfactory tubercleipsiTuO0
Lateral septal nucleus dorsal partipsiLSD2
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus ventral partipsiLSV3
Triangular septal nucleusipsiTS1
Septohypothalamic nucleusipsiSHy1
Nuclei of the lateral lemniscuscontraNLL0
Periaqueductal graycontraPAG1
Red nucleuscontraR0
Inferior colliculuscontraICOL0
Superior colliculuscontraSC0.5
Substantia nigra compact partcontraSNC0.5
Substantia nigra reticular partcontraSNR0
Interfascicular nucleuscontraIF0
Peripeduncular nucleuscontraPP1
Retrorubral nucleuscontraRR0.5
Laterodorsal tegmental nucleuscontraLDTg0.5
Ventral tegmental nucleuscontraVTg0
Dorsal tegmental nucleuscontraDTg0.5
Pedunculopontine tegmental nucleuscontraPPTg0.5
PonscontraP0
Barringtons nucleuscontraBar1
Locus coeruleuscontraLC0.5
Nucleus incertuscontraNI0.5
Pons caudal partcontraPca1
Pons oral partcontraPor1
Reticulotegmental nucleus of the ponscontraRtTg0
Prepositus nucleuscontraPr0
Mesencephalic reticular formationcontraMRF1
Cuneiforme nucleuscontraCnF0.5
Koelliker Fuse nucleuscontraKF0.5
Lateral parabrachial nucleuscontraLPB0.5
Parabrachial nucleus medialcontraPBnMe0.5
Gigantocellular reticular nucleuscontraGi1
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Gigantocellular reticular nucleus ventral partcontraGiV0.5
Lateral reticular nucleuscontraLRt0.5
Medial subnucleus reticularis ventraliscontraMSRV0.5
Medullary reticular nucleus dorsal partcontraMdDd0.5
Parvicellular reticular nucleuscontraPCRt0.5
Nucleus of the trapezoid bodycontraTz0
Ambiguus nucleuscontraAmb0
Abducens nucleuscontra60
Facial nucleuscontra70.5
Hypoglossal nucleuscontra12S0
Motor trigeminal nucleuscontraMo50
Principal sensory trigeminal nucleuscontraPr50
Spinal trigeminal nucleuscontraSp5nc0
Dorsal cochlear nucleuscontraDC0
Ventral cochlear nucleuscontraVC0
Superior vestibular nucleuscontraSuVe0
Medial vestibular nucleuscontraMVe0
Lateral vestibular nucleuscontraLVe0
Inferior vestibular nucleuscontraIVN0
Nucleus of the solitary tractcontraSol0
Dorsal motor nucleus of vaguscontra100
Dorsal raphe nucleuscontraDR0.5
Central raphe nucleuscontraCRN0.5
Medial raphe nucleuscontraMeR0.5
Pontine raphe nucleuscontraPnR0.5
Raphe magnus nucleuscontraRMg1
Raphe obscurus nucleuscontraROb0.5
Raphe pallidus nucleuscontraRPa1
Caudal ventrolateral medullacontraCVLM0.5
Rostral ventrolateral medullacontraRVLM1
Cuneate nucleuscontraCu0
Inferior olivecontraIO1
Superior olivecontraSuOLi0
Lateral paragigantocellular nucleuscontraLPGi0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Anterior pretectal nucleuscontraAPT0.5
Posterior pretectal nucleuscontraPPT0.5
Nucleus of the posterior commissurecontraPCom0.5
Interpeduncular nucleuscontraIP0

Input from

NameSideAbbr.WeightDetails
Dorsomedial hypothalamic nucleusipsiDMHy2
Dorsomedial hypothalamic nucleuscontraDMHy2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications