University of Rostock

Department of Anatomy

Neuroscience Group

 Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Presubiculum left


Abbreviation
PrS
Color       
Superior regionsSubicular complex

SynonymsAbbr.Language
PresubiculumPREEng
 PREEng
PresubiculumPrSEng
Presubicular cortex Eng
Brodmann area 27BA27Eng

SubregionsSide
Distal protion of the presubiculumleft
Presubiculum caudal partleft
Presubiculum dorsal partleft
Presubiculum layersleft
Presubiculum medial partleft
Presubiculum rostralleft
Presubiculum temporal partleft
Presubiculum ventral partleft
Proximal portion of the presubiculumleft
Septal presubiculumleft
Intermediate presubiculumleft
Presubiculum dorsoventral extentleft
Full septotemporal length of the presubiculumleft
Presubiculum midseptal levelleft
Presubiculum entire proximodistal extentleft
Presubiculum midtemporal levelleft
Presubiculum middle levelsleft
Presubiculum caudolateral partleft

Output to

NameSideAbbr.WeightDetails
Tuberomammillary nucleusipsiTuM-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Anterior hypothalamic areaipsiAHA0
Midlateral posterior hypothalamic areaipsiPHAmL-0.5
Ventral hypothalamic regionipsiVHR-0.5
Lateral mammillary nucleusipsiLM3
Mammillary body caudal partipsiCMAMc0
Medial mammillary nucleusipsiMMn3
Medial mammillary nucleus lateral partipsiML2
Medial mammillary nucleus medial partipsiMM2
Medial mammillary nucleus median partipsiMMnm0
Medial mammillary nucleus posterior partipsiMMNp2
Lateral portion of the pars posterior of the medial mammillary nucleusipsiMMNpL-0.5
Premammillary nucleus ventral partipsiPMV0
Supramammillar nucleusipsiSuM2
Anterior group of the dorsal thalamusipsiATN-0.5
Anterodorsal thalamic nucleusipsiAD2
Anteromedial thalamic nucleusipsiAM-0.5
Anteromedial thalamic nucleus lateral partipsiAML0
Anteroventral thalamic nucleusipsiAV2
Anteroventral thalamic nucleus dorsal partipsiAVDo-0.5
Anteroventral thalamic nucleus lateralmost partipsiAVLm-0.5
Anteroventral thalamic nucleus ventrolateral partipsiAVVL2
Anteroventral thalamic nucleus ventral partipsiAVv0
Lateral group of the dorsal thalamusipsiLAT-0.5
Midline group of the dorsal thalamusipsiMTN2
Reuniens thalamic nucleusipsiRe0.5
Reuniens thalamic nucleus caudomedial divisionipsiRecm2
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl2
Lateral posterior thalamic nucleusipsiLP2
Laterodorsal thalamic nucleusipsiLD3
Reticular thalamic nucleusipsiRt-0.5
Reticular thalamic nucleus dorsomedial partipsiRtdm2
Postcommissural fornixipsifpc3
Posterior basolateral nucleusipsiBLP0
Lateral amygdaloid nucleusipsiLA0
Bed nucleus of the stria terminalisipsiBST2
Bed nucleus of the stria terminalis subcapsular partipsiBSTsuc-0.5
Posterior amygdaloid nucleusipsiCOAp0
Posteromedial cortical nucleusipsiPMCo0
Ventromedial accumbensipsiAcbVM0
Dentate gyrusipsiDG1
Dorsal hippocampus dentate gyrusipsiDDG3
Dentate gyrus molecular layeripsiDGmL3
Middle third of the molecular layer of the dentate gyrusipsiDGmmtL2
Hilus of the dentate gyrusipsiHil1
Ammon hornipsiAmH0
Field CA1 of hippocampusipsiCA1-0.5
Field CA1 of hippocampus dorsalipsiCA1d0
Field CA1 of hippocampus ventral partipsiCA1v0
Field CA2 of hippocampusipsiCA20
Field CA3 of hippocampusipsiCA3-3
SubiculumipsiS2
Subiculum dorsal partipsiSd0
Subiculum ventral partipsiSv1
Alveus of the hippocampusipsialv-2
Indusium griseumipsiIG0
PresubiculumipsiPrS-0.5
ParasubiculumipsiPaS3
PostsubiculumipsiPost2
Entorhinal cortexipsiEnt3
Entorhinal cortex layer 3ipsiEntL3-0.5
Entorhinal cortex layer 4ipsiEntL4-0.5
Entorhinal cortex layer 2ipsiEntL2-0.5
Lateral entorhinal cortexipsiLEnt3
Lateral entorhinal cortex layersipsiLEntL0
Medial entorhinal cortexipsiMEnt2
Medial entorhinal cortex dorsal partipsiMEntD4
Medial entorhinal cortex layer 1ipsiMEntLyL13
Medial entorhinal cortex layer 2ipsiMEntLyL23
Medial entorhinal cortex layer 3ipsiMEntLyL33
Medial entorhinal cortex layer 4ipsiMEntLyL42
Medial entorhinal cortex layer 5ipsiMEntLyL52
Medial entorhinal cortex layer 5aipsiMEntLyL5a1
Medial entorhinal cortex layer 6ipsiMEntLyL62
Medial entorhinal field medial part deep layersipsiMEntFmdL-2
Piriform cortexipsiPir-0.5
Postpiriform transition areaipsiTR0
Retrosplenial regionsipsiRS3
Retrosplenial dorsalipsiRSd0
Dorsal retrosplenial cortex caudal partipsiRSdc-0.5
Retrosplenial ventral partipsiRSPv2
Retrosplenial ventral aipsiRSv-a2
Retrosplenial agranular cortexipsiRSA0
Retrosplenial granular cortexipsiRSGra3
Retrosplenial granular cortex a regionipsiRSGa-0.5
Area 29eipsiA29e-0.5
Periallocortical areaipsiPeriALLO-0.5
Cerebrocortical neuronsipsiCCN-0.5
Cingulate cortex area 1 caudal partipsiCg1c0
Cingulate cortex area 2 caudal partipsiCg2c0
Dorsal anterior cingulate cortexipsiDACC0
Posterior cingulate cortexipsiPCC-1
Prelimbic cortexipsiPrL0
Infralimbic cortexipsiIL1
Parietal association cortexipsiPtA1
Parietal cortex posterior areaipsiParP0
Parietal cortex posterior area medial portionipsimPPC1
Temporal cortexipsiTE-0.5
Primary auditory cortexipsiAu10
Agranular insular cortexipsiAI-0.5
Agranular insular cortex dorsal partipsiAID0
Agranular insular cortex posterior partipsiAIP-0.5
Perirhinal cortexipsiA353
Ectorhinal cortexipsiA363
Motoric regionsipsiM2
Lateral agranular prefrontal cortexipsiAGl0
Medial agranular prefrontal cortexipsiAGm0
Visual regionsipsiVR-0.5
Primary visual cortexipsiV1-1
Secondary visual cortex medial areaipsiV2M-1
Primary visual cortex binocular areaipsiV1B0
Mediolateral cortical visual areaipsiVISlm0
Anteromedial cortical visual areaipsiVISam0
Lateral orbital cortexipsiLO0
Medial orbital cortexipsiMO-0.5
Ventral orbital cortexipsiVO0
Ventrolateral orbital areaipsiVLO0
Accessory olfactory bulbipsiAOB0
Olfactory bulb A16ipsiMOB0
Septal regionipsiSER-0.5
Lateral mammillary nucleuscontraLM3
Anterodorsal thalamic nucleuscontraAD1
Anteroventral thalamic nucleuscontraAV-0.5
Anteroventral thalamic nucleus dorsal partcontraAVDo1
Anteroventral thalamic nucleus ventrolateral partcontraAVVL0
Laterodorsal thalamic nucleuscontraLD0
Reticular thalamic nucleus dorsomedial partcontraRtdm0
Bed nucleus of the stria terminaliscontraBST0
Dentate gyruscontraDG1
SubiculumcontraS2
PresubiculumcontraPrS-0.5
ParasubiculumcontraPaS3
PostsubiculumcontraPost2
Entorhinal cortexcontraEnt3
Lateral entorhinal cortexcontraLEnt0
Medial entorhinal cortex layer 1contraMEntLyL13
Medial entorhinal cortex layer 2contraMEntLyL21
Medial entorhinal cortex layer 3contraMEntLyL33
Medial entorhinal cortex layer 5contraMEntLyL51
Medial entorhinal cortex layer 5acontraMEntLyL5a1
Piriform cortexcontraPir-0.5
Parietal cortex posterior area lateral portioncontraParPL0
Agranular insular cortex posterior partcontraAIP-0.5
Septal regioncontraSER-0.5

Input from

NameSideAbbr.WeightDetails
Paralemniscal nucleusipsiPL1
Dorsal tegmental nucleus lateral partipsiDLTN2
Pedunculopontine tegmental nucleusipsiPPTg2
Locus coeruleusipsiLC1
Nucleus incertus pars compactaipsiNIc0.5
Nucleus incertus pars dissipataipsiNId0.5
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus pontine partipsiDRPo-0.5
Median raphe nucleusipsiMnR-0.5
Ventral part of median raphe nucleusipsiMnRV-0.5
Median raphe nucleus medial partipsiMnRm-0.5
Pontine raphe nucleusipsiPnR0.5
Raphe magnus nucleusipsiRMg0.5
Ventral portion of the raphe nucleiipsiRANV-0.5
Dorsal endopiriform nucleusipsiDEn0
Ventral endopiriform nucleusipsiVEn0
Diagonal band of BrocaipsiDBB-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Medial septal nucleus medial partipsiMSm-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Incerto hypothalamic areaipsiicHYPO1
Medial mammillary nucleus lateral partipsiML2
Posterior mammillay nucleusipsiPMAM2
Supramammillar nucleusipsiSuM1
Supramammillar nucleus lateral partipsiSuML1
Anterior group of the dorsal thalamusipsiATN2.5
Anterodorsal thalamic nucleusipsiAD3
Anterodorsal thalamic nucleus rostral partipsiADR1
Anteromedial thalamic nucleusipsiAM1
Anteromedial thalamic nucleus caudalmost partipsiAMcm1
Anteromedial thalamic nucleus rostral partipsiAMr-0.5
Anteroventral thalamic nucleusipsiAV3
Anteroventral thalamic nucleus magnocellular part rostral partipsiAVmcR1
Anteroventral thalamic nucleus parvicellular part dorsal partipsiAVpaD3
Anteroventral thalamic nucleus rostrodorsal partipsiAVrd-0.5
Dorsal part of the lateral geniculate complexipsiLGd-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus caudal partipsiPVca1
Paraventricular thalamic nucleus dorsal partipsiPVdo1
Paraventricular thalamic nucleus rostral partipsiPVr1
Paraventricular thalamic nucleus ventral partipsiPVV1
Reuniens thalamic nucleusipsiRe3
Caudomedial lateral posterior thalamic nucleusipsiLPcm0
Lateral posterior thalamic nucleus lateral partipsiLPTL0
Rostromedial lateral posterior thalamic nucleusipsiLPrm0.5
Laterodorsal thalamic nucleusipsiLD3
Laterodorsal thalamic nucleus dorsal partipsiLDD1
Laterodorsal thalamic nucleus rostrodorsal partipsiLDrd-0.5
Reticular thalamic nucleusipsiRt3
Medial pretectal nucleusipsiMPT2
Basolateral amygdaloid nucleusipsiBL0
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Basomedial amygdaloid nucleusipsiBM0
Anterior basomedial nucleusipsiBMA0
Posterior basomedial nucleusipsiBMP1
Lateral amygdaloid nucleusipsiLA1
Anterior part of the lateral nucleusipsiLAa-0.5
Posterior part of the lateral nucleusipsiLAP-0.5
Central amygdaloid nucleusipsiCe0
Amygdalopiriform transition areaipsiAPir0
Anterior cortical amygdaloid nucleusipsiACo0
Posterior amygdaloid nucleusipsiCOAp0
Posterolateral cortical nucleusipsiPLCo0
Periamygdaloid complexipsiPAC0
Periamygdaloid complex medial divisionipsiPACm0
Periamygdaloid complex sulcal divisionipsiPACs0
Posteromedial cortical nucleusipsiPMCo0
ClaustrumipsiCl1.5
Rostral part of claustrumipsiRCl3
Dentate gyrusipsiDG1.5
Polymorph layer of the dentate gyrusipsiDGpo-1
