University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinal cord layer 1 Co1 right


Abbreviation
SCL1Co1
Color       
Superior regionsSuperficial dorsal horn Co1

SynonymsAbbr.Language
Spinal cord layer 1 Co1SCL1Co1Eng

Output to

NameSideAbbr.WeightDetails
Intercollicular nucleuscontraInCo-0.5
Superior colliculus intermediate layerscontraSCi-0.5
Superior colliculus deep layerscontraSCd-0.5
Deep mesencephalic nucleuscontraDpMe1
Cuneiforme nucleuscontraCnF3
Lateral parabrachial nucleus lateral partcontraLPBL1
Parabrachial nucleus central lateral partcontraPBCeL1
Parabrachial nucleus dorsolateral partcontraPBDL1
Parabrachial nucleus superior lateralcontraPBSL1
Pretectal regioncontraPRT-0.5
Dorsolateral funiculuscontradlft-2
Lateral funiculuscontralf-2
Parabrachial nucleusipsiPB-0.5
Koelliker Fuse nucleusipsiKF-0.5
Lateral parabrachial nucleus lateral partipsiLPBL1
Parabrachial nucleus central lateral partipsiPBCeL0
Parabrachial nucleus dorsolateral partipsiPBDL0
Parabrachial nucleus superior lateralipsiPBSL0
Nucleus of the solitary tract caudal partipsiSolca-0.5
Biceps femoris musclecontraMuscBF-0.5
Biceps femoris muscleipsiMuscBF-0.5

Input from

NameSideAbbr.WeightDetails
Caudal part of ventral locus coeruleuscontraLCveca0.5
Cuneiforme nucleuscontraCnF-2
HypothalamuscontraHYPO-0.5
Lateral hypothalamic areacontraLH-0.5
Dorsal hypothalamic areacontraDA-0.5
Posterior hypothalamic nucleuscontraPH-0.5
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Caudal hypothalamuscontraHYPOC-0.5
Dorsolateral funiculuscontradlft-2
Cerebral cortexcontraCEC1
Locus coeruleusipsiLC-0.5
Caudal part of ventral locus coeruleusipsiLCveca0.5
Gigantocellular reticular nucleusipsiGi-0.5
HypothalamusipsiHYPO-0.5
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area posterior partipsiLHAp3
Tuberal division of the lateral hypothalamic areaipsiLHTC3
Dorsal hypothalamic areaipsiDA-0.5
Posterior hypothalamic nucleusipsiPH-0.5
Arcuate nucleusipsiArc-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Caudal hypothalamusipsiHYPOC-0.5
Zona incerta rostromedial partipsiZIrm0
Dorsolateral tail nervecontradLatn-0.5
Dorsolateral tail nerveipsidLatn3
Ventrolateral tail nerveipsivLatn3
Tail skinipsiOrgBSTail-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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