University of Rostock

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Rat connectome



Superior cerebellar peduncle left


Abbreviation
sucep
Color       
Superior regionsCerebellar peduncles

SynonymsAbbr.Language
Superior cerebellar pedunclesucepEng
Brachium conjunctivumbconEng
Superior cerebellar peduncle  
Superior cerebellar peduncle brachium conjunctivumscpEng

SubregionsSide
Superior cerebellar peduncle descending limbleft
Medial part of the superior cerebellar peduncleleft
Dorsolateral edge of the superior cerebellar peduncleleft
Area dorsally adjacent to the superior cerebellar peduncleleft
Ventral tip of the superior cerebellar peduncle brachium conjunctivumleft
Anterolateral curve of the superior cerebellar peduncle brachium conjunctivumleft
Lateral half of the superior cerebellar peduncle brachium conjunctivumleft
Ventrolateral superior cerebellar peduncle brachium conjunctivumleft
Decussation of the brachium conjunctivumleft
Mediolateral extent of the brachium conjunctivumleft
Brachium conjunctivum medial partleft
Area ventral to the brachium conjunctivumleft
Dorsal surface of the superior cerebellar peduncle brachium conjunctivumleft
Superior cerebellar peduncle brachium conjunctivumleft
Dorsolateral part of the brachium conjunctivumleft
Superior pedunclar decussationleft
Superior cerebellar peduncle lateral partleft
Dorsal fascicle of the brachiumleft
Ventral fascicle of the brachiumleft
Superior cerebellar peduncle lateral tipleft
Ventrolateral to the lateral tip area of the brachium conjunctivumleft
Rostrally in a region around the lateral tip of the brachium conjunctivumleft

Output to

NameSideAbbr.WeightDetails
Red nucleusipsiR-2
Anterior lobeipsiAnL-2
Parabrachial nucleus caudal partipsiPBca-2
Medullary reticular nucleus ventrolateral part rostral partipsiMdVLR-2
Parvicellular reticular nucleusipsiPCRt-0.5
Dorsal raphe nucleusipsiDR3
Rostral part of the ventromedial medulla oblongataipsiRMeObvm3
Lateral preoptic areaipsiLPO-2
Medial preoptic nucleusipsiMPO-2
HypothalamusipsiHYPO-2
Posterior region [Lateral division of the hypothalamus]ipsiPReg-2
Caudal levels of the suprafornical areaipsiLHAsC0.5
Lateral hypothalamic area suprafornical area at the level of superior lateral subnucleusipsiLHAsLSL1
Lateral hypothalamic area suprafornical region at the level of the internal lateral subnucleusipsiLHAsiLs1
Lateral hypothalamic area perifornical partipsiPFx-2
Peduncular part of lateral hypothalamusipsiPLH-2
Posterior hypothalamic nucleusipsiPH-2
Arcuate nucleusipsiArc2
Reticular thalamic nucleus rostral partipsiRtr-2
Medial forebrain bundleipsimfb-2
Infralimbic cortexipsiIL1
Frontoparietal cortex at the border between lateral agranular prefrontal cortex and primary somatosensory cortexipsiFPCbAGl-2
Frontal polar cortex lateral partipsiFPl-0.5
Agranular insular cortex dorsal partipsiAID-0.5
Agranular insular cortex ventral partipsiAIV-0.5
Granular insular cortexipsiGI-0.5
Red nucleuscontraR-2
Anterior lobecontraAnL-2
Inferior olivecontraIO-2
Inferior olive medial nucleus caudal partcontraIOMc-2
Inferior olive principal nucleuscontraIOPr-2
Rostral part of the ventromedial medulla oblongatacontraRMeObvm3
Posterior region [Lateral division of the hypothalamus]contraPReg0
Posterior hypothalamic nucleuscontraPH-2
Frontoparietal cortex at the border between lateral agranular prefrontal cortex and primary somatosensory cortexcontraFPCbAGl-2

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG0
TectumipsiTEC0
CerebellumipsiCERE-2
Nodulus sublobule aipsiNODa-2
Interposed cerebellar nucleiipsiICN-2
Interposed cerebellar nucleus dorsolateral humpipsiIntDL-2
Lateral cerebellar nucleusipsiCERL-2
Lateral cerebellar nucleus lateral partipsiCERLL-2
Medial cerebellar nucleusipsiMed-2
Medial cerebellar nucleus rostral partipsiMedR-2
Interstitial cell groupsipsiCERIc-2
Locus coeruleusipsiLC0
Parabrachial nucleus ventrolateral partipsiPBveLa3
Midportion of the lateral reticular nucleusipsiMpLRt-2
Parvicellular reticular nucleusipsiPCRt3
Subcoeruleus nucleus dorsal partipsiSubCD-0.5
Paratrigeminal nucleusipsiPa5-0.5
Spinal trigeminal nucleusipsiSp5nc3
Dorsal cochlear nucleus superficial layeripsiDCNsL-2
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract caudal partipsiSolca-2
Nucleus of the solitary tract medial partipsiSolM-2
Nucleus of the solitary tract rostral partipsiSolro-2
Nucleus of the solitary tract rostral poleipsiSolrop-2
Ventral part of the rostral nucleus of the solitary tractipsiSolroV-2
Nucleus of the solitary tract rostrocentralipsiSolroc-2
Raphe nucleiipsiRAN0
Dorsal raphe nucleus rostral partipsiDRr-2
Lateral hypothalamic area perifornical partipsiPFx-2
Peduncular part of lateral hypothalamusipsiPLH-2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-2
Posterior hypothalamic areaipsiPHA-2
Paraventricular hypothalamic nucleusipsiPa-2
Central medial thalamic nucleusipsiCM-2
Lateral group of the dorsal thalamusipsiLAT-2
Posterior thalamic nuclear groupipsiPo-2
Ventro anterior thalamic nucleusipsiVA-2
Ventrolateral thalamic nucleusipsiVL-2
Ventromedial thalamic nucleusipsiVM-2
Parafascicular nucleusipsiPFa-2
Zona incertaipsiZI-2
Basolateral amygdaloid nucleusipsiBL-2
Lateral amygdaloid nucleusipsiLA-2
Bed nucleus of the stria terminalisipsiBST-2
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus lateral divisionipsiCeL-2
Central amygdaloid nucleus medial divisionipsiCeM-2
ClaustrumipsiCl-2
Globus pallidusipsiGP3
Ventral pallidumipsiVP-2
Subthalamic nucleusipsiSTh-2
Piriform cortexipsiPir0
Infralimbic cortexipsiIL-2
Auditory regionsipsiAU0
Insular cortexipsiICX-2
Perirhinal cortexipsiA350
Ectorhinal cortexipsiA360
Motoric regionsipsiM3
Primary somatosensory cortexipsiS10
Central cervical nucleus C1ipsiCeCvC1-2
Cervical segment 2ipsiCS2-2
Central cervical nucleus C2ipsiCeCvC2-2
Spinal cord layer 5 C2ipsiSCL5C2-2
Spinal cord layer 6 C2ipsiSCL6C2-2
Spinal cord layer 7 C2ipsiSCL7C2-2
Cervical segment 3ipsiCS3-2
Central cervical nucleus C3ipsiCeCvC3-2
Spinal cord layer 6 C6ipsiSCL6C6-2
Spinal cord layer 7 C6ipsiSCL7C6-2
Spinal cord layer 6 C7ipsiSCL6C7-2
Spinal cord layer 7 C7ipsiSCL7C7-2
Spinal cord layer 6 C8ipsiSCL6C8-2
Spinal cord layer 7 C8ipsiSCL7C8-2
Spinal cord layer 6 T1ipsiSCL6T1-2
Spinal cord layer 7 T1ipsiSCL7T1-2
Thoracal segment 12ipsiT12-2
Thoracal segment 13ipsiT13-2
Lumbar segment 1ipsiL1-2
Lumbar segment 2ipsiL2-2
Lumbar segment 3ipsiL3-2
Lumbar segment 5ipsiL5-2
Lumbar segment 6ipsiL6-2
Sacral segment 1ipsiSa1-2
Sacral segment 2ipsiSa2-2
Sacral segment 3ipsiSa3-2
Sacral segment 4ipsiSa4-2
Coccygeal segment 1ipsiCo1-2
Coccygeal segment 2ipsiCo2-2
Coccygeal segment 3ipsiCo3-2
Interposed cerebellar nucleicontraICN-2
Lateral cerebellar nucleuscontraCERL-2
Medial cerebellar nucleuscontraMed-2
Midportion of the lateral reticular nucleuscontraMpLRt-2
Dorsal raphe nucleus rostral partcontraDRr-2
Inferior olivecontraIO0
Inferior olive medial nucleus caudal partcontraIOMc-2
Lateral hypothalamic area perifornical partcontraPFx-2
Peduncular part of lateral hypothalamuscontraPLH-2
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-2
Posterior hypothalamic areacontraPHA-2
Paraventricular hypothalamic nucleuscontraPa-2
Spinal cord layer 7 L1contraSCL7L1-2
Spinal cord layer 9 L1contraSCL9L1-2
Spinal cord layer 7 L2contraSCL7L2-2
Spinal cord layer 9 L2contraSCL9L2-2
Spinal cord layer 7 L3contraSCL7L3-2
Spinal cord layer 9 L3contraSCL9L3-2
Spinal cord layer 7 L4contraSCL7L4-2
Spinal cord layer 9 L4contraSCL9L4-2
Lumbar segment 5contraL5-2
Spinal cord layer 7 L5contraSCL7L5-2
Spinal cord layer 9 L5contraSCL9L5-2
Lumbar segment 6contraL6-2
Spinal cord layer 7 L6contraSCL7L6-2
Spinal cord layer 9 L6contraSCL9L6-2
Sacral segment 1contraSa1-2
Sacral segment 2contraSa2-2
Sacral segment 3contraSa3-2
Sacral segment 4contraSa4-2
Coccygeal segment 1contraCo1-2
Coccygeal segment 2contraCo2-2
Coccygeal segment 3contraCo3-2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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