University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Lateral entorhinal cortex right


Abbreviation
LEnt
Color       
Superior regionsEntorhinal cortex

SynonymsAbbr.Language
 Entl 
Lateral entorhinal area Eng
Lateral part of the entorhinal area Eng
Entorhinal area lateral partENTlEng
 LEAEng
Lateral entorhinal cortexLECEng
Lateral entorhinal cortexLEntEng

SubregionsSide
Lateral entorhinal cortex caudal partright
Lateral entorhinal cortex caudolateral partright
Lateral entorhinal cortex caudomedial partright
Lateral entorhinal cortex central partright
Lateral entorhinal cortex dorsal partright
Lateral entorhinal cortex lateral partright
Lateral entorhinal cortex layersright
Lateral entorhinal cortex medial partright
Lateral entorhinal cortex rostral partright
Lateral entorhinal cortex rostromedial partright
Lateral entorhinal cortex rostroventral partright
Lateral entorhinal cortex ventral partright
Lateral entorhinal cortex ventromedial partright
Area 28Lright
Area 28L'right
Lateral entorhinal cortex intermediate partright
Lateral entorhinal cortex rostrolateral partright
Lateral entorhinal cortex proximal partright
Lateral entorhinal cortex posterior edgeright
Lateral entorhinal cortex dorsolateral partright
Lateral entorhinal cortex intermediate septotemporal partright
Lateral entorhinal cortex anterior partright
Lateral entorhinal cortex distal partright
Lateral entorhinal cortex ventrolateral partright
Lateral entorhinal cortex caudoventral partright

Output to

NameSideAbbr.WeightDetails
Raphe pallidus nucleuscontraRPa4
Nucleus paraventricularis [Periventricular zone anterior region]contraPaPAR2
Posterolateral cortical nucleuscontraPLCo-0.5
Dorsal hippocampuscontraHIPPd3
Dentate gyruscontraDG0.5
Field CA1 of hippocampuscontraCA1-0.5
Field CA1 of hippocampus stratum lacunosum-molecularecontraCA1LM-0.5
Field CA3 of hippocampuscontraCA3-0.5
Field CA3 of hippocampus layer stratum moleculare at septal levelscontraCA3L7smL0
ParasubiculumcontraPaS-0.5
Entorhinal cortexcontraEnt-0.5
Lateral entorhinal cortexcontraLEnt1.5
Medial entorhinal cortexcontraMEnt-0.5
Parietal cortex posterior area lateral portioncontraParPL-0.5
Medial prefrontal cortex layer 1contramPFCL11
Medial prefrontal cortex layer 2contramPFCL21
Secondary visual cortex medial areacontraV2M1
Lateral septal nucleuscontraLS0.5
Interstitial nucleus of CajalipsiInC-0.5
Intermediate reticular nucleusipsiIRt-0.5
Raphe pallidus nucleusipsiRPa2
Endopiriform systemipsiEnN3
Dorsal endopiriform nucleusipsiDEn3
Ventral endopiriform nucleusipsiVEn3
Islands of CallejaipsiICj2.5
Diagonal band of BrocaipsiDBB1
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Medial septal nucleusipsiMS1
Tenia tectaipsiTT-0.5
Dorsal tenia tectaipsiDTT3
Ventral tenia tectaipsiVTT2.5
HypothalamusipsiHYPO1
Lateral hypothalamic areaipsiLH0.5
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Posterior hypothalamic nucleusipsiPH-0.5
Ventromedial hypothalamic nucleusipsiVMH-0.5
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR3
Suprachiasmatic nucleusipsiSCh3
Lateral mammillary nucleusipsiLM0
Mammillary body caudal partipsiCMAMc0
Medial mammillary nucleusipsiMMn0
Premammillary nucleus ventral partipsiPMV0.5
Dorsal thalamusipsiDOR1
Anteromedial thalamic nucleusipsiAM0
Anteroventral thalamic nucleus dorsal partipsiAVDo0
Anteroventral thalamic nucleus ventral partipsiAVv0
Mediodorsal thalamic nucleusipsiMD1
Mediodorsal thalamic nucleus medial partipsiMDM-0.5
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV1
Ventral thalamusipsiVNT0.5
Medial habenular nucleusipsiMHb1
Angular bundleipsiang-2
Ventral bank of the rhinal fissureipsiVBrf-1
Amygdaloid complexipsiAC4
Basal nucleusipsiBnc-0.5
Basolateral amygdaloid nucleusipsiBL3
Anterior basolateral nucleusipsiBLA3
Basolateral nucleus mediodorsal portionipsiBLmD-1
Posterior basolateral nucleusipsiBLP3
Ventral basolateral nucleusipsiBLV-0.5
Basomedial amygdaloid nucleusipsiBM-0.5
Anterior basomedial nucleusipsiBMA2.5
Posterior basomedial nucleusipsiBMP2.5
Lateral amygdaloid nucleusipsiLA3
Ventromedial part of the lateral nucleusipsiLaVM-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus lateral divisionipsiCeL0
Central amygdaloid nucleus medial divisionipsiCeM0
Interstitial nucleus of the posterior limb of the anterior commissureipsiIPAC2
Amygdalopiriform transition areaipsiAPir3
Anterior amygdaloid areaipsiAA3
Anterior cortical amygdaloid nucleusipsiACo2
Posterior amygdaloid nucleusipsiCOAp2
Posterolateral cortical nucleusipsiPLCo3
Nucleus of the lateral olfactory tractipsiLOT2.5
Periamygdaloid complexipsiPAC2.5
Medial half of the periamygdaloid cortexipsiPACmh3
Medial amygdaloid nucleusipsiMe0
Amygdalohippocampal areaipsiAHi-0.5
Posteromedial cortical nucleusipsiPMCo4
Amygdaloid intramedullary grayipsiIMG-0.5
Amygdalostriatal transition areaipsiAStr-0.5
Intercalated massesipsiIM-0.5
Basal gangliaipsiBG4
ClaustrumipsiCl2.5
Anterior part of the claustrumipsiACl1
Accumbens nucleusipsiAc2
Accumbens nucleus coreipsiAcbC-0.5
Medial coreipsiAcbCm-0.5
Lateral accumbens shellipsiAcbShl-0.5
Medial accumbens shellipsiAcbShm3
Ventral striatumipsiCPuv2
HippocampusipsiHIPP-0.5
Hippocampal fissureipsihf1
Dorsal hippocampusipsiHIPPd3
Dentate gyrusipsiDG4
Dentate gyrus rostral partipsiDGr-0.5
Dorsal hippocampus dentate gyrusipsiDDG3
Outer region of the inner molecular layer of the dentate gyrusipsiIMLDGor0.5
Outer molecular layer of the dentate gyrusipsiOML3
Outer third of the molecular layer of the dentate gyrusipsiDGmotL3
Outer two thirds of the molecular layer of the dentate gyrusipsiDGmottL1
Ventral hippocampus dentate gyrusipsiVDG2
Dentate gyrus molecular layeripsiDGmL3
Dentate gyrus molecular layer upper one thirdipsiDGmLuot-0.5
Middle third of the molecular layer of the dentate gyrusipsiDGmmtL-0.5
Granule cell layer of the dentate gyrusipsiDGgL0.5
Hilus of the dentate gyrusipsiHil0.5
Ammon hornipsiAmH3
Field CA1 of hippocampusipsiCA13
Distal field CA1 of hippocampusipsiDCA1-0.5
Distal field CA1 of hippocampus stratum lacunosum-moleculareipsiDCA1sLM-0.5
Field CA1 of hippocampus dorsalipsiCA1d3
Field CA1 of hippocampus layer alveusipsiCA1L1a3
Field CA1 of hippocampus stratum lacunosum-moleculareipsiCA1LM1
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad1
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr1
Field CA1 of hippocampus layer stratum oriensipsiCA1or1
Field CA1 of hippocampus temporal partipsiCA1t-0.5
Field CA1 of hippocampus ventral partipsiCA1v3
Proximal field CA1 of hippocampusipsiPCA11
Mid-proximodistal portion of the field CA1 of the hippocampusipsimpdpCA13
Field CA1 of hippocampus midseptotemporal partipsiCA1mst3
Field CA2 of hippocampusipsiCA22
