University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Primary somatosensory cortex forelimb region layer 5 right


Abbreviation
S1FL5
Color       
Superior regionsPrimary somatosensory cortex forelimb region layers

SynonymsAbbr.Language
Primary somatosensory cortex forelimb region layer 5S1FL5 

SubregionsSide
Primary somatosensory cortex forelimb region layer 5aright
Primary somatosensory cortex forelimb region layer 5bright
Primary somatosensory cortex forelimb region middle sublayer 5right

Output to

NameSideAbbr.WeightDetails
Trigeminal sensory nuclear complexcontraTSNC0
Cuneate nucleuscontraCu3
Middle part of cuneate nucleuscontraCuM3
Gracile nucleus median partcontraGrm3
Internal basilar nucleus C1contraIBC11
Internal basilar nucleus C2contraIBC21
Internal basilar nucleus C3contraIBC31
Internal basilar nucleus C4contraIBC41
Internal basilar nucleus C5contraIBC51
Internal basilar nucleus C6contraIBC61
Internal basilar nucleus C7contraIBC71
Internal basilar nucleus C8contraIBC81
Internal basilar nucleus T1contraIBT11
Internal basilar nucleus T2contraIBT21
Internal basilar nucleus T3contraIBT31
Internal basilar nucleus T4contraIBT41
Internal basilar nucleus T5contraIBT51
Medial pontine nucleusipsiMPoN3
Red nucleusipsiR0
Superior colliculusipsiSC1
Ventrolateral margint of pontine nucleiipsiPVmLP3
Pontine nuclei caudal partipsiBPNc3
Pontine nuclei lateral partipsiBPNL3
Trigeminal sensory nuclear complexipsiTSNC0
Middle part of cuneate nucleusipsiCuM1
Gracile nucleus median partipsiGrm1
Inferior oliveipsiIO0
Anteroventral thalamic nucleus dorsal partipsiAVDo0
Posterior thalamic nuclear groupipsiPo3
Ventrolateral thalamic nucleus dorsal partipsiVLD0
Central part of the ventrolateral thalamic nucleusipsiVLCe3
Lateral ventroposteromedial thalamic nucleusipsiLVPM3
Reticular thalamic nucleusipsiRt3
Zona incerta ventral partipsiZIV0.5
Anterior pretectal nucleusipsiAPT1
Dorsolateral part of the anterior striatumipsiDLAStri1
Posterior caudate putamenipsiCPup3
Primary somatosensory cortex forelimb region forepawipsiS1FP1.5
Primary somatosensory cortex hindlimb leg regionipsiS1HLLe0.5
Primary visual cortex rostral partipsiV1R2

Input from

NameSideAbbr.WeightDetails
Primary somatosensory cortex forelimb region forepawipsiS1FP2.5
Primary somatosensory cortex hindlimb leg regionipsiS1HLLe1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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