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Rat connectome



Medial division of the hypothalamus right


Abbreviation
MdH
Color       
Superior regionsMediobasal hypothalamus

SynonymsAbbr.Language
Medial hypothalamus  
Medial division of the hypothalamusMdHEng
Medial hypothalamic region Eng
Middle part of the mediobasal hypothalamus Eng
Medial aspects of the hypothalamus Eng

SubregionsSide
Medial preoptic anterior regionright
Posterior region [Medial division of the hypothalamus]right
Rostral medial hypothalamusright
Medial part of the medial division of the hypothalamusright
Sexually dimorphic nuclei of the hypothalamic medial zoneright
Medial division of the hypothalamus cell clusters around blood vesselsright
Medial division of the hypothalamus dorsomedial lateral partright
Medial division of the hypothalamus ventromedial lateral partright
Medial division of the hypothalamus posterior lateral partright
Caudomedial hypothalamusright

Output to

NameSideAbbr.WeightDetails
Ventral tegmental area A10contraVTA1
Dorsolateral periaqueductal grayipsiDLPAG-0.5
Dorsomedial periaqueductal grayipsiDMPAG-0.5
Lateral periaqueductal grayipsiLPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Ventral tegmental area A10ipsiVTA3
Ventral tegmental nucleusipsiVTg-0.5
Paraflocculus ventral partipsiPFlv1
FlocculusipsiFl1
Pontine reticular nucleus central partipsiNRTPc-0.5
Parabrachial nucleusipsiPB1
Lateral parabrachial nucleusipsiLPB1
Mesencephalic trigeminal nucleusipsiMe52
Nucleus of the solitary tractipsiSol1
Dorsal motor nucleus of vagusipsi10-0.5
Dorsal raphe nucleusipsiDR-0.5
Median raphe nucleusipsiMnR-0.5
Medial raphe nucleusipsiMeR-0.5
Superior central raphe nucleusipsiCS-0.5
Substantia innominata rostral aspectipsiSIr0.5
Ventrolateral preoptic nucleusipsiVLPO-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO2
Mediodorsal thalamic nucleusipsiMD-0.5
Nucleus reuniens rostral divisionipsiRER-0.5
Lateral habenular nucleus lateral partipsiLHbL1
Amygdaloid complexipsiAC-0.5
Basolateral amygdaloid nucleusipsiBL-0.5
Lateral entorhinal cortexipsiLEnt-0.5
Piriform cortexipsiPir-0.5
Olfactory peduncleipsiOLP-0.5
Olfactory tubercleipsiTuO-0.5

Input from

NameSideAbbr.WeightDetails
Peduncularpontine nucleuscontraPPN-0.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
Mesencephalic reticular formationcontraMRF3
Parabrachial nucleus medialcontraPBnMe1
Spinal trigeminal nucleus caudal partcontraSp5C1
Trigeminal subnucleus caudaliscontra5SSC0.5
Lateral preoptic lateral hypothalamic continuumcontraLPOLH2
Medial preoptic areacontraMPA2
Spinal cordcontraMES3
Intermediate zone of spinal cordcontraIzMES3
Lateral spinal nucleuscontraMESLn3
Spinal cord lamina 10contraMESL103
Spinal cord lamina 3 lateral partcontraMESL3L3
Spinal cord lamina 4 lateral partcontraMESL4L3
Spinal cord lamina 1contraMESL13
Cervical segment 1contraCS13
Intermediomedial cell column C1contraIMMC11
Lateral spinal nucleus C1contraLSpC12
Area X C1contraSCL10C12
Deep dorsal horn C1contraDDHC13
Spinal cord layer 5 C1contraSCL5C13
Spinal cord layer 6 C1contraSCL6C13
Deep dorsal horn lateral reticulated area C1contraDDHLRAC13
Spinal cord layer 3 C1contraSCL3C11
Superficial dorsal horn C1contraSDHC11
Spinal cord layer 1 C1contraSCL1C13
Spinal cord layer 2 C1contraSCL2C14
Intermediate zone C1contraizVHC11
Cervical segment 2contraCS23
Intermediomedial cell column C2contraIMMC21
Lateral spinal nucleus C2contraLSpC22
Area X C2contraSCL10C22
Deep dorsal horn C2contraDDHC23
Spinal cord layer 5 C2contraSCL5C23
Spinal cord layer 6 C2contraSCL6C23
Deep dorsal horn lateral reticulated area C2contraDDHLRAC23
Spinal cord layer 3 C2contraSCL3C21
Superficial dorsal horn C2contraSDHC21
Spinal cord layer 1 C2contraSCL1C23
Spinal cord layer 2 C2contraSCL2C24
Intermediate zone C2contraizVHC21
Cervical segment 3contraCS33
Intermediomedial cell column C3contraIMMC31
Lateral spinal nucleus C3contraLSpC32
Area X C3contraSCL10C31.5
Spinal cord layer 5 C3contraSCL5C33
Spinal cord layer 1 C3contraSCL1C33
Spinal cord layer 2 C3contraSCL2C34
Cervical segment 4contraCS43
Intermediomedial cell column C4contraIMMC41
