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Rat connectome



Anterior piriform cortex left


Abbreviation
APIRC
Color       
Superior regionsPiriform cortex

SynonymsAbbr.Language
 APC 
Anterior piriform cortexAPIRCEng

SubregionsSide
Anterior piriform cortex lateral partleft
Anterior piriform cortex layersleft
Anterior piriform cortex medial partleft
Anteromedial piriform cortexleft
Dorsal anterior piriform cortexleft
Dorsal blade of the anterior piriform cortexleft
Dorsalrostral third of the anterior piriform cortexleft
Dorsocaudal part of the anterior piriform cortexleft
Ventral anterior piriform cortexleft
Ventrorostral anterior piriform cortexleft
Anterior piriform cortex ventromedial partleft
Anterior piriform cortex rostral partleft
Anterior piriform cortex caudal partleft
Anterior piriform cortex ventrolateral partleft

Output to

NameSideAbbr.WeightDetails
Endopiriform systemipsiEnN-0.5
Dorsal endopiriform nucleusipsiDEn2
Ventral endopiriform nucleusipsiVEn1.5
Tenia tectaipsiTT1.5
Ventral tenia tectaipsiVTT1
Mediodorsal thalamic nucleus central partipsiMDC2
Amygdalopiriform transition areaipsiAPir3
Anterior cortical amygdaloid nucleusipsiACo-0.5
Nucleus of the lateral olfactory tractipsiLOT-0.5
Periamygdaloid complexipsiPAC-0.5
Lateral nucleus accumbensipsiAcl2
Dorsal hippocampus dentate gyrusipsiDDG-0.5
Ventral hippocampus dentate gyrusipsiVDG-0.5
Entorhinal cortexipsiEnt1
Dorsolateral entorhinal cortexipsiDLEnt-0.5
Lateral entorhinal cortexipsiLEnt-0.5
Lateral entorhinal cortex ventral partipsiVLEA3
Lateral entorhinal cortex ventromedial partipsiVMEAL-3
Piriform cortexipsiPir1.5
Anterior piriform cortexipsiAPIRC-0.5
Anterior piriform cortex lateral partipsiAPRCLP0
Anterior piriform cortex layer 1aipsiAPIRCPIRlL1a0.5
Anterior piriform cortex layer 1bipsiAPIRCPIRlL1b3
Anterior piriform cortex layer 2ipsiAPIRCPIRlL20.5
Anterior piriform cortex layer 3ipsiAPIRCPIRlL30.5
Anterior piriform cortex medial partipsiAPIRCMP0
Lateral piriform cortexipsiPirLa-0.5
Posterior piriform cortexipsiPPIRC-0.5
Posterior piriform cortex layer 2ipsiPOPiL21
Posterior piriform cortex layer 3ipsiPOPiL31.5
Posterior piriform cortex layer 1bipsiPPIRCL1b3
Posterior piriform cortex layer 1aipsiPPIRCL1a0.5
Infralimbic cortex ventral partipsiILv1
Insular cortexipsiICX1
Agranular insular cortex dorsal part superficial layersipsiAIDsL2
Agranular insular cortex ventral partipsiAIV-0.5
Perirhinal cortexipsiA350
Anterior commissureipsiac-2
Accessory olfactory bulb rostral partipsiAOBr-0.5
Olfactory bulb A16ipsiMOB-0.5
Anterior dorsolaterally olfactory bulbipsiMOBDLA2
Lateral olfactory bulbipsiMOBL3
Olfactory bulb A16 rostral partipsiMOBR-2
External plexiform layer of the olfactory bulbipsiOBepl1
Glomerular layer of the olfactory bulbipsiOBglo2
Tufted cells of the glomerular layer of the olfactory bulbipsiOBgloTC1
Granular cell layer of the olfactory bulbipsiOBgra2.5
Lateral granule cell layer of the olfactory bulbipsiOBgraL-2
Rostral part of the lateral granule cell layer of the olfactory bulbipsiOBgraRL-2
Medial granule cell layer of the olfactory bulbipsiOBgraM-2
Cellular layers of the bottom of the granule cell layer of the olfactory bulbipsiOBgraB1
Deep granular cell layer of the olfactory bulbipsiOBgrad-0.5
Mitral cell layer of the olfactory bulbipsiMi3
Olfactory cortex layer 1bipsiONL1b3
Juxtaglomerular layer of the olfactory bulbipsiOcxLJU1
Anterior olfactory nucleusipsiAON2
Anterior olfactory nucleus dorsal partipsiAONd-0.5
Anterior olfactory nucleus dorsal part deep portion of layer 1ipsiAONddL13
Anterior olfactory nucleus dorsal part superficial layer 1ipsiAONdL1a0.5
Anterior olfactory nucleus dorsal part layer 2ipsiAONdL21
Anterior olfactory nucleus external partipsiAONe-0.5
Anterior olfactory nucleus lateral partipsiAONl2
Anterior olfactory nucleus medial partipsiAONm1
Lateral olfactory tractipsilot0
Medial olfactory bulbipsiMOBM3
Olfactory peduncleipsiOLP-0.5
Olfactory tubercleipsiTuO3
Olfactory tubercle lateral partipsiTuOL3
Olfactory tubercle densocellular layeripsiTuOd1
Olfactory tubercle plexiform layeripsiTuOLa13
Olfactory tubercle polymorph layeripsiTuOpo1
Olfactory tubercle medial partipsiTuOMP1.5
Medullary reticular nucleus dorsal partcontraMdDd1
Dorsal endopiriform nucleuscontraDEn1
Ventral tenia tectacontraVTT0
Anterior cortical amygdaloid nucleuscontraACo-0.5
Nucleus of the lateral olfactory tractcontraLOT-0.5
Periamygdaloid complexcontraPAC-0.5
Entorhinal cortexcontraEnt-0.5
Lateral entorhinal cortexcontraLEnt-0.5
Anterior piriform cortexcontraAPIRC1
Posterior piriform cortexcontraPPIRC-0.5
Agranular insular cortex dorsal part superficial layerscontraAIDsL0.5
Anterior commissurecontraac0
Lateral olfactory bulbcontraMOBL0
External plexiform layer of the olfactory bulbcontraOBepl1
Glomerular layer of the olfactory bulbcontraOBglo2
Lateral granule cell layer of the olfactory bulbcontraOBgraL0
Medial granule cell layer of the olfactory bulbcontraOBgraM0
Olfactory cortex layer 1bcontraONL1b3
Anterior olfactory nucleuscontraAON0.5
Anterior olfactory nucleus external partcontraAONe0
Anterior olfactory nucleus lateral partcontraAONl0
Medial olfactory bulbcontraMOBM0

