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Rat connectome



Posterior hypothalamic nucleus rostral part left


Abbreviation
PHRo
Color       
Superior regionsPosterior hypothalamic nucleus

SynonymsAbbr.Language
Posterior hypothalamic nucleus rostral partPHRoEng
Rostral part of posterior hypothalamic nucleus Eng

SubregionsSide
Posterior hypothalamic nucleus rostral poleleft

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Nuclei of the lateral lemniscusipsiNLL0
Periaqueductal grayipsiPAG2
Periaqueductal gray rostrolateral partipsiPAGRL2
Red nucleusipsiR0
Inferior colliculusipsiICOL0
Superior colliculusipsiSC1
Substantia nigra compact partipsiSNC1
Substantia nigra reticular partipsiSNR0
Ventral tegmental area A10ipsiVTA2
Interfascicular nucleusipsiIF2
Peripeduncular nucleusipsiPP2
Retrorubral nucleusipsiRR1.5
Laterodorsal tegmental nucleusipsiLDTg1.5
Ventral tegmental nucleusipsiVTg1
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg1
PonsipsiP0
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC1
Nucleus incertusipsiNI1
Pons caudal partipsiPca2
Pons oral partipsiPor2
Reticulotegmental nucleus of the ponsipsiRtTg0
Prepositus nucleusipsiPr0
Mesencephalic reticular formationipsiMRF2
Cuneiforme nucleusipsiCnF1
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi1.5
Gigantocellular reticular nucleus alpha partipsiGiA1
Gigantocellular reticular nucleus ventral partipsiGiV0
Lateral reticular nucleusipsiLRt0
Medial subnucleus reticularis ventralisipsiMSRV0
Medullary reticular nucleus dorsal partipsiMdDd0
Parvicellular reticular nucleusipsiPCRt1
Nucleus of the trapezoid bodyipsiTz0
Ambiguus nucleusipsiAmb0
Abducens nucleusipsi60
Facial nucleusipsi70
Hypoglossal nucleusipsi12S0
Motor trigeminal nucleusipsiMo50
Principal sensory trigeminal nucleusipsiPr50
Spinal trigeminal nucleusipsiSp5nc0
Dorsal cochlear nucleusipsiDC0
Ventral cochlear nucleusipsiVC0
Superior vestibular nucleusipsiSuVe0
Medial vestibular nucleusipsiMVe0
Lateral vestibular nucleusipsiLVe0
Inferior vestibular nucleusipsiIVN0
Nucleus of the solitary tractipsiSol0
Dorsal motor nucleus of vagusipsi101.5
Dorsal raphe nucleusipsiDR1
Central raphe nucleusipsiCRN1
Medial raphe nucleusipsiMeR1
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg1
Raphe nuclei rostral partipsiRANR-0.5
Raphe obscurus nucleusipsiROb0
Raphe pallidus nucleusipsiRPa0
Caudal ventrolateral medullaipsiCVLM0
Rostral ventrolateral medullaipsiRVLM0
Cuneate nucleusipsiCu0
Inferior oliveipsiIO0
Superior oliveipsiSuOLi0
Lateral paragigantocellular nucleusipsiLPGi0
Endopiriform systemipsiEnN0
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Substantia innominataipsiSI1
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA2
Magnocellular preoptic nucleusipsiMCPO1
Medial preoptic nucleusipsiMPO0
Median preoptic nucleusipsiMnPO0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR3
Lateral hypothalamic nucleusipsiLHN3
Anterior hypothalamic nucleusipsiAHn3
Dorsal hypothalamic areaipsiDA3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Ventromedial hypothalamic nucleusipsiVMH0
Paraventricular hypothalamic nucleusipsiPa1
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
Suprachiasmatic nucleusipsiSCh0
Supraoptic nucleus [Supraoptic region]ipsiSO0
Mammillary bodyipsiCMAM1
Premammillary nucleus dorsal partipsiPMD0
Premammillary nucleus ventral partipsiPMV0
Supramammillar nucleusipsiSuM2
Anterodorsal thalamic nucleusipsiAD0
Anteromedial thalamic nucleusipsiAM0
Anteroventral thalamic nucleusipsiAV0
Interoanteromedial thalamic nucleusipsiIAM0
Central medial thalamic nucleusipsiCM3
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC3
Parafascicular thalamic nucleusipsiPF3
Rhomboid thalamic nucleusipsiRh1
Posterior thalamic nuclear groupipsiPo1
Mediodorsal thalamic nucleusipsiMD1
Intermediodorsal thalamic nucleusipsiIMD3
Submedius thalamic nucleusipsiSub0
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus anterior partipsiPVA3
Paraventricular thalamic nucleus posterior partipsiPVP3
Reuniens thalamic nucleusipsiRe3
Ventrolateral thalamic nucleusipsiVL1
Ventral posterolateral thalamic nucleusipsiVPL0
Ventral posteromedial thalamic nucleusipsiVPM0
Ventromedial thalamic nucleusipsiVM2
Lateral posterior thalamic nucleusipsiLP1
Laterodorsal thalamic nucleusipsiLD2
Reticular thalamic nucleusipsiRt0
Subparafascicular thalamic nucleusipsiSPF0
Zona incertaipsiZI3
Nucleus of the fields of ForelipsiF3
Lateral habenular nucleusipsiLHb0
Medial habenular nucleusipsiMHb0
Anterior pretectal nucleusipsiAPT1
Medial pretectal nucleusipsiMPT1
Posterior pretectal nucleusipsiPPT1
Basolateral amygdaloid nucleusipsiBL1
Basomedial amygdaloid nucleusipsiBM2
Lateral amygdaloid nucleusipsiLA2
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV-0.5
Central amygdaloid nucleusipsiCe3
Anterior amygdaloid areaipsiAA1
Cortical amygdaloid nucleusipsiCAn1
Posterior amygdaloid nucleusipsiCOAp0
Medial amygdaloid nucleusipsiMe2
ClaustrumipsiCl1
Globus pallidusipsiGP1
Ventral pallidumipsiVP1
Accumbens nucleusipsiAc0
Caudate putamenipsiCPu1
Dentate gyrusipsiDG0
Ammon hornipsiAmH1
SubiculumipsiS0
Septohippocampal nucleusipsiSHi1
Entorhinal cortexipsiEnt1
Piriform cortexipsiPir1
Retrosplenial agranular cortexipsiRSA0
Cingulate cortexipsiCg2
Anterior cingulate cortexipsiACC2
Posterior cingulate cortexipsiPCC0
Prelimbic cortexipsiPrL2
Frontal association cortex posterior partipsiFrAp1
Parietal association cortexipsiPtA2
Temporal association cortex 1ipsiTeA1
Insular cortexipsiICX3
Agranular insular cortexipsiAI2
Dysgranular insular cortexipsiDI3
Granular insular cortexipsiGI3
Perirhinal cortexipsiA353
Lateral agranular prefrontal cortexipsiAGl3
Medial agranular prefrontal cortexipsiAGm2
Primary somatosensory cortexipsiS12
Visual regionsipsiVR2
Lateral orbital cortexipsiLO1
Nucleus of the posterior commissureipsiPCom3
Lateral geniculate complexipsiLG1
Interpeduncular nucleusipsiIP0
Olfactory tubercleipsiTuO0
Lateral septal nucleusipsiLS-0.5
Lateral septal nucleus dorsal partipsiLSD3
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus ventral partipsiLSV3
Triangular septal nucleusipsiTS1
Septohypothalamic nucleusipsiSHy2
Nuclei of the lateral lemniscuscontraNLL0
Periaqueductal graycontraPAG1
Red nucleuscontraR0
Inferior colliculuscontraICOL0
Superior colliculuscontraSC0.5
Substantia nigra compact partcontraSNC0.5
Substantia nigra reticular partcontraSNR0
Interfascicular nucleuscontraIF0
Peripeduncular nucleuscontraPP1
Retrorubral nucleuscontraRR0.5
Laterodorsal tegmental nucleuscontraLDTg0.5
Ventral tegmental nucleuscontraVTg0.5
Dorsal tegmental nucleuscontraDTg0.5
Pedunculopontine tegmental nucleuscontraPPTg0.5
PonscontraP0
Barringtons nucleuscontraBar1
Locus coeruleuscontraLC0.5
Nucleus incertuscontraNI0.5
Pons caudal partcontraPca1
Pons oral partcontraPor1
Reticulotegmental nucleus of the ponscontraRtTg0
Prepositus nucleuscontraPr0
Mesencephalic reticular formationcontraMRF1
Cuneiforme nucleuscontraCnF0.5
Koelliker Fuse nucleuscontraKF0.5
Lateral parabrachial nucleuscontraLPB0.5
Parabrachial nucleus medialcontraPBnMe0.5
Gigantocellular reticular nucleuscontraGi0.5
Gigantocellular reticular nucleus alpha partcontraGiA0.5
Gigantocellular reticular nucleus ventral partcontraGiV0
Lateral reticular nucleuscontraLRt0
Medial subnucleus reticularis ventraliscontraMSRV0
Medullary reticular nucleus dorsal partcontraMdDd0
Parvicellular reticular nucleuscontraPCRt0.5
Nucleus of the trapezoid bodycontraTz0
Ambiguus nucleuscontraAmb0
Abducens nucleuscontra60
Facial nucleuscontra70
Hypoglossal nucleuscontra12S0
Motor trigeminal nucleuscontraMo50
Principal sensory trigeminal nucleuscontraPr50
Spinal trigeminal nucleuscontraSp5nc0
Dorsal cochlear nucleuscontraDC0
Ventral cochlear nucleuscontraVC0
Superior vestibular nucleuscontraSuVe0
Medial vestibular nucleuscontraMVe0
Lateral vestibular nucleuscontraLVe0
Inferior vestibular nucleuscontraIVN0
Nucleus of the solitary tractcontraSol0
Dorsal motor nucleus of vaguscontra100
Dorsal raphe nucleuscontraDR0.5
Central raphe nucleuscontraCRN0.5
Medial raphe nucleuscontraMeR0.5
Pontine raphe nucleuscontraPnR0.5
Raphe magnus nucleuscontraRMg0.5
Raphe obscurus nucleuscontraROb0
Raphe pallidus nucleuscontraRPa0
Caudal ventrolateral medullacontraCVLM0
Rostral ventrolateral medullacontraRVLM0
Cuneate nucleuscontraCu0
Inferior olivecontraIO0
Superior olivecontraSuOLi0
Lateral paragigantocellular nucleuscontraLPGi0
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Anterior pretectal nucleuscontraAPT0.5
Posterior pretectal nucleuscontraPPT0.5
Nucleus of the posterior commissurecontraPCom0.5
Interpeduncular nucleuscontraIP0

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleus caudal partipsiDRC3
Premammillary nucleus dorsal partipsiPMD2
Dorsal raphe nucleus caudal partcontraDRC2.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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