Lateral spinal nucleus C4contraLSpC42
Area X C4contraSCL10C41.5
Deep dorsal horn C4contraDDHC42
Spinal cord layer 5 C4contraSCL5C43
Spinal cord layer 6 C4contraSCL6C42
Deep dorsal horn lateral reticulated area C4contraDDHLRAC42
Spinal cord layer 3 C4contraSCL3C40.5
Superficial dorsal horn C4contraSDHC41
Spinal cord layer 1 C4contraSCL1C43
Spinal cord layer 2 C4contraSCL2C44
Intermediate zone C4contraizVHC40.5
Cervical segment 5contraCS53
Intermediomedial cell column C5contraIMMC51
Lateral spinal nucleus C5contraLSpC52
Area X C5contraSCL10C51.5
Deep dorsal horn C5contraDDHC52
Spinal cord layer 5 C5contraSCL5C53
Spinal cord layer 6 C5contraSCL6C52
Deep dorsal horn lateral reticulated area C5contraDDHLRAC52
Spinal cord layer 3 C5contraSCL3C50.5
Superficial dorsal horn C5contraSDHC51
Spinal cord layer 1 C5contraSCL1C53
Spinal cord layer 2 C5contraSCL2C54
Intermediate zone C5contraizVHC50.5
Cervical segment 6contraCS63
Intermediomedial cell column C6contraIMMC61
Lateral spinal nucleus C6contraLSpC62
Area X C6contraSCL10C61.5
Spinal cord layer 5 C6contraSCL5C63
Spinal cord layer 4 C6contraSCL4C61
Spinal cord layer 1 C6contraSCL1C63
Spinal cord layer 2 C6contraSCL2C64
Cervical segment 7contraCS73
Intermediomedial cell column C7contraIMMC71
Lateral spinal nucleus C7contraLSpC72
Area X C7contraSCL10C71.5
Deep dorsal horn C7contraDDHC73
Spinal cord layer 5 C7contraSCL5C73
Spinal cord layer 6 C7contraSCL6C73
Deep dorsal horn lateral reticulated area C7contraDDHLRAC72
Spinal cord layer 3 C7contraSCL3C71
Spinal cord layer 4 C7contraSCL4C71
Superficial dorsal horn C7contraSDHC72
Spinal cord layer 1 C7contraSCL1C73
Spinal cord layer 2 C7contraSCL2C74
Intermediate zone C7contraizVHC70.5
Cervical segment 8contraCS83
Intermediomedial cell column C8contraIMMC81
Lateral spinal nucleus C8contraLSpC82
Area X C8contraSCL10C81.5
Deep dorsal horn C8contraDDHC83
Spinal cord layer 5 C8contraSCL5C83
Spinal cord layer 6 C8contraSCL6C83
Deep dorsal horn lateral reticulated area C8contraDDHLRAC82
Spinal cord layer 3 C8contraSCL3C81
Spinal cord layer 4 C8contraSCL4C81
Superficial dorsal horn C8contraSDHC82
Spinal cord layer 1 C8contraSCL1C83
Spinal cord layer 2 C8contraSCL2C84
Intermediate zone C8contraizVHC80.5
Thoracal segment 1contraT13
Intermediomedial cell column T1contraIMMT11
Lateral spinal nucleus T1contraLSpT12
Area X T1contraSCL10T11.5
Spinal cord layer 5 T1contraSCL5T13
Spinal cord layer 4 T1contraSCL4T11
Spinal cord layer 1 T1contraSCL1T13
Spinal cord layer 2 T1contraSCL2T14
Thoracal segment 2contraT23
Intermediomedial cell column T2contraIMMT21
Lateral spinal nucleus T2contraLSpT22
Area X T2contraSCL10T21.5
Spinal cord layer 5 T2contraSCL5T23
Spinal cord layer 1 T2contraSCL1T23
Spinal cord layer 2 T2contraSCL2T24
Thoracal segment 3contraT33
Intermediomedial cell column T3contraIMMT31
Lateral spinal nucleus T3contraLSpT32
Area X T3contraSCL10T31.5
Spinal cord layer 5 T3contraSCL5T33
Spinal cord layer 1 T3contraSCL1T33
Spinal cord layer 2 T3contraSCL2T34
Thoracal segment 4contraT43
Intermediomedial cell column T4contraIMMT41
Lateral spinal nucleus T4contraLSpT42
Area X T4contraSCL10T42
Deep dorsal horn T4contraDDHT43
Spinal cord layer 5 T4contraSCL5T43
Spinal cord layer 6 T4contraSCL6T43
Deep dorsal horn lateral reticulated area T4contraDDHLRAT43
Spinal cord layer 3 T4contraSCL3T41
Superficial dorsal horn T4contraSDHT42
Spinal cord layer 1 T4contraSCL1T43
Spinal cord layer 2 T4contraSCL2T44
Intermediate zone T4contraizVHT40.5
Thoracal segment 5contraT53
Intermediomedial cell column T5contraIMMT51
Lateral spinal nucleus T5contraLSpT52
Area X T5contraSCL10T51.5
Spinal cord layer 5 T5contraSCL5T53
Spinal cord layer 1 T5contraSCL1T53
Spinal cord layer 2 T5contraSCL2T54
Thoracal segment 6contraT63
Intermediomedial cell column T6contraIMMT61
Lateral spinal nucleus T6contraLSpT62
Area X T6contraSCL10T62
Deep dorsal horn T6contraDDHT63
Spinal cord layer 5 T6contraSCL5T63
Spinal cord layer 6 T6contraSCL6T63
Deep dorsal horn lateral reticulated area T6contraDDHLRAT63
Spinal cord layer 3 T6contraSCL3T61
Superficial dorsal horn T6contraSDHT62
Spinal cord layer 1 T6contraSCL1T63
Spinal cord layer 2 T6contraSCL2T64
