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Rat connectome

Dorsolateral striatum right

Abbreviation	CPudl
Color
Superior regions	Dorsal striatum

Synonyms	Abbr.	Language
Nonlimbic striatum
Dorsolateral striatum	CPudl	Eng
Non-limbic striatum		Eng
Laterodorsal striatum
Laterodorsal caudate putamen		Eng
Non limbic striatum		Eng
Dorsolateral striatum	DLS	Eng
Sensori motor habits region		Eng

Subregions	Side
Dorsolateral striatum central part	right
Dorsolateral striatum chemoarchitectonic compartments	right
Dorsolateral striatum dorsal part	right
Dorsolateral striatum posterior part	right
Dorsolateral striatum ventral part	right
Far dorsolateral striatum	right
Most lateral part of the dorsolateral striatum	right

Output to

Name	Side	Abbr.	Weight
Somatomotoric regions	contra	SMR	1
Caudal forelimb motor area	contra	CFMA	-0.5
Substantia nigra A9	ipsi	SN	2
Substantia nigra reticular part	ipsi	SNR	3
Parafascicular thalamic nucleus	ipsi	PF	3
Globus pallidus	ipsi	GP	3
Lateral globus pallidus	ipsi	LGP	2
Medial globus pallidus	ipsi	MGP	2
Somatomotoric regions	ipsi	SMR	2
Caudal forelimb motor area	ipsi	CFMA	-0.5

Input from

Name	Side	Abbr.	Weight
Lateral cerebellar nucleus	contra	CERL	2
Amygdaloid complex	contra	AC	-0.5
Basolateral amygdaloid nucleus	contra	BL	-0.5
Basolateral nucleus caudal part	contra	BLCP	0
Basolateral nucleus rostral part	contra	BLRP	0
Basomedial amygdaloid nucleus	contra	BM	-0.5
Central amygdaloid nucleus intermediate division	contra	CeI	0
Parietal rhinal cortex	contra	PaRH	1
Cerebrocortical neurons	contra	CCN	2
Supragranular layers of the neocortex	contra	SGLncx	2
Cerebral cortex layer 3	contra	CCL3	3
Deep cortical layer of the cerebral cortex	contra	cytolD	2
Cerebral cortex layer 5	contra	CCL5	3
Cerebral cortex layer 6	contra	CCL6	1
Cingulate cortex area 1	contra	Cg1	0
Cingulate cortex area 2	contra	Cg2	0
Frontal association cortex	contra	FrA	1
Frontal cortex area 1	contra	Fr1	2
Frontal cortex area 1 layer 6	contra	Fr1L6	-0.5
Frontal cortex area 2	contra	Fr2	2
Frontal cortex area 2 layer 6	contra	Fr2L6	-0.5
Frontal cortex area 3	contra	Fr3	2
Parietal association cortex	contra	PtA	1
Parietal cortex area 1	contra	Par1	1
Parietal cortex area 2	contra	Par2	1
Parietal cortex ventral area	contra	ParV	2
Primary auditory cortex layer 5 a	contra	Au1L5a	0.5
Insular cortex layer 5a	contra	ICXL5a	0.5
Somatomotoric regions	contra	SMR	1
Motoric regions	contra	M	1
Lateral prefrontal cortex	contra	lPFC	2
Lateral agranular prefrontal cortex	contra	AGl	3
Forelimb motor cortex	contra	FMCx	2
Caudal forelimb motor area	contra	CFMA	3
Rostral forelimb motor area	contra	RFMA	1
Hindlimb motor cortex	contra	HMCx	2
Whiskers motor cortex layer 5	contra	WMCxL5	1
Whiskers motor cortex layer 6	contra	WMCxL6	1
Medial prefrontal cortex	contra	mPFC	0.5
Motoric regions layer 3	contra	MRL3	1
Motoric regions layer 5	contra	MRL5	1
Sensory regions	contra	SR	2
Primary somatosensory cortex	contra	S1	1
Primary somatosensory cortex barrel field	contra	S1BF	2
Primary somatosensory cortex layer 5	contra	S1L5	1
Primary somatosensory cortex layer 3	contra	S1L3	1
Primary somatosensory cortex forelimb region	contra	S1FL	2
Primary somatosensory cortex hindlimb region	contra	S1HL	2
Central dysgranular zone between E4 whisker and forelimb barrel field layers 5	contra	S1BFcdysL5	-0.5
Central dysgranular zone between E4 whisker and forelimb barrel field layers 6	contra	S1BFcdysL6	-0.5
Secondary somatosensory cortex	contra	S2	2
Posteromedial striate cortex	contra	PMVR	2
Primary visual cortex layer 5 a	contra	V1L5a	0.5
Mesencephalon	ipsi	MEC	-0.5
Peduncularpontine nucleus caudal levels	ipsi	PPNCa	-0.5
Peduncularpontine nucleus rostral part	ipsi	PPNR	-0.5
Substantia nigra caudal part	ipsi	SNcp	-0.5
Substantia nigra compact part	ipsi	SNC	3
Substantia nigra compact part caudal tier	ipsi	SNCC	2
Substantia nigra compact part lateral tier	ipsi	SNCL	2
Substantia nigra compact part lateral third	ipsi	SNCLt	1
Substantia nigra compact part medial tier	ipsi	SNCM	-0.5
Medial third of the substantia nigra compact part	ipsi	SNCMt	-0.5
Substantia nigra compact part medial two-thirds	ipsi	SNCMtt	3
Substantia nigra compact part anteroposterior part	ipsi	SNCap	-0.5
Substantia nigra reticular part	ipsi	SNR	1
Substantia nigra reticular part caudal tier	ipsi	SNRca	2
Caudal substantia nigra reticular lateral region	ipsi	SNRcaLa	2
Substantia nigra reticular part caudal tier medial part	ipsi	SNRcaM	2
Substantia nigra reticular part caudal quarter	ipsi	SNRcq	3
Substantia nigra reticular part medial tier	ipsi	SNRm	0.5
Substantia nigra reticular part peripeduncular part	ipsi	SNRpp	0.5
Ventral tegmental area A10 lateral part	ipsi	VTAL	1
Retrorubral nucleus	ipsi	RR	-0.5
Lateral cerebellar nucleus	ipsi	CERL	2
Dorsal raphe nucleus	ipsi	DR	-0.5
Medial mammillary nucleus	ipsi	MMn	0
Intralaminar nuclei of the dorsal thalamus	ipsi	ILM	3
Central medial thalamic nucleus	ipsi	CM	3
Central medial thalamic nucleus lateral part	ipsi	CMl	3
Centrolateral thalamic nucleus	ipsi	CL	2
Centrolateral thalamic nucleus rostral part	ipsi	CLr	2
Paracentral thalamic nucleus	ipsi	PC	2
Parafascicular thalamic nucleus	ipsi	PF	4
Parafascicular thalamic nucleus dorsal part	ipsi	PFd	-0.5
Parafascicular thalamic nucleus dorsolateral part	ipsi	PFdL	-0.5
Parafascicular thalamic nucleus lateral part	ipsi	PFL	3
Dorsal division of the lateral parafascicular thalamic nucleus	ipsi	PFDL	2.5
Dorsal two thirds of the parafascicular thalamic nucleus lateral part	ipsi	DttPFL	1
Ventral one third of the parafascicular thalamic nucleus lateral part	ipsi	VotPFL	0.5
Parafascicular thalamic nucleus medial part	ipsi	PFM	0.5
Parafascicular thalamic nucleus rostral part	ipsi	PFr	1
Posterior thalamic nuclear group	ipsi	Po	2
Medial part of posterior thalamic nuclear group	ipsi	PoM	3
Posterior thalamic nuclear group medial part	ipsi	PoMe	-0.5
Posteromedial thalamic nuclei caudal part	ipsi	POmc	-0.5
Posterior thalamic nuclear group medial part rostral portion	ipsi	PoMer	0
Midline group of the dorsal thalamus	ipsi	MTN	2
Ventrolateral thalamic nucleus	ipsi	VL	-0.5
Ventral posterolateral thalamic nucleus	ipsi	VPL	2
Ventral posteromedial thalamic nucleus	ipsi	VPM	2
Ethmoid thalamic nucleus	ipsi	Eth	-0.5
Intralaminar nuclei	ipsi	ILN	3
Lateral posterior thalamic nucleus	ipsi	LP	-0.5
Posteromedian thalamic nucleus	ipsi	PoMn	-0.5
Rostrocaudal thalamic nucleus	ipsi	RCT	2
Amygdaloid complex	ipsi	AC	0.5
Basolateral amygdaloid nucleus	ipsi	BL	3
Anterior basolateral nucleus	ipsi	BLA	3
Basolateral nucleus caudal part	ipsi	BLCP	0
Basolateral nucleus rostral part	ipsi	BLRP	0
Basomedial amygdaloid nucleus	ipsi	BM	-0.5
Lateral amygdaloid nucleus	ipsi	LA	0
Central amygdaloid nucleus intermediate division	ipsi	CeI	0
Globus pallidus	ipsi	GP	-0.5
Caudal globus pallidus medial part	ipsi	GPcm	1
Middle part of globus pallidus	ipsi	GPmp	2
Cerebral cortex	ipsi	CEC	-0.5
Parietal rhinal cortex	ipsi	PaRH	2
Cerebrocortical neurons	ipsi	CCN	2
Supragranular layers of the neocortex	ipsi	SGLncx	2
Cerebral cortex layer 3	ipsi	CCL3	3
Deep cortical layer of the cerebral cortex	ipsi	cytolD	2
Cerebral cortex layer 5	ipsi	CCL5	3
Cerebral cortex layer 6	ipsi	CCL6	1
Cingulate cortex area 1	ipsi	Cg1	0
Cingulate cortex area 2	ipsi	Cg2	0
Prelimbic cortex	ipsi	PrL	3
Frontal association cortex	ipsi	FrA	2
Frontal cortex area 1	ipsi	Fr1	3
Frontal cortex area 1 caudal part	ipsi	Fr1c	2
Frontal cortex area 1 layer 6	ipsi	Fr1L6	-0.5
Frontal cortex area 1 layer 2	ipsi	Fr1L2	-0.5
Frontal cortex area 1 layer 3	ipsi	Fr1L3	-0.5
Frontal cortex area 2	ipsi	Fr2	3
Frontal cortex area 2 rostromedial part	ipsi	Fr2rm	2
Frontal cortex area 2 layer 3	ipsi	Fr2L3	-0.5
Frontal cortex area 2 layer 2	ipsi	Fr2L2	-0.5
Frontal cortex area 2 layer 6	ipsi	Fr2L6	-0.5
Frontal cortex area 3	ipsi	Fr3	2
Parietal association cortex	ipsi	PtA	2
Parietal cortex area 1	ipsi	Par1	3
Parietal cortex area 2	ipsi	Par2	2
Parietal cortex ventral area	ipsi	ParV	3
Primary auditory cortex layer 5 a	ipsi	Au1L5a	1
Insular cortex layer 5a	ipsi	ICXL5a	1
Somatomotoric regions	ipsi	SMR	3
Motoric regions	ipsi	M	2
Lateral prefrontal cortex	ipsi	lPFC	2
Lateral agranular prefrontal cortex	ipsi	AGl	4
Forelimb motor cortex	ipsi	FMCx	3
Caudal forelimb motor area	ipsi	CFMA	3
Rostral forelimb motor area	ipsi	RFMA	2
Hindlimb motor cortex	ipsi	HMCx	3
Medial prefrontal cortex	ipsi	mPFC	1
Motoric regions layer 5	ipsi	MRL5	3
Motoric regions layer 6	ipsi	MRL6	2
Motoric regions layer 4	ipsi	MRL4	2
Medial agranular prefrontal cortex	ipsi	AGm	2
Sensory regions	ipsi	SR	4
Primary somatosensory cortex	ipsi	S1	4
Primary somatosensory cortex barrel field	ipsi	S1BF	3
Anterolateral barrel subfield	ipsi	ALBSF	3
Posteromedial barrel subfield	ipsi	PMBSF	3
Posteromedial barrel subfield C2	ipsi	PMBSFC2	3
Posteromedial barrel subfield D1	ipsi	PMBSFD1	3
Posteromedial barrel subfield D2	ipsi	PMBSFD2	3
Posteromedial barrel subfield D5	ipsi	PMBSFD5	3
Primary somatosensory cortex barrel field layer 5	ipsi	S1BF5	3
Primary somatosensory cortex barrel field dysgranular zone	ipsi	S1BFdg	3
Primary somatosensory cortex jaw region	ipsi	S1J	3
Primary somatosensory cortex layer 5	ipsi	S1L5	3
Primary somatosensory cortex layer 6	ipsi	S1L6	2
Primary somatosensory cortex layer 4	ipsi	S1L4	2
Primary somatosensory cortex forelimb region	ipsi	S1FL	2
Primary somatosensory cortex forelimb stump representation	ipsi	S1FLS	3
Primary somatosensory cortex hindlimb region	ipsi	S1HL	2
Central dysgranular zone between E4 whisker and forelimb barrel field layers 5	ipsi	S1BFcdysL5	3
Central dysgranular zone between E4 whisker and forelimb barrel field layers 6	ipsi	S1BFcdysL6	3
Secondary somatosensory cortex	ipsi	S2	4
Posteromedial striate cortex	ipsi	PMVR	3
Primary visual cortex layer 5 a	ipsi	V1L5a	1
Orbitofrontal cortex	ipsi	OrFCx	3

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong