University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Thyroid gland left


Abbreviation
OrgThyroid
Color       
Superior regionsEndocrine glands

SynonymsAbbr.Language
Thyroid glandOrgThyroidEng

Output to

NameSideAbbr.WeightDetails
Trigeminal ganglionipsi5Gn1
Dorsal root ganglion C2ipsiDRGC22
Dorsal root ganglion C3ipsiDRGC32
Dorsal root ganglion C4ipsiDRGC42
Dorsal root ganglion C5ipsiDRGC52
Jugular ganglionipsiAutoJG3
Laryngeal ganglionipsiAutoParGLary1

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG2
A5 noradrenaline cellsipsiA52
Magnocellular reticular nucleusipsiNRMC-0.5
C1 adrenaline cellsipsiC11
C3 adrenaline cellsipsiC31
Area postremaipsiAP2
Accessory trigeminal nucleusipsiAcs5-0.5
Nucleus of the solitary tractipsiSol2
Dorsal motor nucleus of vagusipsi103
Raphe nucleiipsiRAN3
Rostral ventrolateral medullaipsiRVLM3
Paragigantocellular reticular nucleusipsiPGi2
Medial preoptic areaipsiMPA-0.5
Dorsomedial hypothalamic nucleusipsiDMHy1
Lateral hypothalamic areaipsiLH2
Anterior hypothalamic areaipsiAHA2
Ventromedial hypothalamic nucleusipsiVMH1
Arcuate nucleusipsiArc2
Paraventricular hypothalamic nucleus dorsal cap [Periventricular zone anterior region]ipsiPaDC-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular nucleus ventromedial parvocellular partipsiPaVMp-0.5
Suprachiasmatic nucleusipsiSCh2
Suprachiasmatic nucleus dorsomedial partipsiSCnDM-0.5
Suprachiasmatic nucleus medial divisionipsiSCnM-0.5
Suprachiasmatic nucleus ventromedial partipsiSChVM-0.5
Suprachiasmatic nucleus rostral partipsiSChR1
Retrochiasmatic areaipsiRCh2
Subfornical organipsiSFO2
Lateral funiculusipsilf2
Bed nucleus of the stria terminalisipsiBST2
Central amygdaloid nucleusipsiCe2
Prefrontal cortexipsiPFC2
Intercalated nucleus of the spinal cordipsiMESic2
Intermediolateral cell columnipsiIML3
Spinal cord lamina 7ipsiMESL71
A5 noradrenaline cellscontraA5-0.5
Area postremacontraAP-0.5
Accessory trigeminal nucleuscontraAcs5-0.5
Nucleus of the solitary tractcontraSol-0.5
Dorsal motor nucleus of vaguscontra10-0.5
Raphe nucleicontraRAN-0.5
Rostral ventrolateral medullacontraRVLM-0.5
Lateral funiculuscontralf-0.5
Intermediolateral cell columncontraIML-0.5
Spinal cord lamina 7contraMESL7-0.5
Intercalated nucleus of the spinal cordcontraMESic-0.5
Stellate ganglionipsiAutoSteG0
Superior cervical ganglionipsiAutoSCeG3
Caudal half of the superior cervical ganglionipsiAutoSCeGCh2
Thoracic sympathetic gangliaipsiAutoTSG0
Jugular ganglionipsiAutoJG1
Laryngeal ganglionipsiAutoParGLary0.5
Thyroid ganglionipsiAutoParGThy3
Nodose ganglionipsiAutoNoG2
Caudal half of the superior cervical ganglioncontraAutoSCeGCh-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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