Field CA2 of hippocampus stratum lacunosum-moleculareipsiCA2LM-0.5
Field CA2 of hippocampus dorsal partipsiCA2D2
Field CA2 of hippocampus ventral partipsiCA2V1
Field CA3 of hippocampusipsiCA33
Field CA3 of hippocampus dorsal partipsiCA3d2
Field CA3 of hippocampus stratum lacunosum-moleculareipsiCA3lm1
Field CA3 of hippocampus layer stratum lacunosum outer halfipsiCA3L6slao-0.5
Field CA3 of hippocampus layer stratum moleculare at septal levelsipsiCA3L7smL-0.5
Field CA3 of hippocampus ventral partipsiCA3v1
Ammon horn layer 1ipsiAmHL1-0.5
Ammon horn layer 4ipsiAmHL4-0.5
Ammon horn layer 5ipsiAmHL5-0.5
SubiculumipsiS3
Subiculum dorsal partipsiSd2
Molecular layer of the subiculumipsiSumo3
Subiculum layer 6ipsiSuL61
Subiculum middle-proximodistal partipsiSmipd3
Subiculum mid-to-distal portionipsiSmitd3
Subiculum proximal partipsiSpx-0.5
Subiculum proximal part layer 1ipsiSpxL1-0.5
Subiculum ventral partipsiSv3
Ventral hippocampusipsiHIPPv-0.5
Alveus of the hippocampusipsialv-2
Fimbriaipsifimb-2
Indusium griseumipsiIG2
PresubiculumipsiPrS2
Presubiculum dorsal partipsiPrD3
Presubiculum layer 1ipsiPrSL13
Presubiculum layer 5ipsiPrSL52
Presubiculum layer 6ipsiPrSL62
Presubiculum ventral partipsiPrSv2
ParasubiculumipsiPaS2.5
Caudal parasubiculumipsiCPaS1
Parasubiculum layer 1ipsiPaSL12
Parasubiculum layer 5ipsiPaSL52
Parasubiculum layer 6ipsiPaSL62
Parasubiculum rostral partipsiPaSR2
PostsubiculumipsiPost2.5
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortexipsiLEnt3
Lateral entorhinal cortex ventral partipsiVLEA4
Lateral entorhinal cortex ventromedial partipsiVMEAL3
Medial entorhinal cortexipsiMEnt1
Medial entorhinal cortex dorsal partipsiMEntD4
Medial entorhinal cortex layer 1ipsiMEntLyL1-0.5
Medial entorhinal cortex layer 2ipsiMEntLyL2-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL3-0.5
Medial entorhinal cortex caudomedial partipsiMEntcm-0.5
Perforant pathwayipsipfp-2
Piriform cortexipsiPir3
Anterior piriform cortexipsiAPIRC3
Posterior piriform cortexipsiPPIRC-0.5
Postpiriform transition areaipsiTR3
Retrosplenial regionsipsiRS0.5
Retrosplenial dorsalipsiRSd0.5
Retrosplenial ventral partipsiRSPv0.5
Retrosplenial agranular cortexipsiRSA1.5
Cingulate cortexipsiCg1
Anterior cingulate cortex layer 2ipsiACCL22
Anterior cingulate cortex layer 6ipsiACCL62
Cingulate cortex area 1 caudal partipsiCg1c1
Cingulate cortex area 1 rostral partipsiCg1r1
Dorsal anterior cingulate cortexipsiDACC2
Ventral anterior cingulate cortexipsiVACC2
Prelimbic cortexipsiPrL3
Prelimbic cortex layer 2ipsiPrLL22
Prelimbic cortex layer 5ipsiPrLL52
Infralimbic cortexipsiIL3
Infralimbic cortex layer 2ipsiILL22
Infralimbic cortex layer 5ipsiILL52
Frontal association cortexipsiFrA2
Parietal association cortexipsiPtA2
Parietal cortex posterior areaipsiParP0.5
Temporal cortexipsiTE2.5
Temporal association cortex 1ipsiTeA-1
Ventral temporal association cortexipsiTev1
Auditory regionsipsiAU1
Primary auditory cortexipsiAu11
Ventral auditory areasipsiAUDv3
Insular cortexipsiICX2
Agranular insular cortex dorsal partipsiAID2.5
Agranular insular cortex dorsal part superficial layersipsiAIDsL1.5
Agranular insular cortex posterior partipsiAIP4
Agranular insular cortex posterior part layer 1ipsiAIPL13
Agranular insular cortex ventral partipsiAIV4
Agranular insular cortex ventral part layer 1ipsiAIVL12
