University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Cerebral cortex layer 6 left


Abbreviation
CCL6
Color       
Superior regionsDeep cortical layer of the cerebral cortex

SynonymsAbbr.Language
Cerebral cortex layer 6CCL6Eng

SubregionsSide
Cerebral cortex layer 6aleft
Cerebral cortex layer 6bleft

Output to

NameSideAbbr.WeightDetails
ThalamusipsiT3
Posterior thalamic nuclear groupipsiPo-0.5
Reticular thalamic nucleusipsiRt3
Amygdaloid complexipsiAC-1
Accumbens nucleusipsiAc-1
Dorsolateral striatumipsiCPudl1
Olfactory tubercleipsiTuO-1
Dorsolateral striatumcontraCPudl1

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Ventral posterolateral thalamic nucleusipsiVPL0
Ventral posteromedial thalamic nucleusipsiVPM0
Ethmoid thalamic nucleusipsiEth-0.5
Primary somatosensory cortex forelimb regionipsiS1FL2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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