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Rat connectome



Field CA3c of hippocampus left


Abbreviation
CA3c
Color       
Superior regionsField CA3 of hippocampus

SynonymsAbbr.Language
Field CA3c of hippocampusCA3cEng
CA3 hilar portion Eng

SubregionsSide
Field CA3c of hippocampus infrapyramidal layerleft
Field CA3c of hippocampus pyramidal cellsleft
Field CA3c of hippocampus pyramidal layerleft
Field CA3c of hippocampus stratum lucidumleft
Field CA3c of hippocampus stratum oriensleft
Field CA3c of hippocampus stratum radiatumleft
Field CA3c of hippocampus ventral partleft
Field CA3c of hippocampus inverted fusiform cellsleft

Output to

NameSideAbbr.WeightDetails
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Dentate gyrusipsiDG-0.5
Inner molecular layer of the dentate gyrusipsiIMLDG-0.5
Hilus of the dentate gyrusipsiHil-0.5
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad3
Field CA1 of hippocampus layer stratum oriensipsiCA1or3
Field CA3 of hippocampusipsiCA3-0.5
Field CA3c of hippocampus stratum radiatumipsiCA3crad-0.5
Middle hippocampusipsiHIPPm4
Retrosplenial regionsipsiRS-0.5
Hippocampal formationcontraHIPPP-0.5
Dentate gyruscontraDG-0.5
Inner molecular layer of the dentate gyruscontraIMLDG-0.5
Granule cell layer of the dentate gyruscontraDGgL-1
Hilus of the dentate gyruscontraHil1
Polymorph layer of the hilus of the dentate gyruscontraHilpL-1
Field CA1 of hippocampus layer stratum radiatumcontraCA1rad3
Field CA1 of hippocampus layer stratum orienscontraCA1or1
Field CA1a of hippocampuscontraCA1a-0.5
Field CA1b of hippocampuscontraCA1b-0.5
Field CA1c of hippocampuscontraCA1-c-0.5
Field CA3 of hippocampuscontraCA3-0.5
Field CA3c of hippocampuscontraCA3c1
Field CA3a of hippocampuscontraCA3a0
Field CA3b of hippocampuscontraCA3b1

Input from

NameSideAbbr.WeightDetails
Dentate gyrusipsiDG1
Hilar mossy cellsipsiHilmc-2
Field CA1 of hippocampusipsiCA1-0.5
Field CA2 of hippocampusipsiCA2-0.5
Field CA3 of hippocampusipsiCA3-0.5
Proximal part of field CA3b of hippocampusipsiCA3bp-0.5
Field CA3c of hippocampus ventral partipsiCA3cV-0.5
Field CA4 of hippocampusipsiCA4-0.5
Dentate gyruscontraDG0
Hilus of the dentate gyruscontraHil3
Polymorph layer of the hilus of the dentate gyruscontraHilpL-1
Field CA1a of hippocampuscontraCA1a0
Field CA1b of hippocampuscontraCA1b0
Field CA1c of hippocampuscontraCA1-c-1
Field CA3 of hippocampuscontraCA33
Field CA3c of hippocampuscontraCA3c1
Field CA3a of hippocampuscontraCA3a0
Field CA3b of hippocampuscontraCA3b0
SubiculumcontraS0
Entorhinal cortexcontraEnt0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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