Intermediate zone T6contraizVHT60.5
Thoracal segment 7contraT73
Intermediomedial cell column T7contraIMMT71
Lateral spinal nucleus T7contraLSpT72
Area X T7contraSCL10T71.5
Spinal cord layer 5 T7contraSCL5T73
Spinal cord layer 1 T7contraSCL1T73
Spinal cord layer 2 T7contraSCL2T74
Thoracal segment 8contraT83
Intermediomedial cell column T8contraIMMT81
Lateral spinal nucleus T8contraLSpT82
Area X T8contraSCL10T82
Deep dorsal horn T8contraDDHT83
Spinal cord layer 5 T8contraSCL5T83
Spinal cord layer 6 T8contraSCL6T83
Deep dorsal horn lateral reticulated area T8contraDDHLRAT83
Spinal cord layer 3 T8contraSCL3T81
Superficial dorsal horn T8contraSDHT82
Spinal cord layer 1 T8contraSCL1T83
Spinal cord layer 2 T8contraSCL2T84
Intermediate zone T8contraizVHT80.5
Thoracal segment 9contraT93
Intermediomedial cell column T9contraIMMT91
Lateral spinal nucleus T9contraLSpT92
Area X T9contraSCL10T91.5
Spinal cord layer 5 T9contraSCL5T93
Spinal cord layer 1 T9contraSCL1T93
Spinal cord layer 2 T9contraSCL2T94
Thoracal segment 10contraT103
Intermediomedial cell column T10contraIMMT101
Lateral spinal nucleus T10contraLSpT102
Area X T10contraSCL10T101.5
Spinal cord layer 5 T10contraSCL5T103
Spinal cord layer 1 T10contraSCL1T103
Spinal cord layer 2 T10contraSCL2T104
Thoracal segment 11contraT113
Intermediomedial cell column T11contraIMMT111
Lateral spinal nucleus T11contraLSpT112
Area X T11contraSCL10T111.5
Spinal cord layer 5 T11contraSCL5T113
Spinal cord layer 1 T11contraSCL1T113
Spinal cord layer 2 T11contraSCL2T114
Thoracal segment 12contraT123
Intermediomedial cell column T12contraIMMT121
Lateral spinal nucleus T12contraLSpT122
Area X T12contraSCL10T122
Deep dorsal horn T12contraDDHT123
Spinal cord layer 5 T12contraSCL5T123
Spinal cord layer 6 T12contraSCL6T123
Deep dorsal horn lateral reticulated area T12contraDDHLRAT123
Spinal cord layer 3 T12contraSCL3T121
Superficial dorsal horn T12contraSDHT122
Spinal cord layer 1 T12contraSCL1T123
Spinal cord layer 2 T12contraSCL2T124
Intermediate zone T12contraizVHT120.5
Intermediomedial cell column T13contraIMMT131
Lateral spinal nucleus T13contraLSpT132
Area X T13contraSCL10T131.5
Spinal cord layer 5 T13contraSCL5T133
Spinal cord layer 1 T13contraSCL1T133
Spinal cord layer 2 T13contraSCL2T134
Lumbar segment 1contraL13
Intermediomedial cell column L1contraIMML11
Lateral spinal nucleus L1contraLSpL12
Area X L1contraSCL10L12
Deep dorsal horn L1contraDDHL12
Spinal cord layer 5 L1contraSCL5L13
Spinal cord layer 6 L1contraSCL6L12
Deep dorsal horn lateral reticulated area L1contraDDHLRAL12
Spinal cord layer 3 L1contraSCL3L11
Superficial dorsal horn L1contraSDHL12
Spinal cord layer 1 L1contraSCL1L13
Spinal cord layer 2 L1contraSCL2L14
Intermediate zone L1contraizVHL10.5
Lumbar segment 2contraL23
Intermediomedial cell column L2contraIMML21
Lateral spinal nucleus L2contraLSpL22
Area X L2contraSCL10L22
Deep dorsal horn L2contraDDHL22
Spinal cord layer 5 L2contraSCL5L23
Spinal cord layer 6 L2contraSCL6L22
Deep dorsal horn lateral reticulated area L2contraDDHLRAL22
Spinal cord layer 3 L2contraSCL3L21
Superficial dorsal horn L2contraSDHL22
Spinal cord layer 1 L2contraSCL1L23
Spinal cord layer 2 L2contraSCL2L24
Intermediate zone L2contraizVHL20.5
Lumbar segment 3contraL33
Intermediomedial cell column L3contraIMML31
Lateral spinal nucleus L3contraLSpL32
Area X L3contraSCL10L32
Deep dorsal horn L3contraDDHL32
Spinal cord layer 5 L3contraSCL5L33
Spinal cord layer 6 L3contraSCL6L32
Deep dorsal horn lateral reticulated area L3contraDDHLRAL32
Spinal cord layer 3 L3contraSCL3L31
Superficial dorsal horn L3contraSDHL32
Spinal cord layer 1 L3contraSCL1L33
Spinal cord layer 2 L3contraSCL2L34
Intermediate zone L3contraizVHL30.5
Lumbar segment 4contraL43
Intermediomedial cell column L4contraIMML41
Lateral spinal nucleus L4contraLSpL42
Area X L4contraSCL10L42
Deep dorsal horn L4contraDDHL42
Spinal cord layer 5 L4contraSCL5L43
Spinal cord layer 6 L4contraSCL6L41
Deep dorsal horn lateral reticulated area L4contraDDHLRAL42
Spinal cord layer 3 L4contraSCL3L41
Superficial dorsal horn L4contraSDHL41
Spinal cord layer 1 L4contraSCL1L43
