University of Rostock
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Rat connectome
Alveus of the hippocampus left
Abbreviation
alv
Color
Superior regions
Hippocampus white matter
Synonyms
Abbr.
Language
Alveus of the hippocampus
alv
Eng
Output to
Name
Side
Abbr.
Weight
Details
Diagonal band of Broca
ipsi
DBB
-2
Medial septal nucleus
ipsi
MS
-2
Input from
Name
Side
Abbr.
Weight
Details
Raphe nuclei
ipsi
RAN
-2
Medial septum dorsal band complex
ipsi
MSDB
1
Nucleus of the horizontal limb of the diagonal band intermediate part
ipsi
HDBi
-0.5
Nucleus of the horizontal limb of the diagonal band rostral part
ipsi
RPHDB
-0.5
Nucleus of the vertical limb of the diagonal band
ipsi
VDB
3
Nucleus of the vertical limb of the diagonal band intermediate part
ipsi
VDBi
-0.5
Nucleus of the vertical limb of the diagonal band rostral part
ipsi
VDBR
-0.5
Medial septal nucleus
ipsi
MS
3
Posterior intralaminar thalamic nucleus
ipsi
PIL
0.5
Regio superior of the anterodorsal hippocampal formation
ipsi
HIPPsad
-2
Regio superior of the anteroventral hippocampal formation
ipsi
HIPPRsav
-2
Hilus of the dentate gyrus
ipsi
Hil
-2
Hilar mossy cells
ipsi
Hilmc
-2
Mossy cells in Amarals zone 4
ipsi
HilagrMc
-2
Field CA1 of hippocampus
ipsi
CA1
-0.5
Field CA1 of hippocampus layer stratum radiatum non-principal cells
ipsi
CA1L5srnpc
-2
Field CA1 of hippocampus layer stratum pyramidal cells
ipsi
CA1L3spc
-2
Field CA1 of hippocampus temporal pole
ipsi
CA1tp
-2
CA1 domain 1 pyramidal layer
ipsi
CA1do1py
-0.5
Field CA1 of hippocampus ventral pole
ipsi
CA1vp
-2
Field CA1 of hippocampus septal pole
ipsi
CA1sp
-2
Field CA2 of hippocampus layer stratum secondary axon of commissural fibers of pyramidale pyramidal cells
ipsi
CA2L3scfpy
-2
Field CA3 of hippocampus
ipsi
CA3
-2
Field CA3 of hippocampus layer stratum pyramidale pyramidal neurons
ipsi
CA3L3spy
-2
Field CA3a of hippocampus pyramidal cell layer
ipsi
CA3aLpy
-2
Field CA3a of hippocampus pyramidal cell layer secondary axon from commissural fibers of pyramidal cells
ipsi
CA3aLcfpyc
-2
Subiculum
ipsi
S
-2
Subiculum layer 5
ipsi
SuL5
-2
Subiculum ventral part
ipsi
Sv
-2
Regio inferior of the posterior hippocampal formation
ipsi
HIPPipo
-2
Subicular cortex of the posterior hippocampal formation
ipsi
HIPPspo
-2
Regio inferior of the posterodorsal hippocampal formation
ipsi
HIPPipd
-2
Regio superior of the posterodorsal hippocampal formation
ipsi
HIPPspd
-2
Regio inferior of the posteroventral part of the hippocampal formation
ipsi
HIPPipv
-2
Regio superior of the posteroventral hippocampal formation
ipsi
HIPPspv
-2
Subicular cortex of the posteroventral part of the hippocampal formation
ipsi
HIPPsupv
-2
Presubiculum
ipsi
PrS
-2
Parasubiculum
ipsi
PaS
-2
Entorhinal cortex temporal level
ipsi
EntT
0.5
Intermediate entorhinal cortex
ipsi
IEnt
2
Lateral entorhinal cortex
ipsi
LEnt
-2
Medial entorhinal cortex
ipsi
MEnt
3
Medial entorhinal cortex superficial layers
ipsi
MEntLyS
-2
Medial entorhinal cortex layer 2
ipsi
MEntLyL2
-0.5
Medial entorhinal cortex layer 3
ipsi
MEntLyL3
-0.5
Septal region
ipsi
SER
3
Medial septum dorsal band complex
contra
MSDB
1
Septal region
contra
SER
-0.5
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
|
Staff
|
neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
|
Students
|
Links
|
Publications