Agranular insular cortex ventral part layer 5ipsiAIVL52
Dysgranular insular cortexipsiDI1
Gustatory dysgranular insular cortexipsiDIg1.5
Visceral dysgranular insular cortexipsiDIv1
Granular insular cortexipsiGI1.5
Perirhinal cortexipsiA354
Ectorhinal cortexipsiA364
Ectorhinal cortex caudal partipsiEctC-0.5
Postrhinal cortexipsiPOR4
Postrhinal cortex layer 1ipsiPORL12
Postrhinal cortex layer 2ipsiPORL22
Postrhinal cortex layer 3ipsiPORL32
Postrhinal cortex layer 4ipsiPORL42
Postrhinal cortex layer 5ipsiPORL52
Postrhinal cortex layer 6ipsiPORL63
Postrhinal cortex ventral borderipsiPoSVb3
Dorsal peduncular cortexipsiDP3
Prefrontal cortexipsiPFC-0.5
Motoric regionsipsiM1
Lateral agranular prefrontal cortexipsiAGl1
Medial prefrontal cortexipsimPFC3
Medial prefrontal cortex layer 1ipsimPFCL13
Medial prefrontal cortex layer 2ipsimPFCL23
Medial agranular prefrontal cortexipsiAGm1
Medial agranular prefrontal cortex rostral partipsirAGm1
Sensory regionsipsiSR1
Primary somatosensory cortexipsiS12
Secondary somatosensory cortexipsiS22.5
Supplemental somatosensory areaipsiSSs1
Visual regionsipsiVR1
Lateral visual cortexipsiLVC0.5
Medial visual cortexipsiMVC0.5
Primary visual cortexipsiV10.5
Primary visual cortex layer 2ipsiV1L21.5
Primary visual cortex layer 6ipsiV1L61.5
Secondary visual cortex medial areaipsiV2M1
Secondary visual cortex lateral areaipsiV2L0.5
Primary visual cortex binocular areaipsiV1B0
Laterolateral cortical visual areaipsiVISll0.5
Mediolateral cortical visual areaipsiVISlm0
Posterolateral cortical visual areaipsiVISpl1
Anteromedial cortical visual areaipsiVISam0
Orbital cortexipsiOrC2
Dorsolateral orbital cortexipsiDLO-0.5
Lateral orbital cortexipsiLO1
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO-0.5
Ventrolateral orbital areaipsiVLO1
Around anterior commissureipsiAac1
Accessory olfactory bulbipsiAOB1
Olfactory bulb A16ipsiMOB4
External plexiform layer of the olfactory bulbipsiOBepl1
Glomerular layer of the olfactory bulbipsiOBglo2
Granular cell layer of the olfactory bulbipsiOBgra1
Olfactory cortex layer 1bipsiONL1b3
Anterior olfactory nucleusipsiAON2.5
Anterior olfactory nucleus medial partipsiAONm-0.5
Olfactory tubercleipsiTuO2.5
Olfactory tubercle lateral partipsiTuOL0.5
Olfactory tubercle medial partipsiTuOMP-0.5
Olfactory tubercle medial edgeipsiTuOMPe3
Septal regionipsiSER2
Lateral septal nucleusipsiLS0.5
Lateral septal nucleus dorsolateral partipsiLSDL-0.5
Lateral septal nucleus intermediate partipsiLSI-0.5
Lateral septal nucleus lateral partipsiLSL-0.5
Lateral septal nucleus intermediolateral partipsiLSiL-0.5
Midline of the septumipsiSERMi-2
Border between medial and lateral septumipsiSERbML2
V-shape area at the border between medial and lateral septumipsiSERVbML4
Stellate ganglionipsiAutoSteG1

Input from

NameSideAbbr.WeightDetails
Locus coeruleuscontraLC-0.5
Reticulotegmental nucleus of the ponscontraRtTg-0.5
Dorsal raphe nucleuscontraDR-0.5
Median raphe nucleuscontraMnR-0.5
Basal forebraincontraBAF0.5
Diagonal band of BrocacontraDBB1
Medial septal nucleuscontraMS1
Substantia innominata anterior partcontraSIA0.5
Substantia innominata posterior partcontraSIP0.5
Magnocellular preoptic nucleuscontraMCPO1
Tuberomammillary nucleuscontraTuM-0.5
Tuberomammillary nucleus dorsomedial partcontraTBMdm1
Ventral tuberomammillary nucleuscontraVTM1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL0.5