Spinal cord layer 2 L4contraSCL2L44
Intermediate zone L4contraizVHL40.5
Lumbar segment 5contraL53
Intermediomedial cell column L5contraIMML51
Lateral spinal nucleus L5contraLSpL52
Area X L5contraSCL10L52
Deep dorsal horn L5contraDDHL52
Spinal cord layer 5 L5contraSCL5L53
Spinal cord layer 6 L5contraSCL6L51
Deep dorsal horn lateral reticulated area L5contraDDHLRAL52
Spinal cord layer 3 L5contraSCL3L51
Superficial dorsal horn L5contraSDHL51
Spinal cord layer 1 L5contraSCL1L53
Spinal cord layer 2 L5contraSCL2L54
Intermediate zone L5contraizVHL50.5
Lumbar segment 6contraL63
Intermediomedial cell column L6contraIMML61
Lateral spinal nucleus L6contraLSpL62
Lumbar parasympathetic nucleus L6contraLPSyL61
Area X L6contraSCL10L61.5
Deep dorsal horn L6contraDDHL62
Spinal cord layer 5 L6contraSCL5L63
Spinal cord layer 6 L6contraSCL6L62
Deep dorsal horn lateral reticulated area L6contraDDHLRAL62
Spinal cord layer 3 L6contraSCL3L61
Superficial dorsal horn L6contraSDHL62
Spinal cord layer 1 L6contraSCL1L63
Spinal cord layer 2 L6contraSCL2L64
Intermediate zone L6contraizVHL62
Sacral segment 1contraSa13
Intermediomedial cell column S1contraIMMS11
Lateral spinal nucleus S1contraLSpS12
Sacral parasympathetic nucleus S1contraSPSyS12
Area X S1contraSCL10S11.5
Deep dorsal horn S1contraDDHS12
Spinal cord layer 5 S1contraSCL5S13
Spinal cord layer 6 S1contraSCL6S12
Deep dorsal horn lateral reticulated area S1contraDDHLRAS12
Spinal cord layer 3 S1contraSCL3S11
Superficial dorsal horn S1contraSDHS12
Spinal cord layer 1 S1contraSCL1S13
Spinal cord layer 2 S1contraSCL2S14
Intermediate zone S1contraizVHS12
Sacral segment 2contraSa23
Intermediomedial cell column S2contraIMMS21
Lateral spinal nucleus S2contraLSpS22
Sacral parasympathetic nucleus S2contraSPSyS22
Area X S2contraSCL10S21.5
Deep dorsal horn S2contraDDHS22
Spinal cord layer 5 S2contraSCL5S23
Spinal cord layer 6 S2contraSCL6S22
Deep dorsal horn lateral reticulated area S2contraDDHLRAS22
Spinal cord layer 3 S2contraSCL3S21
Superficial dorsal horn S2contraSDHS22
Spinal cord layer 1 S2contraSCL1S23
Spinal cord layer 2 S2contraSCL2S24
Intermediate zone S2contraizVHS22
Sacral parasympathetic nucleus S3contraSPSyS32
Sacral parasympathetic nucleus S4contraSPSyS42
Ventral horn of spinal cordcontraVHMES3
Central gray pons partipsiCGP1
Central gray pons part pars alphaipsiSGCa1
Paralemniscal nucleusipsiPL2
Periaqueductal grayipsiPAG3
Dorsolateral periaqueductal grayipsiDLPAG1
Dorsomedial periaqueductal grayipsiDMPAG0.5
Lateral periaqueductal grayipsiLPAG0.5
Ventral periaqueductal grayipsiVPAG1
Ventrolateral periaqueductal grayipsiVLPAG1
External cortex of the inferior colliculusipsiECIC0.5
Intermediate gray layer of the superior colliculusipsiInG0.5
Deep gray layer of the superior colliculusipsiDpG1
Mesopontine tegmental areaipsiTGAm0.5
Peduncularpontine nucleusipsiPPN0.5
Substantia nigra A9ipsiSN3
Ventral tegmental area A10ipsiVTA0.5
Ventral tegmental area A10 lateral nucleiipsiVTALN1
Ventral tegmental area A10 medial nucleiipsiVTAmn1
Interfascicular nucleusipsiIF-0.5
Ventral tegmental area posterior partipsiVTAP2
Caudal linear nucleus of the rapheipsiCLi-0.5
Peripeduncular areaipsiPPA1
Laterodorsal tegmental nucleusipsiLDTg1
Ventral tegmental nucleusipsiVTg3
Ventral tegmental nucleus peripheral partipsiVTgp-0.5
Ventral tegmental nucleus ventral partipsiVTgv-0.5
Dorsal tegmental nucleusipsiDTg3
Dorsal tegmental nucleus ventral partipsiDTgV-0.5
Pedunculopontine tegmental nucleusipsiPPTg2
Locus coeruleusipsiLC3
Nucleus incertusipsiNI0.5
Pontomesencephalic grayipsiPoMG3
Mesencephalic reticular formationipsiMRF3
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleusipsiPRN1
Cuneiforme nucleusipsiCnF2
Koelliker Fuse nucleusipsiKF4
Lateral parabrachial nucleusipsiLPB3
Parabrachial nucleus dorsal partipsiPBD3
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi0.5
Medullary reticular nucleus ventral partipsiMdV0.5
Spinal trigeminal nucleus caudal partipsiSp5C0.5
Trigeminal subnucleus caudalisipsi5SSC0.5
Nucleus of the solitary tractipsiSol1
Dorsal raphe nucleusipsiDR1
Dorsal raphe nucleus central partipsiDRcep0.5
Dorsal raphe nucleus rostral partipsiDRr1
