University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Subcommissural organ left


Abbreviation
SCO
Color       
Superior regionsCircumventricular organs

SynonymsAbbr.Language
Subcommissural organSCOEng

SubregionsSide
Subcommissural organ caudal partleft
Subcommissural organ lateral partleft
Subcommissural organ ventrolateral partleft
Surface of the ependymal lining of the commissural organleft

Input from

NameSideAbbr.WeightDetails
Nucleus incertus pars compactaipsiNIc1
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus median partipsiDRM2
Median raphe nucleusipsiMnR-0.5
Superior central raphe nucleusipsiCS2
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Supraoptic nucleus [Supraoptic region]ipsiSO-0.5
Intergeniculate leafipsiIGL-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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