University of Rostock

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Rat connectome



Field CA1 of hippocampus stratum lacunosum-moleculare left


Abbreviation
CA1LM
Color       
Superior regionsField CA1 of hippocampus layer stratum lacunosum moleculare radiatum

SynonymsAbbr.Language
Field CA1 of hippocampus stratum lacunosum-moleculareCA1LMEng

SubregionsSide
Field CA1 of hippocampus layer stratum lacunosumleft
Field CA1 of hippocampus layer stratum moleculareleft
Field CA1 of hippocampus stratum lacunosum-moleculare superficial partleft
Field CA1 of hippocampus stratum lacunosum-moleculare deep partleft
Field CA1 of hippocampus stratum lacunosum-moleculare neuronleft

Output to

NameSideAbbr.WeightDetails
Medial septal nucleusipsiMS0
Field CA1 of hippocampus layer stratum radiatum non-principal cellsipsiCA1L5srnpc1
Field CA1 of hippocampus layer stratum radiatum retrohippocampal neuronsipsiCA1L5srrhn-0.5
Subiculum dorsal partipsiSd-0.5
Retrosplenial dysgranular cortexipsiRSdys1

Input from

NameSideAbbr.WeightDetails
Locus coeruleusipsiLC-0.5
Raphe nucleiipsiRAN3
Median raphe nucleusipsiMnR3
Magnocellular basal forebrain neuronal complexipsiMBFNC-0.5
Medial septum dorsal band complexipsiMSDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Medial septal nucleusipsiMS1
Medial septum dorsal band complex type 1 axon cellsipsiMSDBt1ac2
Reuniens thalamic nucleusipsiRe3
Reuniens thalamic nucleus laterodorsal partipsiReLD3
Anterior basolateral nucleusipsiBLA-0.5
Posterior basolateral nucleusipsiBLP-0.5
Basomedial amygdaloid nucleusipsiBM-0.5
Lateral amygdaloid nucleusipsiLA-0.5
Ventromedial part of the lateral nucleusipsiLaVM4
Central amygdaloid nucleusipsiCe-0.5
Field CA1 of hippocampus layer stratum radiatum retrohippocampal neuronsipsiCA1L5srrhn-0.5
Border CA1 lacunosum-moleculare with L5 stratum radiatumipsiCA1Lb-0.5
Field CA2 of hippocampus layer stratum pyramidale secondary axon of pyramidal cellsipsiCA2L3sapy0
Field CA3a of hippocampus pyramidal cell layer secondary axon of pyramidal cellsipsiCA3aLsapyc0
Entorhinal cortexipsiEnt3
Entorhinal cortex layer 3ipsiEntL3-0.5
Entorhinal cortex layer 3 stellate cellsipsiEntL3SC-0.5
Entorhinal cortex layer 3 pyramidal cellsipsiEntL3py-0.5
Entorhinal cortex layer 2 stellate cellsipsiEntL2SC-0.5
Entorhinal cortex layer 2 pyramidal cellsipsiEntL2py-0.5
Lateral entorhinal cortexipsiLEnt1
Medial entorhinal cortexipsiMEnt3
Medial entorhinal cortex layer 2ipsiMEntLyL23
Medial entorhinal cortex layer 2 stellate neuronsipsiMEntLyL2st1
Medial entorhinal cortex layer 2 pyramidal like cellsipsiMEntLyL2pyL1
Medial entorhinal cortex layer 2 multipolar cellsipsiMEntLyL2mpc1
Medial entorhinal cortex layer 3ipsiMEntLyL33
Medial entorhinal cortex layer 3 pyramidal neurons type 1ipsiMEntLyL3pyT13
Medial entorhinal cortex layer 3 pyramidal neurons type 2ipsiMEntLyL3pyT23
Medial entorhinal cortex layer 3 multipolar cellsipsiMEntLyL3mpc3
Septal regionipsiSER1
Hilus of the dentate gyruscontraHil3
Field CA3 of hippocampus layer stratum pyramidalecontraCA3pyr3
Field CA3 of hippocampus granule cellscontraCA3Lgc3
Entorhinal cortexcontraEnt-0.5
Lateral entorhinal cortexcontraLEnt-0.5
Medial entorhinal cortexcontraMEnt-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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