Median raphe nucleusipsiMnR0
Superior central raphe nucleus compact subnucleusipsiSCc-0.5
Raphe magnus nucleusipsiRMg1
Lateral paragigantocellular nucleusipsiLPGi0.5
Dorsal endopiriform nucleusipsiDEn1
Diagonal band of BrocaipsiDBB0.5
Nucleus of the vertical limb of the diagonal band dorsal partipsiVDBDo-2
Medial septal nucleusipsiMS3
Substantia innominataipsiSI3
Substantia innominata medial partipsiSIme1
Substantia innominata ventral partipsiSIV3
Lateral preoptic areaipsiLPO1
Lateral preoptic area medial partipsiLPOm-0.5
Lateral preoptic lateral hypothalamic continuumipsiLPOLH3
Medial preoptic areaipsiMPA4
Medial preoptic nucleusipsiMPO4
Medial preoptic nucleus central partipsiMPOC0.5
Medial preoptic nucleus lateral partipsiMPOL2
Medial preoptic nucleus medial partipsiMPOM0.5
Median preoptic nucleusipsiMnPO2
Dorsal tenia tectaipsiDTT1
Ventral tenia tectaipsiVTT0.5
Dorsal tuberomammillary nucleusipsiDTM2
HypothalamusipsiHYPO3
Lateral hypothalamic areaipsiLH4
Striohypothalamic nucleusipsiStHy3
Tuberal division of the lateral hypothalamic areaipsiLHTC-2
Anterior hypothalamic areaipsiAHA0.5
Anterior hypothalamic area anterior partipsiAHAA2
Anterior hypothalamic area central partipsiAHAC4
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe3
Anterior hypothalamic nucleusipsiAHn2
Anteroventral preoptic nucleusipsiAnV2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus ventral partipsiDMV0.5
Posterior hypothalamic nucleusipsiPH3
Subparaventricular zoneipsiSuPZ0.5
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL0.5
Arcuate nucleusipsiArc3
Ventral part of the paraventricular hypothalamic nucleus medial parvicellular subdivisionipsiVPaMP0.5
Paraventricular hypothalamic nucleusipsiPa1
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag1
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo2
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA0.5
Periventricular hypothalamic nucleusipsiPe3
Posterior periventricular nucleusipsiPeP0.5
Suprachiasmatic nucleusipsiSCh2
Supraoptic nucleus [Supraoptic region]ipsiSO2
Premammillary nucleus dorsal partipsiPMD1
Premammillary nucleus ventral partipsiPMV2
Supramammillar nucleusipsiSuM0.5
Supramammillar nucleus lateral partipsiSuML0.5
Supramammillar nucleus medial partipsiSuMM0.5
Perifornical nucleusipsiPeF3
Retrochiasmatic areaipsiRCh1
Ventral part of the lateral geniculate complex lateral zoneipsiLGvlz0.5
Paratenial thalamic nucleusipsiPT0.5
Subfornical organipsiSFO0.5
Posterior intralaminar thalamic nucleusipsiPIL1
Subparafascicular thalamic nucleusipsiSPF2
Zona incertaipsiZI0.5
Lateral habenular nucleusipsiLHb0.5
Medial habenular nucleusipsiMHb1
Amygdaloid complexipsiAC-0.5
Basolateral amygdaloid nucleusipsiBL0
Anterior basolateral nucleusipsiBLA1
Posterior basolateral nucleusipsiBLP1
Anterior basomedial nucleusipsiBMA2
Basomedial nucleus medial partipsiBMme4
Posterior basomedial nucleusipsiBMP1
Lateral amygdaloid nucleusipsiLA0
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD1
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc0.5
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA1
Bed nucleus of the stria terminalis lateral divisionipsiBSTL0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM4
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif1
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr1
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv1
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus medial division dorsal partipsiCeMD0.5
Amygdalopiriform transition areaipsiAPir1
Anterior cortical amygdaloid nucleusipsiACo2
Posterolateral cortical nucleusipsiPLCo0.5
Medial amygdaloid nucleusipsiMe-0.5
Medial amygdaloid nucleus anterodorsal partipsiMeAD0.5
Medial amygdaloid nucleus posterodorsal partipsiMePD0.5
Amygdalohippocampal areaipsiAHi4
Bed nucleus of the accessory olfactory tractipsiBAOT2
Posteromedial cortical nucleusipsiPMCo1
Lateral globus pallidusipsiLGP0.5
Medial globus pallidusipsiMGP2.5
Ventral pallidum rostral partipsiVPr1
Accumbens nucleusipsiAc3
Periaccumbens areaipsiPeAc2
Posteromedial accumbensipsiAcbPM3
Caudate putamenipsiCPu0
SubiculumipsiS4
Subiculum ventral partipsiSv-0.5
Piriform cortexipsiPir0.5
Cingulate cortexipsiCg0.5
Prelimbic cortexipsiPrL2
Infralimbic areaipsiiLA0.5
Infralimbic cortexipsiIL3
Agranular insular cortexipsiAI0.5
Perirhinal cortexipsiA350.5
Ectorhinal cortexipsiA360.5
Dorsal peduncular cortexipsiDP2
Medial orbital cortexipsiMO2
Nucleus of the posterior commissureipsiPCom0.5
Precommissural nucleusipsiPrC1
Around anterior commissureipsiAac0
Interpeduncular nucleusipsiIP0.5
Olfactory bulb A16ipsiMOB0.5
Olfactory-limbic-transitional zoneipsiOFLT2
Olfactory tubercle polymorph layeripsiTuOpo0.5
Olfactory tubercle medial partipsiTuOMP3
Olfactory tubercle ventral partipsiTuOV1
Semilunar nucleusipsiSL1
Dorsal septumipsiDSER0.5
Lateral septal nucleusipsiLS4
Septofimbrial nucleusipsiSFi1
Septal region intermediate partipsiSERi4
Ventral septal regionipsiVSER4
Ventral telencephalonipsiVTEL3
Spinal cordipsiMES2
Intermediate zone of spinal cordipsiIzMES2
Lateral spinal nucleusipsiMESLn2
Spinal cord lamina 3 lateral partipsiMESL3L2
Spinal cord lamina 4 lateral partipsiMESL4L2
Spinal cord lamina 10ipsiMESL102
Spinal cord lamina 1ipsiMESL12
Cervical segment 1ipsiCS12
Intermediomedial cell column C1ipsiIMMC11
Lateral spinal nucleus C1ipsiLSpC13
Area X C1ipsiSCL10C12
Deep dorsal horn C1ipsiDDHC13
Spinal cord layer 5 C1ipsiSCL5C13
Spinal cord layer 6 C1ipsiSCL6C13
Deep dorsal horn lateral reticulated area C1ipsiDDHLRAC13
Spinal cord layer 3 C1ipsiSCL3C10.5
Superficial dorsal horn C1ipsiSDHC11
Spinal cord layer 1 C1ipsiSCL1C12
Spinal cord layer 2 C1ipsiSCL2C13
Intermediate zone C1ipsiizVHC12
Cervical segment 2ipsiCS22
Intermediomedial cell column C2ipsiIMMC21
Lateral spinal nucleus C2ipsiLSpC23
Area X C2ipsiSCL10C22
Deep dorsal horn C2ipsiDDHC23
Spinal cord layer 5 C2ipsiSCL5C23
Spinal cord layer 6 C2ipsiSCL6C23
Deep dorsal horn lateral reticulated area C2ipsiDDHLRAC23
Spinal cord layer 3 C2ipsiSCL3C20.5
Superficial dorsal horn C2ipsiSDHC21
Spinal cord layer 1 C2ipsiSCL1C22
Spinal cord layer 2 C2ipsiSCL2C23
Intermediate zone C2ipsiizVHC22
Cervical segment 3ipsiCS32
Intermediomedial cell column C3ipsiIMMC31
Lateral spinal nucleus C3ipsiLSpC33
Area X C3ipsiSCL10C31
Spinal cord layer 5 C3ipsiSCL5C32
Spinal cord layer 1 C3ipsiSCL1C32
Spinal cord layer 2 C3ipsiSCL2C33
Cervical segment 4ipsiCS42
Intermediomedial cell column C4ipsiIMMC41
Lateral spinal nucleus C4ipsiLSpC43
Area X C4ipsiSCL10C41
Deep dorsal horn C4ipsiDDHC42
Spinal cord layer 5 C4ipsiSCL5C42
Spinal cord layer 6 C4ipsiSCL6C42
Deep dorsal horn lateral reticulated area C4ipsiDDHLRAC42
Spinal cord layer 3 C4ipsiSCL3C40.5
Superficial dorsal horn C4ipsiSDHC40.5
Spinal cord layer 1 C4ipsiSCL1C42
Spinal cord layer 2 C4ipsiSCL2C43
Intermediate zone C4ipsiizVHC40.5
Cervical segment 5ipsiCS52
Intermediomedial cell column C5ipsiIMMC51
Lateral spinal nucleus C5ipsiLSpC53
Area X C5ipsiSCL10C51
Deep dorsal horn C5ipsiDDHC52
Spinal cord layer 5 C5ipsiSCL5C52
Spinal cord layer 6 C5ipsiSCL6C52
Deep dorsal horn lateral reticulated area C5ipsiDDHLRAC52
Spinal cord layer 3 C5ipsiSCL3C50.5
Superficial dorsal horn C5ipsiSDHC50.5
Spinal cord layer 1 C5ipsiSCL1C52
Spinal cord layer 2 C5ipsiSCL2C53
Intermediate zone C5ipsiizVHC50.5
Cervical segment 6ipsiCS62
Intermediomedial cell column C6ipsiIMMC61
Lateral spinal nucleus C6ipsiLSpC63
Area X C6ipsiSCL10C61
Spinal cord layer 5 C6ipsiSCL5C62
Spinal cord layer 4 C6ipsiSCL4C61
Spinal cord layer 1 C6ipsiSCL1C62
Spinal cord layer 2 C6ipsiSCL2C63
Cervical segment 7ipsiCS72
Intermediomedial cell column C7ipsiIMMC71
Lateral spinal nucleus C7ipsiLSpC73
Area X C7ipsiSCL10C72
Deep dorsal horn C7ipsiDDHC72
Spinal cord layer 5 C7ipsiSCL5C73
Spinal cord layer 6 C7ipsiSCL6C73
Deep dorsal horn lateral reticulated area C7ipsiDDHLRAC72
Spinal cord layer 3 C7ipsiSCL3C70.5
Spinal cord layer 4 C7ipsiSCL4C71
Superficial dorsal horn C7ipsiSDHC72
Spinal cord layer 1 C7ipsiSCL1C72
Spinal cord layer 2 C7ipsiSCL2C73
Intermediate zone C7ipsiizVHC70.5
Spinal cord layer 7 C7ipsiSCL7C70
Cervical segment 8ipsiCS82
Intermediomedial cell column C8ipsiIMMC81
Lateral spinal nucleus C8ipsiLSpC83
Area X C8ipsiSCL10C82
Deep dorsal horn C8ipsiDDHC82
Spinal cord layer 5 C8ipsiSCL5C83
Spinal cord layer 6 C8ipsiSCL6C83
Deep dorsal horn lateral reticulated area C8ipsiDDHLRAC82
Spinal cord layer 3 C8ipsiSCL3C81
Spinal cord layer 4 C8ipsiSCL4C81
Superficial dorsal horn C8ipsiSDHC82
Spinal cord layer 1 C8ipsiSCL1C82
Spinal cord layer 2 C8ipsiSCL2C83
Intermediate zone C8ipsiizVHC80.5
Thoracal segment 1ipsiT12
Intermediomedial cell column T1ipsiIMMT11
Lateral spinal nucleus T1ipsiLSpT13
Area X T1ipsiSCL10T11
Spinal cord layer 5 T1ipsiSCL5T12
Spinal cord layer 4 T1ipsiSCL4T11
Spinal cord layer 1 T1ipsiSCL1T12
Spinal cord layer 2 T1ipsiSCL2T13
Thoracal segment 2ipsiT22
Intermediomedial cell column T2ipsiIMMT21
Lateral spinal nucleus T2ipsiLSpT23
Area X T2ipsiSCL10T21
Spinal cord layer 5 T2ipsiSCL5T22
Spinal cord layer 1 T2ipsiSCL1T22
Spinal cord layer 2 T2ipsiSCL2T23
Thoracal segment 3ipsiT32
Intermediomedial cell column T3ipsiIMMT31
Lateral spinal nucleus T3ipsiLSpT33
Area X T3ipsiSCL10T31
Spinal cord layer 5 T3ipsiSCL5T32
Spinal cord layer 1 T3ipsiSCL1T32
Spinal cord layer 2 T3ipsiSCL2T33
Thoracal segment 4ipsiT42
Intermediomedial cell column T4ipsiIMMT41
Lateral spinal nucleus T4ipsiLSpT43
Area X T4ipsiSCL10T42
Deep dorsal horn T4ipsiDDHT43
Spinal cord layer 5 T4ipsiSCL5T43
Spinal cord layer 6 T4ipsiSCL6T43
Deep dorsal horn lateral reticulated area T4ipsiDDHLRAT43
Spinal cord layer 3 T4ipsiSCL3T41
Superficial dorsal horn T4ipsiSDHT41
Spinal cord layer 1 T4ipsiSCL1T42
Spinal cord layer 2 T4ipsiSCL2T43
Intermediate zone T4ipsiizVHT40.5
Thoracal segment 5ipsiT52
Intermediomedial cell column T5ipsiIMMT51
Lateral spinal nucleus T5ipsiLSpT53
Area X T5ipsiSCL10T51
Spinal cord layer 5 T5ipsiSCL5T52
Spinal cord layer 1 T5ipsiSCL1T52
Spinal cord layer 2 T5ipsiSCL2T53
Thoracal segment 6ipsiT62
Intermediomedial cell column T6ipsiIMMT61
Lateral spinal nucleus T6ipsiLSpT63
Area X T6ipsiSCL10T62
Deep dorsal horn T6ipsiDDHT63
Spinal cord layer 5 T6ipsiSCL5T63
Spinal cord layer 6 T6ipsiSCL6T63
Deep dorsal horn lateral reticulated area T6ipsiDDHLRAT63
Spinal cord layer 3 T6ipsiSCL3T61
Superficial dorsal horn T6ipsiSDHT61
Spinal cord layer 1 T6ipsiSCL1T62
Spinal cord layer 2 T6ipsiSCL2T63
Intermediate zone T6ipsiizVHT60.5
Thoracal segment 7ipsiT72
Intermediomedial cell column T7ipsiIMMT71
Lateral spinal nucleus T7ipsiLSpT73
Area X T7ipsiSCL10T71
Spinal cord layer 5 T7ipsiSCL5T72
Spinal cord layer 1 T7ipsiSCL1T72
Spinal cord layer 2 T7ipsiSCL2T73
Thoracal segment 8ipsiT82
Intermediomedial cell column T8ipsiIMMT81
Lateral spinal nucleus T8ipsiLSpT83
Area X T8ipsiSCL10T82
Deep dorsal horn T8ipsiDDHT83
Spinal cord layer 5 T8ipsiSCL5T83
Spinal cord layer 6 T8ipsiSCL6T83
Deep dorsal horn lateral reticulated area T8ipsiDDHLRAT83
Spinal cord layer 3 T8ipsiSCL3T81
Superficial dorsal horn T8ipsiSDHT81
Spinal cord layer 1 T8ipsiSCL1T82
Spinal cord layer 2 T8ipsiSCL2T83
Intermediate zone T8ipsiizVHT80.5
Thoracal segment 9ipsiT92
Intermediomedial cell column T9ipsiIMMT91
Lateral spinal nucleus T9ipsiLSpT93
Area X T9ipsiSCL10T91
Spinal cord layer 5 T9ipsiSCL5T92
Spinal cord layer 1 T9ipsiSCL1T92
Spinal cord layer 2 T9ipsiSCL2T93
Thoracal segment 10ipsiT102
Intermediomedial cell column T10ipsiIMMT101
Lateral spinal nucleus T10ipsiLSpT103
Area X T10ipsiSCL10T101
Spinal cord layer 5 T10ipsiSCL5T102
Spinal cord layer 1 T10ipsiSCL1T102
Spinal cord layer 2 T10ipsiSCL2T103
Thoracal segment 11ipsiT112
Intermediomedial cell column T11ipsiIMMT111
Lateral spinal nucleus T11ipsiLSpT113
Area X T11ipsiSCL10T111
Spinal cord layer 5 T11ipsiSCL5T112
Spinal cord layer 1 T11ipsiSCL1T112
Spinal cord layer 2 T11ipsiSCL2T113
Thoracal segment 12ipsiT122
Intermediomedial cell column T12ipsiIMMT121
Lateral spinal nucleus T12ipsiLSpT123
Area X T12ipsiSCL10T122
Deep dorsal horn T12ipsiDDHT123
Spinal cord layer 5 T12ipsiSCL5T123
Spinal cord layer 6 T12ipsiSCL6T123
Deep dorsal horn lateral reticulated area T12ipsiDDHLRAT123
Spinal cord layer 3 T12ipsiSCL3T121
Superficial dorsal horn T12ipsiSDHT121
Spinal cord layer 1 T12ipsiSCL1T122
Spinal cord layer 2 T12ipsiSCL2T123
Intermediate zone T12ipsiizVHT120.5
Intermediomedial cell column T13ipsiIMMT131
Lateral spinal nucleus T13ipsiLSpT133
Area X T13ipsiSCL10T131
Spinal cord layer 5 T13ipsiSCL5T132
Spinal cord layer 1 T13ipsiSCL1T132
Spinal cord layer 2 T13ipsiSCL2T133
Lumbar segment 1ipsiL12
Intermediomedial cell column L1ipsiIMML11
Lateral spinal nucleus L1ipsiLSpL13
Area X L1ipsiSCL10L12
Deep dorsal horn L1ipsiDDHL12
Spinal cord layer 5 L1ipsiSCL5L12
Spinal cord layer 6 L1ipsiSCL6L12
Deep dorsal horn lateral reticulated area L1ipsiDDHLRAL12
Spinal cord layer 3 L1ipsiSCL3L11
Superficial dorsal horn L1ipsiSDHL11
Spinal cord layer 1 L1ipsiSCL1L12
Spinal cord layer 2 L1ipsiSCL2L13
Intermediate zone L1ipsiizVHL10.5
Lumbar segment 2ipsiL22
Intermediomedial cell column L2ipsiIMML21
Lateral spinal nucleus L2ipsiLSpL23
Area X L2ipsiSCL10L22
Deep dorsal horn L2ipsiDDHL22
Spinal cord layer 5 L2ipsiSCL5L22
Spinal cord layer 6 L2ipsiSCL6L22
Deep dorsal horn lateral reticulated area L2ipsiDDHLRAL22
Spinal cord layer 3 L2ipsiSCL3L21
Superficial dorsal horn L2ipsiSDHL21
Spinal cord layer 1 L2ipsiSCL1L22
Spinal cord layer 2 L2ipsiSCL2L23
Intermediate zone L2ipsiizVHL20.5
Lumbar segment 3ipsiL32
Intermediomedial cell column L3ipsiIMML31
Lateral spinal nucleus L3ipsiLSpL33
Area X L3ipsiSCL10L32
Deep dorsal horn L3ipsiDDHL32
Spinal cord layer 5 L3ipsiSCL5L32
Spinal cord layer 6 L3ipsiSCL6L32
Deep dorsal horn lateral reticulated area L3ipsiDDHLRAL32
Spinal cord layer 3 L3ipsiSCL3L31
Superficial dorsal horn L3ipsiSDHL31
Spinal cord layer 1 L3ipsiSCL1L32
Spinal cord layer 2 L3ipsiSCL2L33
Intermediate zone L3ipsiizVHL30.5
Lumbar segment 4ipsiL42
Intermediomedial cell column L4ipsiIMML41
Lateral spinal nucleus L4ipsiLSpL43
Area X L4ipsiSCL10L41
Deep dorsal horn L4ipsiDDHL42
Spinal cord layer 5 L4ipsiSCL5L42
Spinal cord layer 6 L4ipsiSCL6L41
Deep dorsal horn lateral reticulated area L4ipsiDDHLRAL42
Spinal cord layer 3 L4ipsiSCL3L41
Superficial dorsal horn L4ipsiSDHL41
Spinal cord layer 1 L4ipsiSCL1L42
Spinal cord layer 2 L4ipsiSCL2L43
Intermediate zone L4ipsiizVHL40.5
Lumbar segment 5ipsiL52
Intermediomedial cell column L5ipsiIMML51
Lateral spinal nucleus L5ipsiLSpL53
Area X L5ipsiSCL10L51
Deep dorsal horn L5ipsiDDHL52
Spinal cord layer 5 L5ipsiSCL5L52
Spinal cord layer 6 L5ipsiSCL6L51
Deep dorsal horn lateral reticulated area L5ipsiDDHLRAL52
Spinal cord layer 3 L5ipsiSCL3L51
Superficial dorsal horn L5ipsiSDHL51
Spinal cord layer 1 L5ipsiSCL1L52
Spinal cord layer 2 L5ipsiSCL2L53
Intermediate zone L5ipsiizVHL50.5
Lumbar segment 6ipsiL62
Intermediomedial cell column L6ipsiIMML61
Lateral spinal nucleus L6ipsiLSpL63
Lumbar parasympathetic nucleus L6ipsiLPSyL61
Area X L6ipsiSCL10L61
Deep dorsal horn L6ipsiDDHL62
Spinal cord layer 5 L6ipsiSCL5L62
Spinal cord layer 6 L6ipsiSCL6L62
Deep dorsal horn lateral reticulated area L6ipsiDDHLRAL62
Spinal cord layer 3 L6ipsiSCL3L61
Superficial dorsal horn L6ipsiSDHL62
Spinal cord layer 1 L6ipsiSCL1L62
Spinal cord layer 2 L6ipsiSCL2L63
Intermediate zone L6ipsiizVHL62
Sacral segment 1ipsiSa12
Intermediomedial cell column S1ipsiIMMS11
Lateral spinal nucleus S1ipsiLSpS13
Sacral parasympathetic nucleus S1ipsiSPSyS12
Area X S1ipsiSCL10S11
Deep dorsal horn S1ipsiDDHS12
Spinal cord layer 5 S1ipsiSCL5S12
Spinal cord layer 6 S1ipsiSCL6S12
Deep dorsal horn lateral reticulated area S1ipsiDDHLRAS12
Spinal cord layer 3 S1ipsiSCL3S11
Superficial dorsal horn S1ipsiSDHS12
Spinal cord layer 1 S1ipsiSCL1S12
Spinal cord layer 2 S1ipsiSCL2S13
Intermediate zone S1ipsiizVHS12
Sacral segment 2ipsiSa22
Intermediomedial cell column S2ipsiIMMS21
Lateral spinal nucleus S2ipsiLSpS23
Sacral parasympathetic nucleus S2ipsiSPSyS22
Area X S2ipsiSCL10S21
Deep dorsal horn S2ipsiDDHS22
Spinal cord layer 5 S2ipsiSCL5S22
Spinal cord layer 6 S2ipsiSCL6S22
Deep dorsal horn lateral reticulated area S2ipsiDDHLRAS22
Spinal cord layer 3 S2ipsiSCL3S21
Superficial dorsal horn S2ipsiSDHS22
Spinal cord layer 1 S2ipsiSCL1S22
Spinal cord layer 2 S2ipsiSCL2S23
Intermediate zone S2ipsiizVHS22
Sacral parasympathetic nucleus S3ipsiSPSyS31
Sacral parasympathetic nucleus S4ipsiSPSyS41
Ventral horn of spinal cordipsiVHMES2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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