Field CA1 of hippocampusipsiCA1-0.5
Field CA1 of hippocampus dorsalipsiCA1d1
Field CA1 of hippocampus dorsal layer stratum oriensipsiCA1dL2so-0.5
Field CA1 of hippocampus dorsal layer stratum radiatumipsiCA1dL5sr-0.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus ventral partipsiCA1v1
Field CA1 of hippocampus ventral layer stratum pyramidal cellsipsiCA1vL3spc-0.5
Field CA2 of hippocampusipsiCA20
Field CA3 of hippocampusipsiCA34
SubiculumipsiS3
Subiculum distal partipsiSdi-0.5
Subiculum dorsal partipsiSd2
Subiculum ventral partipsiSv1
Indusium griseumipsiIG0
PresubiculumipsiPrS-0.5
Presubiculum layer 2ipsiPrSL2-0.5
ParasubiculumipsiPaS3
PostsubiculumipsiPost2.5
Postsubiculum layer 2ipsiPostL21
Postsubiculum layer 5ipsiPostL53
Postsubiculum layer 6ipsiPostL63
Entorhinal cortexipsiEnt-0.5
Entorhinal cortex layer 6ipsiEntL6-2
Entorhinal cortex layer 3 stellate cellsipsiEntL3SC-2
Entorhinal cortex layer 3 pyramidal cellsipsiEntL3py-2
Entorhinal cortex layer 4ipsiEntL4-2
Entorhinal cortex layer 2 stellate cellsipsiEntL2SC-2
Entorhinal cortex layer 2 pyramidal cellsipsiEntL2py-2
Entorhinal cortex rostral part layer 3ipsiEntRoLa31
Entorhinal cortex rostral part layer 4ipsiEntRoLa4-0.5
Entorhinal cortex rostral part layer 5ipsiEntRoLa51
Entorhinal cortex rostral part layer 6ipsiEntRoLa6-0.5
Lateral entorhinal cortexipsiLEnt2
Medial entorhinal cortexipsiMEnt1
Medial entorhinal cortex dorsal partipsiMEntD1
Medial sector of layer II of the medial entorhinal cortexipsiMEntLyL2ms0
Caudal entorhinal field 1 layer 4ipsiCEnt1L4-0.5
Caudal entorhinal field 1 layer 6ipsiCEnt1L61
Piriform cortexipsiPir0
Postpiriform transition areaipsiTR0
Retrosplenial regionsipsiRS2
Retrosplenial dorsalipsiRSd1
Retrosplenial ventral partipsiRSPv3
Retrosplenial ventral aipsiRSv-a3
Retrosplenial area ventral part zone b/cipsiRSPv-bc1
Retrosplenial agranular cortexipsiRSA4
Retrosplenial agranular cortex layer 5ipsiRSAL53
Retrosplenial agranular cortex layer 2ipsiRSAL20.5
Retrosplenial granular cortex a regionipsiRSGa-0.5
Retrosplenial granular a cortex layer 2ipsiRSGa20.5
Retrosplenial granular a cortex layer 5ipsiRSGa53
Retrosplenial granular a cortex middle part layer 2ipsiRSGaMiL2-0.5
Retrosplenial granular a cortex middle part layer 3ipsiRSGaMiL3-0.5
Retrosplenial granular a cortex middle part layer 4ipsiRSGaMiL4-0.5
Retrosplenial granular a cortex middle part layer 5ipsiRSGaMiL5-0.5
Retrosplenial granular a cortex middle part layer 6ipsiRSGaMiL6-0.5
Retrosplenial granular b cortex layer 2ipsiRSGb20.5
Retrosplenial granular b cortex layer 5ipsiRSGb53
Anterior cingulate cortexipsiACC2
Dorsal anterior cingulate cortexipsiDACC2.5
Rostral part of dorsal anterior cingulate cortexipsiDACCR0
Ventral anterior cingulate cortexipsiVACC2.5
Prelimbic cortexipsiPrL1
Infralimbic cortexipsiIL1
Parietal cortex posterior area caudal partipsiParPC3
Temporal cortexipsiTE0.5
Temporal association area 2ipsiTe21
Temporal association area 3 dorsocaudal portionipsiTe3dc-0.5
Caudal part of temporal association cortex 1ipsiTeca-0.5
Dorsal temporal association cortex 1ipsiTed-0.5
Temporal association cortex 1 rostral partipsiTeAr-0.5
Auditory regionsipsiAU1
Primary auditory cortexipsiAu10.5
Ventral auditory areasipsiAUDv0
Agranular insular cortex posterior partipsiAIP1
Agranular insular cortex ventral part layer 3ipsiAIVL31
Agranular insular cortex ventral part layer 5ipsiAIVL51
Agranular insular cortex ventral part layer 6ipsiAIVL61
Visceral dysgranular insular cortexipsiDIv0
Dysgranular insular cortex parietal partipsiDIP0
Granular insular cortexipsiGI0
Granular insular cortex posterior partipsiGIpo0
Parietal granular insular cortexipsiGIPar0.5
Perirhinal cortexipsiA351
Ectorhinal cortexipsiA363
Dorsal peduncular cortexipsiDP1
Motoric regionsipsiM0
Lateral agranular prefrontal cortexipsiAGl0
Medial agranular prefrontal cortexipsiAGm2.5
Medial agranular prefrontal cortex rostral partipsirAGm1
Primary somatosensory cortexipsiS10
Secondary somatosensory cortexipsiS20
Primary visual cortexipsiV11.5
Central primary visual areaipsiV1Ce-0.5
Secondary visual cortex medial areaipsiV2M-1
Secondary visual cortex lateral areaipsiV2L2
Anterolateral area of subdivision 18a in lateral extrastriate cortexipsiALV2L-0.5
Anterior part of the anterolateral area of subdivision 18a in lateral extrastriate cortexipsiALV2La-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortexipsiLMV2L-0.5
Primary visual cortex binocular areaipsiV1B-0.5
Anterior portion of the anterolateral part of the lateral extrastriate cortexipsiVISLaLA3
Laterolateral cortical visual areaipsiVISll1.5
Mediolateral cortical visual areaipsiVISlm2
Anteromedial cortical visual areaipsiVISam1.5
Orbitofrontal cortexipsiOrFCx-0.5
Lateral orbital cortexipsiLO0.5
Lateral orbital cortex layer 2ipsiLOLaL20.5
Lateral orbital cortex layer 3ipsiLOLaL30.5
Lateral orbital cortex layer 5ipsiLOLaL50.5
Lateral orbital cortex layer 6ipsiLOLaL60
Medial orbital cortexipsiMO2
Medial orbital cortex layer 5ipsiMOcxL50.5
Medial orbital cortex layer 2ipsiMOcxL20.5
Medial orbital cortex layer 3ipsiMOcxL30.5
Ventral orbital cortexipsiVO3
Rostral ventral orbital cortexipsiRVO1
Ventral orbital cortex layer 1ipsiVOL13
Ventral orbital cortex layer 2ipsiVOL23
Ventral orbital cortex layer 3ipsiVOL33
Ventral orbital cortex layer 5ipsiVOL53
Ventral orbital cortex layer 6ipsiVOL61
Ventrolateral orbital areaipsiVLO3
Ventrolateral orbital area layer 5ipsiVLOL50.5
Ventrolateral orbital area layer 3ipsiVLOL30.5
Ventrolateral orbital area layer 2ipsiVLOL20.5
Olfactory bulb A16ipsiMOB0
Dorsal tegmental nucleus lateral partcontraDLTN2
Pedunculopontine tegmental nucleuscontraPPTg2
Dorsal raphe nucleuscontraDR2
Median raphe nucleuscontraMnR1
Ventral part of median raphe nucleuscontraMnRV1
Medial mammillary nucleus lateral partcontraML2
Anterior group of the dorsal thalamuscontraATN2
Dentate gyruscontraDG-0.5
PresubiculumcontraPrS-0.5
Presubiculum layer 3contraPrSL3-0.5
Presubiculum layer 4contraPrSL4-0.5
Presubiculum layer 5contraPrSL5-0.5
ParasubiculumcontraPaS3
Parasubiculum layer 3contraPaSL3-0.5
Retrosplenial regionscontraRS-0.5
Parietal cortex posterior area medial portioncontramPPC0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications