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Rat connectome

Field CA2 of hippocampus left

Abbreviation	CA2
Color
Superior regions	Ammon horn

Synonyms	Abbr.	Language
Field CA2 of hippocampus	CA2	Eng
Ammons horn field CA2
Region II of hipoocampus proper
CA2 field of the hippocampus
Field CA2		Eng

Subregions	Side
Field CA2 of hippocampus lateral part	left
Field CA2 of hippocampus layers	left
Field CA2 of hippocampus NPY neuron population	left
Temporal part of field CA2 of hippocampus	left
Field CA2 of hippocampus septal part	left
Field CA2 of hippocampus dorsal part	left
Field CA2 of hippocampus ventral part	left
Field CA2 of hippocampus rostral part	left
Field CA2 of hippocampus mid portion	left
Field CA2 of hippocampus mid septotemporal portion	left
Field CA2 of hippocampus anterior part	left
Alveus border of field CA2 of hippocampus	left
Field CA2 of hippocampus temporal part	left

Output to

Name	Side	Abbr.	Weight
Paraflocculus ventral part	ipsi	PFlv	1
Flocculus	ipsi	Fl	1
Diagonal band of Broca	ipsi	DBB	0.5
Nucleus of the horizontal limb of the diagonal band	ipsi	HDB	2
Nucleus of the vertical limb of the diagonal band	ipsi	VDB	-0.5
Medial septal nucleus	ipsi	MS	1
Substantia innominata	ipsi	SI	2
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVC	0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVR	0.5
Lateral hypothalamic area juxtadorsomedial region	ipsi	JDM	0
Dorsomedial hypothalamic nucleus anterior part	ipsi	DMA	0
Dorsomedial nucleus posterior part	ipsi	DMHp	0
Posterior hypothalamic area	ipsi	PHA	1
Arcuate nucleus	ipsi	Arc	-0.5
Paraventricular hypothalamic nucleus	ipsi	Pa	0
Suprachiasmatic nucleus	ipsi	SCh	3
Anterior group of the dorsal thalamus	ipsi	ATN	0
Anterodorsal thalamic nucleus	ipsi	AD	0
Anteromedial thalamic nucleus	ipsi	AM	0
Anteroventral thalamic nucleus	ipsi	AV	0
Mediodorsal thalamic nucleus lateral part	ipsi	MDL	-10
Mediodorsal thalamic nucleus medial part	ipsi	MDM	-10
Paratenial thalamic nucleus	ipsi	PT	0
Postcommissural fornix	ipsi	fpc	-2
Basolateral amygdaloid nucleus	ipsi	BL	3
Basomedial amygdaloid nucleus	ipsi	BM	3
Bed nucleus of the stria terminalis	ipsi	BST	1
Central amygdaloid nucleus	ipsi	Ce	3
Posterior amygdaloid nucleus	ipsi	COAp	0
Medial amygdaloid nucleus	ipsi	Me	0.5
Claustrum	ipsi	Cl	0
Striatum	ipsi	STR	-0.5
Hippocampus	ipsi	HIPP	3
Dorsal hippocampus	ipsi	HIPPd	-0.5
Dentate gyrus	ipsi	DG	-0.5
Dentate gyrus molecular layer	ipsi	DGmL	0
Granule cell layer of the dentate gyrus	ipsi	DGgL	0
Hilus of the dentate gyrus	ipsi	Hil	-0.5
Field CA1 of hippocampus	ipsi	CA1	3
Field CA1 of hippocampus dorsal	ipsi	CA1d	-0.5
Field CA1 of hippocampus layer stratum radiatum	ipsi	CA1rad	-0.5
Field CA1 of hippocampus layer deep portion of the stratum radiatum	ipsi	CA1L5srdpo	-0.5
Field CA1 of hippocampus layer stratum oriens	ipsi	CA1or	-0.5
Field CA1 of hippocampus ventral part	ipsi	CA1v	-0.5
Proximal field CA1 of hippocampus	ipsi	PCA1	-0.5
Field CA2 of hippocampus	ipsi	CA2	-0.5
Field CA2 of hippocampus layer deep portion of the stratum radiatum	ipsi	CA2L5srd	-0.5
Field CA2 of hippocampus layer stratum oriens	ipsi	CA2or	-0.5
Field CA3 of hippocampus	ipsi	CA3	-0.5
Distal field CA3 of hippocampus	ipsi	DCA3	-0.5
Field CA3 of hippocampus layer stratum radiatum deep zone	ipsi	CA3Radd	-0.5
Field CA3 of hippocampus layer stratum oriens	ipsi	CA3or	-0.5
Field CA3a of hippocampus layers stratum oriens	ipsi	CA3aLso	-0.5
Field CA3b of hippocampus	ipsi	CA3b	-0.5
Field CA3c of hippocampus	ipsi	CA3c	-0.5
Most proximal part of the field CA3 of hippocampus	ipsi	MPCA3	1
Subiculum	ipsi	S	-0.5
Subiculum dorsal part	ipsi	Sd	3
Molecular layer of the subiculum	ipsi	Sumo	3
Molecular layer of the dentate gyrus	ipsi	Mol	-0.5
Fimbria fornix region	ipsi	fifo	-2
Descending column of the fornix	ipsi	dcf	1
Indusium griseum	ipsi	IG	0
Presubiculum	ipsi	PrS	0
Parasubiculum	ipsi	PaS	1
Entorhinal cortex	ipsi	Ent	4
Lateral entorhinal cortex	ipsi	LEnt	0
Medial entorhinal cortex dorsal part	ipsi	MEntD	0
Postpiriform transition area	ipsi	TR	0.5
Retrosplenial ventral part	ipsi	RSPv	0
Retrosplenial agranular cortex	ipsi	RSA	0
Cingulate cortex area 1 caudal part	ipsi	Cg1c	0
Cingulate cortex area 2 caudal part	ipsi	Cg2c	0
Dorsal anterior cingulate cortex	ipsi	DACC	2
Ventral anterior cingulate cortex	ipsi	VACC	0
Prelimbic cortex	ipsi	PrL	4
Infralimbic cortex	ipsi	IL	1
Parietal cortex posterior area	ipsi	ParP	0
Primary auditory cortex	ipsi	Au1	0
Insular cortex	ipsi	ICX	0.5
Agranular insular cortex dorsal part	ipsi	AID	0
Agranular insular cortex ventral part	ipsi	AIV	0
Perirhinal cortex	ipsi	A35	0
Ectorhinal cortex	ipsi	A36	0
Motoric regions	ipsi	M	0
Lateral agranular prefrontal cortex	ipsi	AGl	0
Medial prefrontal cortex	ipsi	mPFC	1
Medial agranular prefrontal cortex	ipsi	AGm	0
Primary visual cortex	ipsi	V1	0
Secondary visual cortex medial area	ipsi	V2M	0.5
Primary visual cortex binocular area	ipsi	V1B	0
Mediolateral cortical visual area	ipsi	VISlm	0
Anteromedial cortical visual area	ipsi	VISam	0
Lateral orbital cortex	ipsi	LO	0
Ventral orbital cortex	ipsi	VO	0
Ventrolateral orbital area	ipsi	VLO	0
Accessory olfactory bulb	ipsi	AOB	0
Olfactory bulb A16	ipsi	MOB	0
Septal region	ipsi	SER	-0.5
Lateral septal nucleus	ipsi	LS	4
Lateral septal nucleus dorsal part	ipsi	LSD	2
Posterior septal complex	ipsi	PSC	3
Septofimbrial nucleus	ipsi	SFi	3
Triangular septal nucleus	ipsi	TS	1
Rostrolateral part of the septum	ipsi	SERoL	-0.5
Caudoventral septal region	ipsi	CVSER	-0.5
Cervical segment 7	ipsi	CS7	-1
Dorsomedial hypothalamic nucleus anterior part	contra	DMA	3
Dorsomedial nucleus posterior part	contra	DMHp	3
Anterior hippocampal formation	contra	AHCf	2
Dentate gyrus	contra	DG	0
Septal region	contra	SER	-0.5
Lateral septal nucleus	contra	LS	3
Lateral septal nucleus dorsal part	contra	LSD	2
Rostrolateral part of the septum	contra	SERoL	-0.5
Cervical segment 7	contra	CS7	-1

Input from

Name	Side	Abbr.	Weight
Ventral tegmental area A10	ipsi	VTA	-1
Laterodorsal tegmental nucleus	ipsi	LDTg	0.5
Locus coeruleus dorsal part	ipsi	LCD	-0.5
Nucleus incertus pars compacta	ipsi	NIc	0.5
Nucleus incertus pars dissipata	ipsi	NId	2
Subcoeruleus nucleus dorsal part	ipsi	SubCD	2
Dorsal endopiriform nucleus	ipsi	DEn	0
Ventral endopiriform nucleus	ipsi	VEn	0
Medial septal nucleus	ipsi	MS	-0.5
Tuberomammillary nucleus	ipsi	TuM	-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVC	0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]	ipsi	JPVR	0
Lateral hypothalamic area	ipsi	LH	1
Lateral hypothalamic area juxtadorsomedial region	ipsi	JDM	0
Lateral hypothalamic area perifornical part	ipsi	PFx	1
Dorsal hypothalamic area	ipsi	DA	-0.5
Dorsomedial hypothalamic nucleus [Medial zone]	ipsi	DM	1
Dorsomedial hypothalamic nucleus dorsomedial part	ipsi	DMDM	1
Posterior hypothalamic area	ipsi	PHA	1
Supramammillar nucleus	ipsi	SuM	2
Supramammillar nucleus lateral part posterior level	ipsi	SuMLPL	1
Supramammillar nucleus posterior part	ipsi	SuMp	3
Reticular thalamic nucleus	ipsi	Rt	-0.5
Zona incerta	ipsi	ZI	-0.5
Accessory basal nucleus magnocellular division	ipsi	ABm	0
Anterior basolateral nucleus	ipsi	BLA	0
Posterior basolateral nucleus	ipsi	BLP	1
Anterior basomedial nucleus	ipsi	BMA	0
Posterior basomedial nucleus	ipsi	BMP	1
Lateral amygdaloid nucleus	ipsi	LA	0
Ventromedial part of the lateral nucleus	ipsi	LaVM	1
Amygdalopiriform transition area	ipsi	APir	0
Anterior cortical amygdaloid nucleus	ipsi	ACo	0
Posterior amygdaloid nucleus	ipsi	COAp	1
Posterolateral cortical nucleus	ipsi	PLCo	0
Nucleus of the lateral olfactory tract	ipsi	LOT	0
Periamygdaloid complex	ipsi	PAC	1
Periamygdaloid complex medial division	ipsi	PACm	0
Periamygdaloid complex sulcal division	ipsi	PACs	0
Posteromedial cortical nucleus	ipsi	PMCo	0.5
Claustrum	ipsi	Cl	0
Dentate gyrus	ipsi	DG	2
Hilus of the dentate gyrus	ipsi	Hil	-2
Field CA1 of hippocampus	ipsi	CA1	0
Field CA2 of hippocampus	ipsi	CA2	-0.5
Field CA2 of hippocampus layer stratum pyramidale secondary axon of pyramidal cells	ipsi	CA2L3sapy	-0.5
Field CA3 of hippocampus	ipsi	CA3	2
Field CA3a of hippocampus pyramidal cell layer secondary axon of pyramidal cells	ipsi	CA3aLsapyc	-0.5
Subiculum	ipsi	S	0
Subiculum dorsal part	ipsi	Sd	0
Subiculum ventral part	ipsi	Sv	0
Fimbria	ipsi	fimb	1
Indusium griseum	ipsi	IG	0
Presubiculum	ipsi	PrS	0
Parasubiculum	ipsi	PaS	1
Entorhinal cortex	ipsi	Ent	2
Lateral entorhinal cortex	ipsi	LEnt	2
Lateral entorhinal cortex dorsal part layer 5	ipsi	LEntdL5	0.5
Lateral entorhinal cortex dorsal part layer 6	ipsi	LEntdL6	0.5
Lateral entorhinal cortex dorsal part layer 3	ipsi	LEntdL3	0.5
Lateral entorhinal cortex dorsal part layer 4	ipsi	LEntdL4	0.5
Medial entorhinal cortex dorsal part	ipsi	MEntD	2
Medial entorhinal cortex layer 2 stellate neurons	ipsi	MEntLyL2st	-0.5
Piriform cortex	ipsi	Pir	0
Postpiriform transition area	ipsi	TR	0
Retrosplenial ventral part	ipsi	RSPv	0
Retrosplenial ventral a	ipsi	RSv-a	4
Retrosplenial agranular cortex	ipsi	RSA	0
Dorsal anterior cingulate cortex	ipsi	DACC	0
Ventral anterior cingulate cortex	ipsi	VACC	0
Prelimbic cortex	ipsi	PrL	0
Infralimbic cortex	ipsi	IL	0
Temporal cortex	ipsi	TE	0
Auditory regions	ipsi	AU	0
Primary auditory cortex	ipsi	Au1	0
Ventral auditory areas	ipsi	AUDv	0
Agranular insular cortex posterior part	ipsi	AIP	0
Granular insular cortex	ipsi	GI	0
Perirhinal cortex	ipsi	A35	0.5
Ectorhinal cortex	ipsi	A36	2
Motoric regions	ipsi	M	0
Lateral agranular prefrontal cortex	ipsi	AGl	0
Medial agranular prefrontal cortex	ipsi	AGm	0
Primary somatosensory cortex	ipsi	S1	0
Secondary somatosensory cortex	ipsi	S2	0
Primary visual cortex	ipsi	V1	0
Secondary visual cortex lateral area	ipsi	V2L	0
Primary visual cortex binocular area	ipsi	V1B	0
Laterolateral cortical visual area	ipsi	VISll	0
Anteromedial cortical visual area	ipsi	VISam	0
Ventral orbital cortex	ipsi	VO	0
Olfactory bulb A16	ipsi	MOB	0
Nucleus incertus pars dissipata	contra	NId	1
Subcoeruleus nucleus dorsal part	contra	SubCD	1.5
Tuberomammillary nucleus	contra	TuM	-0.5
Lateral hypothalamic area	contra	LH	-0.5
Dorsal hypothalamic area	contra	DA	-0.5
Supramammillar nucleus	contra	SuM	0.5
Supramammillar nucleus posterior part	contra	SuMp	1
Reticular thalamic nucleus	contra	Rt	-0.5
Zona incerta	contra	ZI	-0.5
Hippocampus	contra	HIPP	0
Dentate gyrus	contra	DG	1
Hilus of the dentate gyrus	contra	Hil	-0.5
Field CA1 of hippocampus anterior part	contra	CA1A	1
Field CA3 of hippocampus	contra	CA3	-0.5

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong