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Rat connectome



Subiculum stratum pyramidale left


Abbreviation
Supyr
Color       
Superior regionsSubiculum deep layers

SynonymsAbbr.Language
Subiculum stratum pyramidaleSupyr 
Subiculum layer 4SuL4 
Subiculum stratum pyramidale  
Subicular pyramidal cell layer Eng

SubregionsSide
Subiculum layer 4 pyramidal cellsleft
Subiculum pyramidal cell layer deepleft
Subiculum pyramidal cell layer superficialleft

Output to

NameSideAbbr.WeightDetails
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd4
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv2
Reuniens thalamic nucleusipsiRe3
Medial accumbens shellipsiAcbShm3
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Presubiculum layer 1ipsiPrSL1-0.5
Presubiculum layer 2ipsiPrSL2-0.5
Presubiculum layer 3ipsiPrSL3-0.5
Presubiculum layer 4ipsiPrSL4-0.5
Presubiculum layer 5ipsiPrSL5-0.5
Presubiculum layer 6ipsiPrSL6-0.5
Parasubiculum layer 5ipsiPaSL5-0.5
Parasubiculum layer 6ipsiPaSL6-0.5
Lateral entorhinal cortex layer 2ipsiLEntL2-0.5
Lateral entorhinal cortex layer 3ipsiLEntL3-0.5
Lateral entorhinal cortex layer 5ipsiLEntL5-0.5
Lateral entorhinal cortex layer 6ipsiLEntL6-0.5
Medial entorhinal cortex layer 2ipsiMEntLyL2-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL3-0.5
Medial entorhinal cortex layer 5ipsiMEntLyL5-0.5
Medial entorhinal cortex layer 6ipsiMEntLyL6-0.5
Retrosplenial cortex middle part layer 1ipsiRSmiL1-0.5
Retrosplenial cortex middle part layer 2ipsiRSmiL2-0.5
Retrosplenial cortex middle part layer 3ipsiRSmiL3-0.5
Retrosplenial cortex middle part layer 4ipsiRSmiL4-0.5
Retrosplenial cortex middle part layer 5ipsiRSmiL5-0.5
Retrosplenial cortex middle part layer 6ipsiRSmiL6-0.5
Postrhinal cortex layer 5ipsiPORL5-0.5
Postrhinal cortex layer 6ipsiPORL6-0.5

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv1
Medial amygdaloid nucleus anterodorsal partipsiMeAD2
Polymorph layer of the dentate gyrusipsiDGpo-0.5
Field CA1 of hippocampusipsiCA1-0.5
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad-0.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus layer stratum pyramidal cellsipsiCA1L3spc-0.5
Field CA1 of hippocampus septal partipsiCA1sep-0.5
Superficial subiculumipsiSsup-0.5
Presubiculum layer 3ipsiPrSL3-0.5
Entorhinal cortexipsiEnt-0.5
Perirhinal cortexipsiA351

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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