PresubiculumcontraPrS0
ParasubiculumcontraPaS0
Lateral entorhinal cortexcontraLEnt1.5
Medial entorhinal cortexcontraMEnt0.5
Anterior piriform cortexcontraAPIRC-0.5
Prepiriform cortexcontraPRPIR0
External tufted cellscontraOcxTL0
Internal tufted cellscontraOBiplit0
Mitral cell layer of the olfactory bulbcontraMi0
Middle tufted cells of the olfactory cortexcontraOcxmit0
Anterior olfactory nucleus central partcontraAONc-0.5
Medial longitudinal fasciculusipsimlf-0.5
Paralemniscal nucleusipsiPL2
Substantia nigra A9ipsiSN0.5
Ventral tegmental area A10ipsiVTA0.5
Locus coeruleusipsiLC-0.5
Nucleus incertus pars compactaipsiNIc1
Nucleus incertus pars dissipataipsiNId0.5
Reticulotegmental nucleus of the ponsipsiRtTg-0.5
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus pontine partipsiDRPo-0.5
Dorsal raphe nucleus rostral partipsiDRr1
Median raphe nucleusipsiMnR-0.5
Median raphe nucleus medial partipsiMnRm-0.5
Pontine raphe nucleusipsiPnR0.5
Raphe magnus nucleusipsiRMg0.5
Basal forebrainipsiBAF3
Caudal part of basal forebrainipsiCBAF0.5
Endopiriform systemipsiEnN3
Caudal endopiriform regionipsiCEn-0.5
Dorsal endopiriform nucleusipsiDEn3
Rostral endopiriform regionipsiREn-0.5
Ventral endopiriform nucleusipsiVEn3
Diagonal band of BrocaipsiDBB2
Nucleus of the diagonal band of Broca dorsal partipsiVDBD-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Nucleus of the horizontal limb of the diagonal band rostral partipsiRPHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Medial septal nucleus medial partipsiMSm-0.5
Middle to caudal parts of the medial septumipsiMSmc-0.5
Substantia innominataipsiSI2
Substantia innominata anterior partipsiSIA1.5
Substantia innominata medial partipsiSIme0
Substantia innominata posterior partipsiSIP1
Magnocellular preoptic nucleusipsiMCPO2
Rostral basal forebrainipsiRBAF3
Tenia tectaipsiTT2
Dorsal tenia tectaipsiDTT2
Ventral tenia tectaipsiVTT1
Tuberomammillary nucleusipsiTuM3
Tuberomammillary nucleus dorsomedial partipsiTBMdm1
Ventral tuberomammillary nucleusipsiVTM2
HypothalamusipsiHYPO1
Dorsal regionipsiDHR-0.5
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0.5
Medial division of the hypothalamusipsiMdH-0.5
Medial zoneipsiMHA0.5
Anterior hypothalamic areaipsiAHA-0.5
Dorsal hypothalamic areaipsiDA-0.5
Posterior hypothalamic areaipsiPHA1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Periventricular hypothalamic nucleusipsiPe0.5
Mammillary bodyipsiCMAM1
Supramammillar nucleus lateral partipsiSuML3
Supramammillar nucleus medial partipsiSuMM1
Dorsal thalamusipsiDOR2
Anterior group of the dorsal thalamusipsiATN1
Anterodorsal thalamic nucleusipsiAD2
Anteromedial thalamic nucleusipsiAM3
Anteroventral thalamic nucleusipsiAV1
Interoanteromedial thalamic nucleusipsiIAM2
Dorsal part of the lateral geniculate complexipsiLGd0.5
Central medial thalamic nucleusipsiCM2
Central medial thalamic nucleus caudal partipsiCMca1
Rhomboid thalamic nucleusipsiRh2
Lateral group of the dorsal thalamusipsiLAT0.5
Medial group of the dorsal thalamusipsiMED1
Mediodorsal thalamic nucleusipsiMD3
Intermediodorsal thalamic nucleusipsiIMD3
Midline group of the dorsal thalamusipsiMTN3
Paratenial thalamic nucleusipsiPT1.5
Paraventricular thalamic nucleusipsiPV2
Paraventricular thalamic nucleus caudal partipsiPVca1
Reuniens thalamic nucleusipsiRe3
Nucleus reuniens rostral division dorsal partipsiRERd3
Ventral group of the dorsal thalamusipsiVENT0.5
Ventrolateral thalamic nucleusipsiVL0.5
Intralaminar nucleiipsiILN0.5
Ventral thalamusipsiVNT1
Reticular thalamic nucleusipsiRt1
Zona incertaipsiZI0.5
EpithalamusipsiEPIT0.5
Dorsal bank of rhinal fissureipsiDBrf1.5
Ventral bank of the rhinal fissureipsiVBrf-1
Ventral bank of the rhinal fissure intermediate partipsiVBrfI-1
Ventral bank of the rhinal fissure rostral partipsiVBrfR2.5
Amygdaloid complexipsiAC3
Anterior basolateral nucleusipsiBLA2.5
Posterior basolateral nucleusipsiBLP3
Ventral basolateral nucleusipsiBLV-0.5
Basomedial amygdaloid nucleusipsiBM2
Anterior basomedial nucleusipsiBMA3
Posterior basomedial nucleusipsiBMP3
Lateral amygdaloid nucleusipsiLA4
Anterior part of the lateral nucleusipsiLAa-0.5
Lateral nucleus caudal two-thirdsipsiLActt0
Posterior part of the lateral nucleusipsiLAP-0.5
Ventrolateral part of the lateral nucleusipsiLaVL4
Ventromedial part of the lateral nucleusipsiLaVM3
Bed nucleus of the stria terminalisipsiBST1.5
Bed nucleus of the stria terminalis medial division posteromedial partipsiBSTMPM-0.5
Central amygdaloid nucleusipsiCe1.5
Medial division of the sublenticular extended amygdalaipsiSLEAm-0.5
Olfactory amygdalaipsiOA2
Amygdalopiriform transition areaipsiAPir3
Anterior amygdaloid areaipsiAA0.5
Cortical amygdaloid nucleusipsiCAn2
Anterior cortical amygdaloid nucleusipsiACo3
Posterior amygdaloid nucleus medial partipsiCOApm2
Posterior amygdaloid nucleusipsiCOAp3
Posterolateral cortical nucleusipsiPLCo3
Nucleus of the lateral olfactory tractipsiLOT2
Nucleus of the lateral olfactory tract layer 2ipsiLOTL21
Periamygdaloid complexipsiPAC-0.5
Medial amygdaloid nucleusipsiMe2
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Medial amygdaloid nucleus anteroventral partipsiMeAV1
Medial amygdaloid nucleus posterodorsal partipsiMePD1
Medial amygdaloid nucleus posteroventral partipsiMePV1
Posteromedial cortical nucleusipsiPMCo3
Basal gangliaipsiBG1
ClaustrumipsiCl3
Anterior part of the claustrumipsiACl2
Dorsal part of claustrumipsiDCl-0.5
Ventral part of claustrumipsiVCl-0.5
Globus pallidusipsiGP0.5
Edge of the globus pallidusipsieGP1.5
Accumbens nucleusipsiAc2.5
Caudate putamenipsiCPu2
Hippocampal regionsipsiHIPPR4
Anterior hippocampal formationipsiAHCf0
Dorsal hippocampusipsiHIPPd2
Dentate gyrusipsiDG2
Dorsal hippocampus dentate gyrusipsiDDG0.5
Ventral hippocampus dentate gyrusipsiVDG1
Field CA1 of hippocampusipsiCA13
Distal field CA1 of hippocampusipsiDCA1-0.5
Most distal part of the field CA1 of hippocampusipsimDCA1-0.5
Field CA1 of hippocampus dorsalipsiCA1d3
Field CA1 of hippocampus ventral partipsiCA1v3
Field CA1 of hippocampus ventral layer stratum pyramidal cellsipsiCA1vL3spc-0.5
Field CA1 of hippocampus adjacent to the dorsal subiculumipsiCA1ads-0.5
Field CA2 of hippocampusipsiCA20
Field CA2 of hippocampus dorsal partipsiCA2D2
Field CA2 of hippocampus ventral partipsiCA2V3
Field CA3 of hippocampusipsiCA31.5
Field CA3 of hippocampus dorsal partipsiCA3d0.5
Field CA3 of hippocampus ventral partipsiCA3v1
SubiculumipsiS3
Subiculum distal partipsiSdi1
Subiculum distal part layer 1ipsiSdiL10
Subiculum distal part layer 2ipsiSdiL20
Subiculum dorsal partipsiSd2
Subiculum dorsal proximal partipsiSdp-0.5
Subiculum proximal partipsiSpx3
Subiculum proximal part layer 1ipsiSpxL1-0.5
