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Rat connectome
Entorhinal cortex layer 3 left
Abbreviation
EntL3
Color
Superior regions
Entorhinal cortex layers
Synonyms
Abbr.
Language
Entorhinal cortex layer 3
EntL3
Subregions
Side
Entorhinal cortex layer 3 stellate cells
left
Entorhinal cortex layer 3 pyramid-like cells
left
Entorhinal cortex layer 3 multipolar cells
left
Entorhinal cortex layer 3 horizontal cells
left
Entorhinal cortex layer 3 pyramidal cells
left
Output to
Name
Side
Abbr.
Weight
Details
Angular bundle
ipsi
ang
-2
External capsule
ipsi
ec
-2
Hippocampus
ipsi
HIPP
3
Dorsal hippocampus
ipsi
HIPPd
1
Hippocampal septal
ipsi
HIPPs
-0.5
Dentate gyrus
ipsi
DG
3
Outer molecular layer of the dentate gyrus
ipsi
OML
-0.5
Outer molecular layer infrapyramidal blade of the dentate gyrus
ipsi
OMLipy
-0.5
Outer molecular layer suprapyramidal blade of the dentate gyrus
ipsi
OMLspy
-0.5
Outer two thirds of the molecular layer of the dentate gyrus
ipsi
DGmottL
-0.5
Granule cells of the granule cell layer of the dentate gyrus
ipsi
GCgc
3
Hilus of the dentate gyrus
ipsi
Hil
-0.5
Field CA1 of hippocampus
ipsi
CA1
3
Field CA1 of hippocampus stratum lacunosum-moleculare
ipsi
CA1LM
-0.5
Field CA1 of hippocampus layer stratum lacunosum
ipsi
CA1L6sla
2
Field CA1 of hippocampus layer stratum moleculare
ipsi
CA1L7sm
3
Field CA1 of hippocampus layer stratum pyramidal cells
ipsi
CA1L3spc
-0.5
Mid-proximodistal portion of the field CA1 of the hippocampus
ipsi
mpdpCA1
3
Field CA1 of hippocampus midseptotemporal part
ipsi
CA1mst
3
Field CA3 of hippocampus
ipsi
CA3
2
Subiculum
ipsi
S
-0.5
Molecular layer of the subiculum
ipsi
Sumo
3
Subiculum mid-to-distal portion
ipsi
Smitd
3
Ventral hippocampus
ipsi
HIPPv
1
Entorhinal cortex layer 5
ipsi
EntL5
-0.5
Entorhinal cortex layer 6
ipsi
EntL6
-0.5
Entorhinal cortex layer 3
ipsi
EntL3
-0.5
Entorhinal cortex layer 4
ipsi
EntL4
-0.5
Entorhinal cortex layer 1
ipsi
EntL1
-0.5
Entorhinal cortex layer 2
ipsi
EntL2
-0.5
Entorhinal cortex rostral part
ipsi
EntRo
-0.5
Entorhinal cortex rostral part layer 1
ipsi
EntRoLa1
-0.5
Entorhinal cortex rostral part layer 2
ipsi
EntRoLa2
1
Entorhinal cortex rostral part layer 3
ipsi
EntRoLa3
3
Lateral entorhinal cortex
ipsi
LEnt
-2
Caudal entorhinal field 1 layer 1
ipsi
CEnt1L1
-0.5
Caudal entorhinal field 1 layer 2
ipsi
CEnt1L2
1
Caudal entorhinal field 1 layer 3
ipsi
CEnt1L3
3
Perforant pathway
ipsi
pfp
-2
Orbital cortex
ipsi
OrC
1
Hippocampus
contra
HIPP
-0.5
Dentate gyrus
contra
DG
1
Subiculum
contra
S
1
Input from
Name
Side
Abbr.
Weight
Details
Endopiriform nucleus layer 2
ipsi
EnNL2
3
Nucleus of the vertical limb of the diagonal band
ipsi
VDB
-0.5
Medial septal nucleus
ipsi
MS
-0.5
Paratenial thalamic nucleus
ipsi
PT
2
Reuniens thalamic nucleus
ipsi
Re
3
Amygdaloid complex
ipsi
AC
1
Basal nucleus
ipsi
Bnc
1
Basal nucleus parvicellular part
ipsi
Bpc
1
Anterior basolateral nucleus
ipsi
BLA
2
Anterior basomedial nucleus
ipsi
BMA
1
Anterior basomedial nucleus outer rim
ipsi
BMAor
1
Anterior cortical amygdaloid nucleus layer 1
ipsi
ACoL1
1
Anterior cortical amygdaloid nucleus layer 2
ipsi
ACoL2
1
Anterior cortical amygdaloid nucleus layer 3
ipsi
ACoL3
1
Medial amygdaloid nucleus
ipsi
Me
1
Dentate gyrus
ipsi
DG
3
Field CA1 of hippocampus
ipsi
CA1
1
Field CA1 of hippocampus septal pole
ipsi
CA1sp
1
Subiculum layer 5
ipsi
SuL5
-0.5
Presubiculum
ipsi
PrS
-0.5
Presubiculum mid-septotemporal part
ipsi
PrSmst
3
Parasubiculum
ipsi
PaS
-0.5
Entorhinal cortex deep layers
ipsi
EntdL
-0.5
Entorhinal cortex layer 5
ipsi
EntL5
-0.5
Entorhinal cortex layer 6
ipsi
EntL6
-0.5
Entorhinal cortex layer 3
ipsi
EntL3
-0.5
Entorhinal cortex layer 4
ipsi
EntL4
-0.5
Entorhinal cortex layer 2
ipsi
EntL2
-0.5
Intermediate entorhinal cortex layer 2b
ipsi
IEntL2b
-2
Dorsolateral entorhinal cortex superficial layers
ipsi
DLEntsL
-0.5
Lateral entorhinal cortex layer 2a
ipsi
LEntL2a
0.5
Lateral entorhinal cortex layer 5
ipsi
LEntL5
-0.5
Medial entorhinal cortex superficial layers
ipsi
MEntLyS
1
Medial entorhinal cortex layer 2b
ipsi
MEntLyL2b
-2
Medial entorhinal cortex layer 3
ipsi
MEntLyL3
-0.5
Medial entorhinal cortex layer 5
ipsi
MEntLyL5
-0.5
Piriform cortex layer 2
ipsi
PirL2
3
Retrosplenial granular cortex layer 5
ipsi
RSGL5
3
Retrosplenial granular cortex layer 6
ipsi
RSGL6
3
Retrosplenial granular cortex layer 1
ipsi
RSGL1
3
Retrosplenial granular cortex layer 2
ipsi
RSGL2
3
Retrosplenial granular cortex layer 3
ipsi
RSGL3
3
Retrosplenial granular cortex layer 4
ipsi
RSGL4
3
Prelimbic cortex
ipsi
PrL
-0.5
Lateromedial part of the lateral extrastriate cortex
ipsi
VISLLM
0.5
Presubiculum mid-septotemporal part
contra
PrSmst
3
Retrosplenial granular cortex layer 5
contra
RSGL5
1.5
Retrosplenial granular cortex layer 6
contra
RSGL6
1.5
Retrosplenial granular cortex layer 1
contra
RSGL1
1.5
Retrosplenial granular cortex layer 2
contra
RSGL2
1.5
Retrosplenial granular cortex layer 3
contra
RSGL3
1.5
Retrosplenial granular cortex layer 4
contra
RSGL4
1.5
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
|
Staff
|
neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
|
Students
|
Links
|
Publications