University of Rostock

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Rat connectome



Primary visual cortex deep layers left


Abbreviation
V1dL
Color       
Superior regionsPrimary visual cortex layers

SynonymsAbbr.Language
Primary visual cortex deep layersV1dLEng
Primary visual cortex deep gray matter layersV1dgLEng

SubregionsSide
Border of layer 5 and 6 of primary visual cortexleft
Primary visual cortex layer 5left
Primary visual cortex layer 6left

Output to

NameSideAbbr.WeightDetails
Midrostrocaudal part of the retrosplenial dysgranular cortexipsiRSdysmrc1
Area 17 area 18a border regioncontraVR1B2a3
Primary visual cortexcontraV13
Primary visual cortex lateral partcontraV1La1
Primary visual cortex deep layerscontraV1dL3
Anteroposterior division of the medial primary visual cortexcontraV1meAP3

Input from

NameSideAbbr.WeightDetails
Dorsal part of the lateral geniculate complexipsiLGd3
Frontal cortex area 2 middle portionipsiFr2mi1
Primary visual cortex layer 2ipsiV1L23
Primary visual cortex layer 3ipsiV1L33
Primary visual cortex layer 5ipsiV1L51
Primary visual cortex layer 6ipsiV1L63
Secondary visual cortex medial area layer 4ipsiV2ML40
Secondary visual cortex medial area layer 3ipsiV2ML30
Secondary visual cortex medial area layer 1ipsiV2ML10
Secondary visual cortex medial area layer 2ipsiV2ML20
Secondary visual cortex medial area layer 5ipsiV2ML50
Secondary visual cortex medial area layer 6ipsiV2ML63
Secondary visual cortex lateral areaipsiV2L3
Secondary visual cortex lateral area layer 2ipsiV2LL22
Secondary visual cortex lateral area layer 3ipsiV2LL32
Secondary visual cortex lateral area layer 6ipsiV2LL63
Deep layers of the lateromedial part of the lateral extrastriate cortexipsiVISLLMd3
Superifical layers of the lateromedial part of the lateral extrastriate cortexipsiVISLLMsL1
RetinacontraRET-0.5
Area 17 area 18a border regioncontraVR1B2a3
Primary visual cortex layer 2contraV1L23
Primary visual cortex layer 3contraV1L33
Primary visual cortex deep layerscontraV1dL3
Primary visual cortex layer 5contraV1L51.5
Primary visual cortex layer 6contraV1L63
Secondary visual cortex medial area layer 4contraV2ML40
Secondary visual cortex medial area layer 3contraV2ML30
Secondary visual cortex medial area layer 1contraV2ML10
Secondary visual cortex medial area layer 2contraV2ML20
Secondary visual cortex medial area layer 5contraV2ML50
Secondary visual cortex lateral area layer 2contraV2LL21
Secondary visual cortex lateral area layer 3contraV2LL31
Secondary visual cortex lateral area layer 5contraV2LL51
Secondary visual cortex lateral area layer 6contraV2LL62

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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