Subiculum proximal part layer 5ipsiSpxL5-0.5
Subiculum most proximal partipsiSmpx-0.5
Sepatal subiculum proximal partipsiSsep-0.5
Subiculum septal distal partipsiSsed0
Temporal subiculum proximal part layersipsiSTePL-0.5
Subiculum ventral partipsiSv3
Superficial subiculumipsiSsup3
Ventral hippocampusipsiHIPPv4
Indusium griseumipsiIG0
PresubiculumipsiPrS3
Presubiculum dorsal partipsiPrD0.5
Presubiculum layer 2ipsiPrSL20.5
Presubiculum layer 3ipsiPrSL30.5
Presubiculum deep layersipsiPrSDL0.5
Presubiculum ventral partipsiPrSv2
ParasubiculumipsiPaS4
Caudal parasubiculumipsiCPaS2
Parasubiculum distal partipsiPaSd-0.5
Parasubiculum rostral partipsiPaSR3
PostsubiculumipsiPost4
Entorhinal cortexipsiEnt2
Lateral entorhinal cortexipsiLEnt3
Medial entorhinal cortexipsiMEnt1.5
Medial entorhinal cortex dorsal partipsiMEntD3
Medial sector of layer 3 of the medial entorhinal cortexipsiMEntLyL3ms-2
Entorhinal cortex layer 3ipsiEntL3-2
Entorhinal cortex layer 4ipsiEntL4-2
Entorhinal cortex layer 5ipsiEntL5-2
Entorhinal cortex layer 6ipsiEntL6-2
Entorhinal cortex layer 1ipsiEntL1-2
Entorhinal cortex layer 2ipsiEntL2-2
Entorhinal cortex white matteripsiEntWM-2
Piriform cortexipsiPir4
Anterior piriform cortexipsiAPIRC-0.5
Anterior piriform cortex rostral partipsiAPIRCr-0.5
Anterior piriform cortex caudal partipsiAPIRCC-0.5
Dorsolateral piriform cortexipsiDLPir-0.5
Medial part of the piriform cortexipsiMPir-0.5
Piriform cortex layer 2ipsiPirL22
Piriform cortex layer 2aipsiPirL2a4
Piriform cortex layer 3ipsiPirL30.5
Posterior piriform cortexipsiPPIRC3
Posterior piriform cortex lateral partipsiPPIRCL-0.5
Posterior piriform cortex medial partipsiPPIRCM-0.5
Posterior piriform cortex rostral partipsiPPIRCR-0.5
Posterior piriform cortex caudal partipsiPPIRCC-0.5
Postpiriform transition areaipsiTR3
Retrosplenial dorsalipsiRSd1
Retrosplenial ventral partipsiRSPv1.5
Retrosplenial ventral aipsiRSv-a1
Retrosplenial area ventral part zone b/cipsiRSPv-bc0
Retrosplenial agranular cortexipsiRSA3
Area 29 intermediate rostral partipsiA29ri-0.5
Cingulate cortexipsiCg1
Anterior cingulate cortexipsiACC1
Cingulate cortex area 1 caudal partipsiCg1c0.5
Cingulate cortex area 1 rostral partipsiCg1r0.5
Dorsal anterior cingulate cortexipsiDACC2
Ventral anterior cingulate cortexipsiVACC3
Cingulumipsicg-0.5
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL3
Frontal association cortexipsiFrA2
Parietal association cortexipsiPtA1
Parietal cortex posterior areaipsiParP1
Temporal cortexipsiTE2
Temporal association area 2ipsiTe21
Temporal association area 2 dorsal partipsiTe2D1
Temporal association area 3 dorsocaudal portionipsiTe3dc-0.5
Ventral temporal association cortexipsiTev1
Auditory regionsipsiAU2
Primary auditory cortexipsiAu11
Ventral auditory areasipsiAUDv0.5
Insular cortexipsiICX3
Agranular insular cortex dorsal partipsiAID3
Anterior part of the agranular insular cortex dorsal part layer 2ipsiAAIDL23
Anterior part of the agranular insular cortex dorsal part layer 3ipsiAAIDL33
Anterior part of the agranular insular cortex dorsal part layer 4ipsiAAIDL43
Anterior part of the agranular insular cortex dorsal part layer 5ipsiAAIDL53
Agranular insular cortex posterior partipsiAIP4
Agranular insular cortex ventral partipsiAIV3
Agranular insular cortex ventral part layer 3ipsiAIVL33
Agranular insular cortex ventral part layer 5ipsiAIVL53
Agranular insular cortex ventral part layer 6ipsiAIVL63
Dysgranular insular cortex layer 2ipsiDIL20
Dysgranular insular cortex layer 3ipsiDIL30
Dysgranular insular cortex layer 4ipsiDIL40
Dysgranular insular cortex layer 5ipsiDIL50
Gustatory dysgranular insular cortexipsiDIg1.5
Visceral dysgranular insular cortexipsiDIv1
Granular insular cortexipsiGI0
Parietal granular insular cortex layer 2ipsiGIParL22
Perirhinal cortexipsiA353
Perirhinal cortex anterior portionipsiPRha3
Perirhinal cortex anterior portion layer 5ipsiPRhaL53
Perirhinal cortex anterior portion layer 6ipsiPRhaL63
Perirhinal cortex caudal partipsiPRhc-0.5
Perirhinal cortex layer 1ipsiA35L11.5
Perirhinal cortex deep part of the superficial layer 2ipsiPRhdsL2-0.5
Perirhinal cortex layer 3ipsiA35L32
Deep part of the superficial portion pf perirhinal cortex layer 3ipsiPRhL3ds-0.5
Perirhinal cortex layer 5ipsiA35L52
Perirhinal cortex layer 6ipsiA35L62
Perirhinal cortex rostral partipsiPRro-0.5
Ectorhinal cortexipsiA363
Ectorhinal cortex caudal partipsiEctC-0.5
Ectorhinal cortex rostral partipsiEctR-0.5
Postrhinal cortexipsiPOR2
Postrhinal cortex caudal partipsiPoSC-0.5
Postrhinal cortex layer 1ipsiPORL12
Postrhinal cortex layer 2ipsiPORL22
Postrhinal cortex layer 3ipsiPORL32
Postrhinal cortex layer 4ipsiPORL42
Postrhinal cortex layer 5ipsiPORL52
Postrhinal cortex layer 6ipsiPORL63
Postrhinal cortex ventral borderipsiPoSVb3
Dorsal peduncular cortexipsiDP2
Prefrontal cortexipsiPFC-0.5
Motoric regionsipsiM2
Lateral agranular prefrontal cortexipsiAGl0.5
Medial agranular prefrontal cortexipsiAGm2.5
Primary somatosensory cortexipsiS10.5
Primary somatosensory cortex posteromedial partipsiS1PM-0.5
Secondary somatosensory cortexipsiS20
Supplemental somatosensory areaipsiSSs1
Visual regionsipsiVR1
Lateral visual cortexipsiLVC0.5
Medial visual cortexipsiMVC1
Primary visual cortexipsiV10.5
Secondary visual cortex lateral areaipsiV2L2
Primary visual cortex binocular areaipsiV1B0
Intermediolateral cortical visual areaipsiVISli0
Laterolateral cortical visual areaipsiVISll1.5
Mediolateral cortical visual areaipsiVISlm0
Posterolateral cortical visual areaipsiVISpl1
Rostrolateral cortical visual areaipsiVISrl0
Anteromedial cortical visual areaipsiVISam0
Dorsolateral orbital cortexipsiDLO-0.5
Lateral orbital cortexipsiLO1.5
Lateral orbital cortex layer 2ipsiLOLaL20
Lateral orbital cortex layer 3ipsiLOLaL30
Lateral orbital cortex layer 5ipsiLOLaL50
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO2
Ventral orbital cortex layer 2 lateral portionipsiVOL2L0.5
Ventral orbital cortex layer 2 medial portionipsiVOL2M-0.5
Ventral orbital cortex layer 3 lateral portionipsiVOL3L0.5
Ventral orbital cortex layer 3 medial portionipsiVOL3M-0.5
Ventrolateral orbital areaipsiVLO1.5
Lateral geniculate complexipsiLG0
Medial geniculate nucleusipsiMG0
Accessory olfactory bulbipsiAOB0
Olfactory bulb A16ipsiMOB3
External tufted cellsipsiOcxTL0
Internal tufted cellsipsiOBiplit1
Mitral cell layer of the olfactory bulbipsiMi-0.5
Ventral mitral cell layer of the olfactory bulbipsiMiV-0.5
Middle tufted cells of the olfactory cortexipsiOcxmit0
Anterior olfactory nucleusipsiAON2
Olfactory tubercleipsiTuO2
Septal regionipsiSER1
Lateral septal nucleusipsiLS1.5
Posterior septal complexipsiPSC1.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications