University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Cerebral cortex layer 3 left


Abbreviation
CCL3
Color       
Superior regionsSupragranular layers of the neocortex

SynonymsAbbr.Language
Cerebral cortex layer 3CCL3Eng

Output to

NameSideAbbr.WeightDetails
Parafascicular thalamic nucleusipsiPF3
Amygdaloid complexipsiAC-1
Accumbens nucleusipsiAc-1
Caudate putamenipsiCPu-0.5
Dorsolateral striatumipsiCPudl3
Cerebral cortex layer 5ipsiCCL5-0.5
Jaw movement motor cortexipsiJMCx-0.5
Olfactory tubercleipsiTuO-1
ThalamuscontraT1
Parafascicular thalamic nucleuscontraPF3
Dorsolateral striatumcontraCPudl3

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Posterior hypothalamic areaipsiPHA1
Posterior prepiriform cortexipsiPPPC3
Primary somatosensory cortex forelimb regionipsiS1FL3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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