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm1
Dorsal raphe nucleus lateral wingipsiDRlw1
Dorsal raphe nucleus ventral partipsiDRV1
Middle region of the medioventral dorsal raphe nucleusipsiDRvmeMi3
Median raphe nucleusipsiMnR1
B9 serotonin cellsipsiB91.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Ventral tenia tectaipsiVTT4
Central medial thalamic nucleus rostral partipsiCMr0
Rhomboid thalamic nucleusipsiRh2
Reuniens thalamic nucleusipsiRe3
Reuniens thalamic nucleus medial partipsiReMe2
Reuniens thalamic nucleus ventral part middle portionipsiReVM1.5
Basal nucleus magnocellular partipsiBmc0.5
Posterior basolateral nucleus intermediate subdivisionipsiBLPi1
Ventral basolateral nucleusipsiBLV2
Basomedial nucleus magnocellular divisionipsiABmc2
Basomedial nucleus parvicellular divisionipsiABpc1
Dorsolateral part of the lateral nucleusipsiLaDL1
Ventromedial part of the lateral nucleusipsiLaVM1
Amygdalopiriform transition areaipsiAPir1
Anterior amygdaloid areaipsiAA-0.5
Anterior cortical amygdaloid nucleusipsiACo1
Posterolateral cortical nucleusipsiPLCo1
Lateral entorhinal cortexipsiLEnt3
Lateral entorhinal cortex layer 2ipsiLEntL2-0.5
Lateral entorhinal cortex layer 3ipsiLEntL3-0.5
Lateral entorhinal cortex layer 4ipsiLEntL43
Lateral entorhinal cortex layer 5ipsiLEntL53
Piriform cortexipsiPir-0.5
Anterior piriform cortexipsiAPIRC-0.5
Piriform cortex layer 2ipsiPirL2-0.5
Piriform cortex layer 3ipsiPirL3-0.5
Posterior piriform cortexipsiPPIRC1
Limbic regionsipsiLR2
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL2
Agranular insular cortexipsiAI-0.5
Agranular insular cortex dorsal partipsiAID1
Agranular insular cortex posterior partipsiAIP2
Agranular insular cortex ventral partipsiAIV3
Perirhinal cortexipsiA35-0.5
Dorsal peduncular cortexipsiDP2
Lateral orbital cortexipsiLO3
Medial orbital cortexipsiMO2
Ventrolateral orbital areaipsiVLO3
Olfactory bulb A16ipsiMOB-0.5
Anterior dorsolaterally olfactory bulb A16ipsiMOBadL2
Tufted cells of the glomerular layer of the olfactory bulbipsiOBgloTC1
Anterior olfactory nucleusipsiAON-0.5
Olfactory tubercleipsiTuO-0.5
Dorsal raphe nucleuscontraDR0.5
Median raphe nucleuscontraMnR1
B9 serotonin cellscontraB91.5
Posterior basolateral nucleus intermediate subdivisioncontraBLPi1
Ventral basolateral nucleuscontraBLV1
Basomedial nucleus magnocellular divisioncontraABmc1
Basomedial nucleus parvicellular divisioncontraABpc1
Dorsolateral part of the lateral nucleuscontraLaDL1
Ventromedial part of the lateral nucleuscontraLaVM1
Amygdalopiriform transition areacontraAPir1
Anterior cortical amygdaloid nucleuscontraACo1
Posterolateral cortical nucleuscontraPLCo1
Lateral entorhinal cortex layer 2contraLEntL2-0.5
Lateral entorhinal cortex layer 3contraLEntL3-0.5
Lateral entorhinal cortex layer 4contraLEntL4-0.5
Lateral entorhinal cortex layer 5contraLEntL5-0.5
Piriform cortexcontraPir0.5
Anterior piriform cortexcontraAPIRC1
Orbital cortexcontraOrC1
Lateral orbital cortexcontraLO2
Ventrolateral orbital areacontraVLO2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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